RNA–Protein interactions for RNA: ENST00000440731.4

PGBD4P3-201, Transcript of piggyBac transposable element derived 4 pseudogene 3, humanhuman

BASIC

Gene PGBD4P3, Length 581 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4P3-201ENST00000440731 IFRD2Q12894 506 aaPredicted RBP5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 NR1I3Q14994 352 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 FBLN7Q53RD9 439 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 NBPF6Q5VWK0 638 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 DENND5AQ6IQ26 1287 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 NSMFQ6X4W1 530 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 CEP68Q76N32 757 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 LRRC47Q8N1G4 583 aaKnown RBP5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 KREMEN2Q8NCW0 462 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 DPF3Q92784 378 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 TRMT2BQ96GJ1 504 aaKnown RBP5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 NBPF4Q96M43 638 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 CDC6Q99741 560 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 SPATA9Q9BWV2 254 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 CCDC113Q9H0I3 377 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 BCAS3Q9H6U6 928 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 ARHGEF4Q9NR80 690 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 MBD1Q9UIS9 605 aaPredicted RBP5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 SIT1Q9Y3P8 196 aa5.52□□□□□ -1.53
PGBD4P3-201ENST00000440731 KDM2BQ8NHM5 1336 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 TRAV20A0A0B4J274 112 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 MYO1BO43795 1136 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 DLX3O60479 287 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 DIAPH1O60610 1272 aaKnown RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 SCG5P05408 212 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 PABPC1P11940 636 aaKnown RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 FPR2P25090 351 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 EPHB3P54753 998 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 YBX1P67809 324 aaKnown RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 PLEKHN1Q494U1 663 aaPredicted RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 SOGA3Q5TF21 947 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 E4F1Q66K89 784 aaPredicted RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 RCBTB1Q8NDN9 531 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 ARMC5Q96C12 935 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 SGSM3Q96HU1 749 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 IPO9Q96P70 1041 aaKnown RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 DEPDC7Q96QD5 511 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 CNTD2Q9H8S5 307 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 SMG5Q9UPR3 1016 aaKnown RBP5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 MSRB2Q9Y3D2 182 aa5.51□□□□□ -1.53
PGBD4P3-201ENST00000440731 SEMA7AO75326 666 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 TSPAN15O95858 294 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 KRT1P04264 644 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 GLI4P10075 376 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 LTBRP36941 435 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 RASGRF1Q13972 1273 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 PLEKHO2Q8TD55 490 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 TMEM169Q96HH4 297 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 DRC1Q96MC2 740 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 DNAJC7Q99615 494 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 MTA3Q9BTC8 594 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 SNTG2Q9NY99 539 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 FBXL7Q9UJT9 491 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 CNOT6Q9ULM6 557 aaKnown RBP5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 PLA2G2DQ9UNK4 145 aa5.5□□□□□ -1.53
PGBD4P3-201ENST00000440731 GLDCP23378 1020 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 MAPKAPK2P49137 400 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 KCNAB2Q13303 367 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 BMS1Q14692 1282 aaKnown RBP5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 CBX2Q14781 532 aaPredicted RBP5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 KCNA10Q16322 511 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 SLC35F1Q5T1Q4 408 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 LCE5AQ5TCM9 118 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 WWC2Q6AWC2 1192 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 KCNT2Q6UVM3 1135 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 LDHDQ86WU2 507 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 ALG3Q92685 438 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 IRF2BPLQ9H1B7 796 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 GCM1Q9NP62 436 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 CLDND1Q9NY35 253 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 NUDT5Q9UKK9 219 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 IRAK3Q9Y616 596 aa5.49□□□□□ -1.53
PGBD4P3-201ENST00000440731 DBX1A6NMT0 343 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 N4BP3O15049 544 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 SRGAP3O43295 1099 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 NUAK1O60285 661 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 BUB1BO60566 1050 aaPredicted RBP5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 FAM153BP0C7A2 387 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 FGFR1P11362 822 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 CDR1P51861 262 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 LINC00310P59036 64 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 MAP4K2Q12851 820 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 LSAMPQ13449 338 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 SERINC3Q13530 473 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 RASA3Q14644 834 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 FAM209AQ5JX71 171 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 SPOCD1Q6ZMY3 1216 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 BHLHE22Q8NFJ8 381 aaPredicted RBP5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 MZB1Q8WU39 189 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 OSBP2Q969R2 916 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 C1orf159Q96HA4 380 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 PEX11GQ96HA9 241 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 PHF20Q9BVI0 1012 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 ZSWIM4Q9H7M6 989 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 FAN1Q9Y2M0 1017 aa5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 COA3Q9Y2R0 106 aaPredicted RBP5.48□□□□□ -1.53
PGBD4P3-201ENST00000440731 TRBV23-1A0A0A0MS06 115 aa5.47□□□□□ -1.53
PGBD4P3-201ENST00000440731 HRKO00198 91 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms