RNA–Protein interactions for RNA: ENST00000469043.1

SCFD1-205, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-205ENST00000469043 PMLP29590 882 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 SARSP49591 514 aaKnown RBP6.41□□□□□ -1.38
SCFD1-205ENST00000469043 SEPHS1P49903 392 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 PUM1Q14671 1186 aaKnown RBP eCLIP6.41□□□□□ -1.38
SCFD1-205ENST00000469043 CCDC144BQ3MJ40 725 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 GNPTABQ3T906 1256 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 RUFY4Q6ZNE9 571 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 ADAT2Q7Z6V5 191 aaKnown RBP6.41□□□□□ -1.38
SCFD1-205ENST00000469043 SLC43A3Q8NBI5 491 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 NETO2Q8NC67 525 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 USP33Q8TEY7 942 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 DDX1Q92499 740 aaKnown RBP6.41□□□□□ -1.38
SCFD1-205ENST00000469043 TINF2Q9BSI4 451 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 GBP3Q9H0R5 595 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 RXFP1Q9HBX9 757 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 NTMQ9P121 344 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 PPT2Q9UMR5 302 aa6.41□□□□□ -1.38
SCFD1-205ENST00000469043 NOBOXO60393 691 aa6.4□□□□□ -1.38
SCFD1-205ENST00000469043 CNR2P34972 360 aa6.4□□□□□ -1.38
SCFD1-205ENST00000469043 MAGEA10P43363 369 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-205ENST00000469043 CACNB2Q08289 660 aaPredicted RBP6.4□□□□□ -1.38
SCFD1-205ENST00000469043 HEATR6Q6AI08 1181 aaKnown RBP6.4□□□□□ -1.38
SCFD1-205ENST00000469043 SDE2Q6IQ49 451 aa6.4□□□□□ -1.38
SCFD1-205ENST00000469043 CPA5Q8WXQ8 436 aa6.4□□□□□ -1.38
SCFD1-205ENST00000469043 CAPN10Q9HC96 672 aa6.4□□□□□ -1.38
SCFD1-205ENST00000469043 RWDD3Q9Y3V2 267 aa6.4□□□□□ -1.38
SCFD1-205ENST00000469043 TRBV23OR9-2A0A075B6M9 112 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 PPM1BO75688 479 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 PAMP19021 973 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 DLX2Q07687 328 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-205ENST00000469043 COL9A2Q14055 689 aaPredicted RBP6.39□□□□□ -1.39
SCFD1-205ENST00000469043 LDLRAD1Q5T700 205 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 EGFLAMQ63HQ2 1017 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 METTL16Q86W50 562 aaKnown RBP6.39□□□□□ -1.39
SCFD1-205ENST00000469043 ADCY4Q8NFM4 1077 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 SMARCC2Q8TAQ2 1214 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 HAUS7Q99871 368 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 BCAS3Q9H6U6 928 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 CCSER2Q9H7U1 834 aa6.39□□□□□ -1.39
SCFD1-205ENST00000469043 METTL5Q9NRN9 209 aaKnown RBP6.39□□□□□ -1.39
SCFD1-205ENST00000469043 C2orf71A6NGG8 1288 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 CBFA2T2O43439 604 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 VAMP4O75379 141 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 DPY19L1Q2PZI1 675 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 ARMC5Q96C12 935 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 TGIF2Q9GZN2 237 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 PHAXQ9H814 394 aaKnown RBP6.38□□□□□ -1.39
SCFD1-205ENST00000469043 PCDH18Q9HCL0 1135 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 BACE2Q9Y5Z0 518 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 DUSP10Q9Y6W6 482 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 LTBP3Q9NS15 1303 aa6.38□□□□□ -1.39
SCFD1-205ENST00000469043 STXBP3O00186 592 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 ITGB3P05106 788 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 IGBP1P78318 339 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 AMPD2Q01433 879 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 SLC7A5Q01650 507 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 ZNF394Q53GI3 561 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 PMFBP1Q8TBY8 1022 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 UBE2Q2Q8WVN8 375 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 ZBTB8AQ96BR9 441 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 GPATCH3Q96I76 525 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 NOX5Q96PH1 765 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 MCMBPQ9BTE3 642 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 SMPD4Q9NXE4 827 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.37□□□□□ -1.39
SCFD1-205ENST00000469043 GULP1Q9UBP9 304 aa6.37□□□□□ -1.39
SCFD1-205ENST00000469043 hCG_2014768A0A024R1R8 64 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 NPHP3-ACAD11A0A0J9YXS1 232 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 NPHS1O60500 1241 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 PPP1R11O60927 126 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-205ENST00000469043 KIAA2012Q0VF49 1180 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 GNL2Q13823 731 aaKnown RBP6.36□□□□□ -1.39
SCFD1-205ENST00000469043 PTPROQ16827 1216 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 CPNE8Q86YQ8 564 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 MTA3Q9BTC8 594 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 KLHL25Q9H0H3 589 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 PIF1Q9H611 641 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 METTL14Q9HCE5 456 aaKnown RBP6.36□□□□□ -1.39
SCFD1-205ENST00000469043 SPATA6Q9NWH7 488 aaPredicted RBP6.36□□□□□ -1.39
SCFD1-205ENST00000469043 SUGT1Q9Y2Z0 365 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 TBX22Q9Y458 520 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 PCDHGB7Q9Y5F8 929 aa6.36□□□□□ -1.39
SCFD1-205ENST00000469043 PLEKHD1A6NEE1 506 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 CYP2C8P10632 490 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 EIF6P56537 245 aaKnown RBP6.35□□□□□ -1.39
SCFD1-205ENST00000469043 FANCCQ00597 558 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 GRB10Q13322 594 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 ZNF761Q86XN6 746 aaPredicted RBP6.35□□□□□ -1.39
SCFD1-205ENST00000469043 ARHGEF39Q8N4T4 335 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 OR6P1Q8NGX9 317 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 DDX11Q96FC9 970 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 RCC1LQ96I51 464 aaKnown RBP6.35□□□□□ -1.39
SCFD1-205ENST00000469043 FGD4Q96M96 766 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 ACBD3Q9H3P7 528 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 ZSWIM4Q9H7M6 989 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 RIPOR2Q9Y4F9 1068 aa6.35□□□□□ -1.39
SCFD1-205ENST00000469043 LOC102724159A0A0B4J2E5 919 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 FUCA1P04066 466 aa6.34□□□□□ -1.39
SCFD1-205ENST00000469043 EPHX1P07099 455 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms