RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 TSPAN17Q96FV3 270 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 AKT3Q9Y243 479 aa6.31□□□□□ -1.4
CDC42BPA-212ENST00000478573 NPHS1O60500 1241 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 PPP1R11O60927 126 aaPredicted RBP6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 KCNH1O95259 989 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 FUCA1P04066 466 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 GJA8P48165 433 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 HTRA3P83110 453 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 GRB10Q13322 594 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 GNL2Q13823 731 aaKnown RBP6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 DBX2Q6ZNG2 339 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 ARHGEF39Q8N4T4 335 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 NETO2Q8NC67 525 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 RASGRP4Q8TDF6 673 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 DRC1Q96MC2 740 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 GMLQ99445 158 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 BTG4Q9NY30 223 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 CLEC1BQ9P126 229 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 APEX2Q9UBZ4 518 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 JAG2Q9Y219 1238 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 SIT1Q9Y3P8 196 aa6.3□□□□□ -1.4
CDC42BPA-212ENST00000478573 TRBV23OR9-2A0A075B6M9 112 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 C7orf72A4D263 438 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 NTRK1P04629 796 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 CARFQ8N187 725 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 DDX1Q92499 740 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 RCC1LQ96I51 464 aaKnown RBP6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 SHDQ96IW2 340 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 NOX5Q96PH1 765 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 MTA3Q9BTC8 594 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 CAPN10Q9HC96 672 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 GPRC5CQ9NQ84 441 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 MARCH2Q9P0N8 246 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 USP35Q9P2H5 1018 aa6.29□□□□□ -1.4
CDC42BPA-212ENST00000478573 SH3D21A4FU49 640 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 ANKRD34BA5PLL1 514 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 ADRB1P08588 477 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 PLS3P13797 630 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 SCRN1Q12765 414 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 SMAD4Q13485 552 aaKnown RBP6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 SLC9A5Q14940 896 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 ZBTB8AQ96BR9 441 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 ANAPC16Q96DE5 110 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 DDX11Q96FC9 970 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 INPP5FQ9Y2H2 1132 aa6.28□□□□□ -1.4
CDC42BPA-212ENST00000478573 ZBTB7AO95365 584 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 CNR2P34972 360 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 GJA9P57773 515 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 KRTAP10-2P60368 255 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 NFKB2Q00653 900 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 DLX2Q07687 328 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 CACNB2Q08289 660 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 MBLAC2Q68D91 279 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 POMZP3Q6PJE2 187 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 CRACR2BQ8N4Y2 399 aaPredicted RBP6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 FAM169BQ8N8A8 192 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 APBA2Q99767 749 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 LGR4Q9BXB1 951 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 NTMQ9P121 344 aa6.27□□□□□ -1.41
CDC42BPA-212ENST00000478573 K7ESM1 405 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 NOP56O00567 594 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 SMARCA5O60264 1052 aaPredicted RBP6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 CYP2C8P10632 490 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 SARSP49591 514 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 SPATS1Q496A3 300 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 GGNQ86UU5 652 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 DCP2Q8IU60 420 aaKnown RBP6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 TEX2Q8IWB9 1127 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 UBXN4Q92575 508 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 ARMC5Q96C12 935 aa6.26□□□□□ -1.41
CDC42BPA-212ENST00000478573 THBDP07204 575 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 NAT2P11245 290 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 CASP7P55210 303 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 ZNF513Q8N8E2 541 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 BVESQ8NE79 360 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 CPA5Q8WXQ8 436 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 BORCS6Q96GS4 357 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 TANGO6Q9C0B7 1094 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 AP5M1Q9H0R1 490 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 SPATA6Q9NWH7 488 aaPredicted RBP6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 EMC9Q9Y3B6 208 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 DUSP10Q9Y6W6 482 aa6.25□□□□□ -1.41
CDC42BPA-212ENST00000478573 NOBOXO60393 691 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 C8BP07358 591 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 ARID5AQ03989 594 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 EFEMP1Q12805 493 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 ZFYVE27Q5T4F4 411 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 GTF2IRD2BQ6EKJ0 949 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 CD300LDQ6UXZ3 194 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 ETV3LQ6ZN32 361 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 GTF2IRD2Q86UP8 949 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 VPS37DQ86XT2 251 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 SYT3Q9BQG1 590 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 ABCC9O60706 1549 aa6.24□□□□□ -1.41
CDC42BPA-212ENST00000478573 C22orf46C9J442 243 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 FGRP09769 529 aa6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 ATF4P18848 351 aaPredicted RBP6.23□□□□□ -1.41
CDC42BPA-212ENST00000478573 FPR2P25090 351 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 103.3 ms