RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 GPATCH3Q96I76 525 aa22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 UBE2ZQ9H832 354 aaPredicted RBP22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 SCN10AQ9Y5Y9 1956 aa22.44■■□□□ 1.18
NCKIPSD-209ENST00000470006 NKRFO15226 690 aaKnown RBP eCLIP22.43■■□□□ 1.18
NCKIPSD-209ENST00000470006 WDR5P61964 334 aaKnown RBP22.43■■□□□ 1.18
NCKIPSD-209ENST00000470006 PTPN11Q06124 597 aaPredicted RBP22.43■■□□□ 1.18
NCKIPSD-209ENST00000470006 PPARAQ07869 468 aa22.43■■□□□ 1.18
NCKIPSD-209ENST00000470006 LRRFIP1Q32MZ4 808 aaKnown RBP22.43■■□□□ 1.18
NCKIPSD-209ENST00000470006 RASGRP2Q7LDG7 609 aa22.43■■□□□ 1.18
NCKIPSD-209ENST00000470006 RBM47A0AV96 593 aaKnown RBP22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 PRR33A8MZF0 331 aa22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 NFIBO00712 420 aa22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 KCNA5P22460 613 aa22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 SLC16A2P36021 539 aa22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 SCFD2Q8WU76 684 aa22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 COPS5Q92905 334 aa22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 CHMP4BQ9H444 224 aaKnown RBP22.42■■□□□ 1.18
NCKIPSD-209ENST00000470006 PTPRSQ13332 1948 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 LOC102724159A0A0B4J2E5 919 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 NMT2O60551 498 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 PWP2Q15269 919 aaKnown RBP22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 TSHZ3Q63HK5 1081 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 FAM117BQ6P1L5 589 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 CAGE1Q8TC20 777 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 AFAP1L1Q8TED9 768 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 TGS1Q96RS0 853 aaKnown RBP22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 SUGCTQ9HAC7 445 aa22.41■■□□□ 1.18
NCKIPSD-209ENST00000470006 TXNP10599 105 aaKnown RBP22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 DEFB103AP81534 67 aa22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 TTBK2Q6IQ55 1244 aa22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 SLC30A10Q6XR72 485 aa22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 RNF207Q6ZRF8 634 aa22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 FAM178BQ8IXR5 827 aa22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 RANBP17Q9H2T7 1088 aaKnown RBP22.4■■□□□ 1.18
NCKIPSD-209ENST00000470006 A6NJR5 290 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 RANBP6O60518 1105 aaKnown RBP22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 ALADP13716 330 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 SYDE2Q5VT97 1194 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 CNKSR3Q6P9H4 555 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 DCAF4Q8WV16 495 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 SEC62Q99442 399 aaKnown RBP22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 RAD9AQ99638 391 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 IL17RBQ9NRM6 502 aa22.39■■□□□ 1.17
NCKIPSD-209ENST00000470006 B4DLN1 442 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 SELPP16109 830 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 MRPL12P52815 198 aaKnown RBP22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 CTDSPL2Q05D32 466 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 LEXMQ3ZCV2 418 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 PTCRAQ6ISU1 281 aaPredicted RBP22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 LRRC8DQ7L1W4 858 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 GPCPD1Q9NPB8 672 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 INCENPQ9NQS7 918 aa22.38■■□□□ 1.17
NCKIPSD-209ENST00000470006 FRMPD2Q68DX3 1309 aaPredicted RBP22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 IL9P15248 144 aa22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 MRE11P49959 708 aa22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 ERVK-21P61565 698 aa22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 GDF6Q6KF10 455 aaPredicted RBP22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.37■■□□□ 1.17
NCKIPSD-209ENST00000470006 LINC01553A4QN01 128 aa22.36■■□□□ 1.17
NCKIPSD-209ENST00000470006 GJB5O95377 273 aa22.36■■□□□ 1.17
NCKIPSD-209ENST00000470006 EP400NLQ6ZTU2 488 aa22.36■■□□□ 1.17
NCKIPSD-209ENST00000470006 ABHD14A-ACY1A0A1B0GW23 586 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 PARNO95453 639 aaKnown RBP22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 RPS6P62753 249 aaKnown RBP22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 IKBKEQ14164 716 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 CHST3Q7LGC8 479 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 FBXO22Q8NEZ5 403 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 AFG1LQ8WV93 481 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 TOMM22Q9NS69 142 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 SIP14410 1827 aa22.35■■□□□ 1.17
NCKIPSD-209ENST00000470006 DNERQ8NFT8 737 aa22.34■■□□□ 1.17
NCKIPSD-209ENST00000470006 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
NCKIPSD-209ENST00000470006 FSD1Q9BTV5 496 aa22.34■■□□□ 1.17
NCKIPSD-209ENST00000470006 NBNO60934 754 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 EFCAB14O75071 495 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 ARIH2O95376 493 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 CKBP12277 381 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 GPNMBQ14956 572 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 PUS10Q3MIT2 529 aaKnown RBP22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 BTNL9Q6UXG8 535 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 SEPT14Q6ZU15 432 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 C7orf31Q8N865 590 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 PNMA2Q9UL42 364 aa22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 DDX52Q9Y2R4 599 aaKnown RBP eCLIP22.33■■□□□ 1.17
NCKIPSD-209ENST00000470006 GRXCR2A6NFK2 248 aa22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 H3BQ06 376 aaPredicted RBP22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 MMP3P08254 477 aa22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 CASTP20810 708 aaKnown RBP22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 DHX38Q92620 1227 aaKnown RBP22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 C17orf80Q9BSJ5 609 aa22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 ALG1Q9BT22 464 aa22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 CTNNA3Q9UI47 895 aa22.32■■□□□ 1.16
NCKIPSD-209ENST00000470006 DCXO43602 365 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 GH1P01241 217 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 CXCL10P02778 98 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 EDNRBP24530 442 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 PTPROQ16827 1216 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 LY6KQ17RY6 165 aa22.31■■□□□ 1.16
NCKIPSD-209ENST00000470006 TCTN1Q2MV58 587 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms