RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 C8orf76Q96K31 380 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 TAAR1Q96RJ0 339 aa18.34■□□□□ 0.53
GPC1-207ENST00000466624 RPTORQ8N122 1335 aa18.33■□□□□ 0.53
GPC1-207ENST00000466624 SPDYE3A6NKU9 549 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 M0R2N6 131 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 MMP1P03956 469 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 EDNRBP24530 442 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 UBE2SQ16763 222 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 KRT40Q6A162 431 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 BLIDQ8IZY5 108 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 FBXO18Q8NFZ0 1043 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 TRIB2Q92519 343 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 IWS1Q96ST2 819 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 RMDN3Q96TC7 470 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 TINF2Q9BSI4 451 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 EHMT1Q9H9B1 1298 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 PXMP2Q9NR77 195 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 KCNJ14Q9UNX9 436 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 MYH7BA7E2Y1 1941 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 KIAA1217Q5T5P2 1943 aa18.33■□□□□ 0.52
GPC1-207ENST00000466624 HMGCRP04035 888 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 GRK4P32298 578 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 CCL14Q16627 93 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 ARHGEF16Q5VV41 709 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 FCHSD1Q86WN1 690 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 PURBQ96QR8 312 aaKnown RBP18.32■□□□□ 0.52
GPC1-207ENST00000466624 BRMS1Q9HCU9 246 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 GJB4Q9NTQ9 266 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 FLRT1Q9NZU1 646 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 NRBP1Q9UHY1 535 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 PCDHA6Q9UN73 950 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 PCDHA8Q9Y5H6 950 aa18.32■□□□□ 0.52
GPC1-207ENST00000466624 HSP90AA1P07900 732 aaKnown RBP18.31■□□□□ 0.52
GPC1-207ENST00000466624 PDCP20941 246 aa18.31■□□□□ 0.52
GPC1-207ENST00000466624 MFSD14CQ5VZR4 134 aa18.31■□□□□ 0.52
GPC1-207ENST00000466624 XRRA1Q6P2D8 792 aa18.31■□□□□ 0.52
GPC1-207ENST00000466624 ARMCX2Q7L311 632 aa18.31■□□□□ 0.52
GPC1-207ENST00000466624 PDCD2LQ9BRP1 358 aa18.31■□□□□ 0.52
GPC1-207ENST00000466624 ANO3Q9BYT9 981 aa18.31■□□□□ 0.52
GPC1-207ENST00000466624 BIN2Q9UBW5 565 aaPredicted RBP18.31■□□□□ 0.52
GPC1-207ENST00000466624 ELNP15502 786 aa18.3■□□□□ 0.52
GPC1-207ENST00000466624 KRT2P35908 639 aa18.3■□□□□ 0.52
GPC1-207ENST00000466624 PGM5Q15124 567 aa18.3■□□□□ 0.52
GPC1-207ENST00000466624 SAFBQ15424 915 aaKnown RBP eCLIP18.3■□□□□ 0.52
GPC1-207ENST00000466624 ADAMTS3O15072 1205 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 NR3C2P08235 984 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 PDIA4P13667 645 aaKnown RBP18.29■□□□□ 0.52
GPC1-207ENST00000466624 EIF2AK2P19525 551 aaKnown RBP18.29■□□□□ 0.52
GPC1-207ENST00000466624 SREBF1P36956 1147 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 ANP32AP39687 249 aaKnown RBP18.29■□□□□ 0.52
GPC1-207ENST00000466624 JAKMIP3Q5VZ66 844 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 PCNX4Q63HM2 1172 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 LARP1BQ659C4 914 aaKnown RBP18.29■□□□□ 0.52
GPC1-207ENST00000466624 KRT25Q7Z3Z0 450 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 DIS3L2Q8IYB7 885 aaKnown RBP18.29■□□□□ 0.52
GPC1-207ENST00000466624 ABHD16BQ9H3Z7 469 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 TMEM260Q9NX78 707 aa18.29■□□□□ 0.52
GPC1-207ENST00000466624 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.29■□□□□ 0.52
GPC1-207ENST00000466624 STAM2O75886 525 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 SNAI1O95863 264 aaPredicted RBP18.28■□□□□ 0.52
GPC1-207ENST00000466624 CCND2P30279 289 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 PDE4DQ08499 809 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 STXBP2Q15833 593 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 SLC9C1Q4G0N8 1177 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 MAP3K21Q5TCX8 1036 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 VSIG10LQ86VR7 867 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 RASGRP4Q8TDF6 673 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 CRYGNQ8WXF5 182 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 TNFRSF25Q93038 417 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 MCOLN1Q9GZU1 580 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 FOXP1Q9H334 677 aaPredicted RBP18.28■□□□□ 0.52
GPC1-207ENST00000466624 VTA1Q9NP79 307 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 TSHZ2Q9NRE2 1034 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 CNPY2Q9Y2B0 182 aa18.28■□□□□ 0.52
GPC1-207ENST00000466624 HTTP42858 3142 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 INHAP05111 366 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 CYBAP13498 195 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 CYP2C19P33261 490 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 FOSBP53539 338 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 UBXN2AP68543 259 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 GUCY1B3Q02153 619 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.52
GPC1-207ENST00000466624 OXER1Q8TDS5 423 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 ARMC5Q96C12 935 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 KATNBL1Q9H079 304 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 FOXD4L1Q9NU39 408 aa18.27■□□□□ 0.52
GPC1-207ENST00000466624 BTBD18B2RXH4 712 aa18.26■□□□□ 0.51
GPC1-207ENST00000466624 H3BQV1 296 aa18.26■□□□□ 0.51
GPC1-207ENST00000466624 EIF3JO75822 258 aaKnown RBP18.26■□□□□ 0.51
GPC1-207ENST00000466624 CYP3A4P08684 503 aa18.26■□□□□ 0.51
GPC1-207ENST00000466624 PRKAR2AP13861 404 aaKnown RBP18.26■□□□□ 0.51
GPC1-207ENST00000466624 CACNB2Q08289 660 aaPredicted RBP18.26■□□□□ 0.51
GPC1-207ENST00000466624 IFFO2Q5TF58 517 aa18.26■□□□□ 0.51
GPC1-207ENST00000466624 IL31RAQ8NI17 732 aa18.26■□□□□ 0.51
GPC1-207ENST00000466624 PGBD1Q96JS3 809 aa18.26■□□□□ 0.51
GPC1-207ENST00000466624 CCDC194A0A1B0GVG4 234 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 ZNF865P0CJ78 1059 aaPredicted RBP18.25■□□□□ 0.51
GPC1-207ENST00000466624 MYCLP12524 364 aaPredicted RBP18.25■□□□□ 0.51
GPC1-207ENST00000466624 SYT1P21579 422 aa18.25■□□□□ 0.51
GPC1-207ENST00000466624 U2AF2P26368 475 aaKnown RBP eCLIP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms