RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 ZNF513Q8N8E2 541 aaPredicted RBP5.33□□□□□ -1.56
CAST-242ENST00000515063 NETO2Q8NC67 525 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 USP33Q8TEY7 942 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 COPS5Q92905 334 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 CCDC140Q96MF4 163 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 GMLQ99445 158 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 IRF2BPLQ9H1B7 796 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 NKX2-4Q9H2Z4 354 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 ZNF408Q9H9D4 720 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 CYP26B1Q9NR63 512 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 ABCA5Q8WWZ7 1642 aa5.33□□□□□ -1.56
CAST-242ENST00000515063 LRRC9Q6ZRR7 1453 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 FYCO1Q9BQS8 1478 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 KIF21AQ7Z4S6 1674 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 TACR1P25103 407 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 ETFBP38117 255 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 CDR1P51861 262 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 SLC9A5Q14940 896 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 MCF2L2Q86YR7 1114 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 PEX11GQ96HA9 241 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 MRGPRX3Q96LB0 322 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 MMP19Q99542 508 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 KRTAP9-9Q9BYP9 154 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 RNF38Q9H0F5 515 aa5.32□□□□□ -1.56
CAST-242ENST00000515063 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.32□□□□□ -1.56
CAST-242ENST00000515063 DHX57Q6P158 1386 aaKnown RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 TTBK1Q5TCY1 1321 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 THOC2Q8NI27 1593 aaKnown RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 F8W031 263 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 IRS4O14654 1257 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 ZBTB7AO95365 584 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 CPP00450 1065 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 CENPBP07199 599 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 GLI4P10075 376 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 PLS3P13797 630 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 PI3P19957 117 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 HOXC12P31275 282 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 EPHB3P54753 998 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 ZC3H6P61129 1189 aaKnown RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 ZNF200P98182 395 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 KCNAB2Q13303 367 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 E4F1Q66K89 784 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 CNKSR3Q6P9H4 555 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 CPNE8Q86YQ8 564 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 CLEC1BQ9P126 229 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 FAN1Q9Y2M0 1017 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 PCDHA5Q9Y5H7 936 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 ARID1BQ8NFD5 2236 aaPredicted RBP5.31□□□□□ -1.56
CAST-242ENST00000515063 FMN1Q68DA7 1419 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 CASKIN1Q8WXD9 1431 aa5.31□□□□□ -1.56
CAST-242ENST00000515063 SAMD9Q5K651 1589 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 MYO1BO43795 1136 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 BUB1BO60566 1050 aaPredicted RBP5.3□□□□□ -1.56
CAST-242ENST00000515063 SNRPB2P08579 225 aaKnown RBP5.3□□□□□ -1.56
CAST-242ENST00000515063 GTF2A2P52657 109 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 SSPNQ14714 243 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 WWC2Q6AWC2 1192 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 LCNL1Q6ZST4 164 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 ZNF227Q86WZ6 799 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 DCP2Q8IU60 420 aaKnown RBP5.3□□□□□ -1.56
CAST-242ENST00000515063 TSPAN17Q96FV3 270 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 GULP1Q9UBP9 304 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 RAPGEFL1Q9UHV5 662 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 RWDD3Q9Y3V2 267 aa5.3□□□□□ -1.56
CAST-242ENST00000515063 PCF11O94913 1555 aaKnown RBP5.29□□□□□ -1.56
CAST-242ENST00000515063 IRS2Q9Y4H2 1338 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 URB2Q14146 1524 aaKnown RBP5.29□□□□□ -1.56
CAST-242ENST00000515063 RAD54L2Q9Y4B4 1467 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 C7orf72A4D263 438 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 IQCA1LA6NCM1 817 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 B2RBV5 119 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 MEFVO15553 781 aaPredicted RBP5.29□□□□□ -1.56
CAST-242ENST00000515063 GJB6O95452 261 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 ITGAVP06756 1048 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 THBDP07204 575 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 NCAM1P13591 858 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 AFF3P51826 1226 aaKnown RBP5.29□□□□□ -1.56
CAST-242ENST00000515063 RPL11P62913 178 aaKnown RBP5.29□□□□□ -1.56
CAST-242ENST00000515063 PRR5P85299 388 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 ANKS3Q6ZW76 656 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 IGDCC3Q8IVU1 814 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 BTN2A2Q8WVV5 523 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 ALG3Q92685 438 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 AP5M1Q9H0R1 490 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 IGSF5Q9NSI5 407 aa5.29□□□□□ -1.56
CAST-242ENST00000515063 GAPVD1Q14C86 1478 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 NESP48681 1621 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 TARBP1Q13395 1621 aaKnown RBP5.28□□□□□ -1.56
CAST-242ENST00000515063 ZC3H12DA2A288 527 aaKnown RBP5.28□□□□□ -1.56
CAST-242ENST00000515063 STK10O94804 968 aaKnown RBP5.28□□□□□ -1.56
CAST-242ENST00000515063 SCG5P05408 212 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 ECI1P42126 302 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 KCNJ6P48051 423 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 DDR2Q16832 855 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 ACBD5Q5T8D3 534 aaPredicted RBP5.28□□□□□ -1.56
CAST-242ENST00000515063 FAM129CQ86XR2 697 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 DIO2Q92813 273 aa5.28□□□□□ -1.56
CAST-242ENST00000515063 DACT3Q96B18 629 aaPredicted RBP5.28□□□□□ -1.56
CAST-242ENST00000515063 MTA3Q9BTC8 594 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms