RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 NAPBQ9H115 298 aa19.74■□□□□ 0.75
CHMP3-203ENST00000409225 RANBP17Q9H2T7 1088 aaKnown RBP19.74■□□□□ 0.75
CHMP3-203ENST00000409225 LMCD1Q9NZU5 365 aa19.74■□□□□ 0.75
CHMP3-203ENST00000409225 PIEZO1Q92508 2521 aa19.74■□□□□ 0.75
CHMP3-203ENST00000409225 TSPY2A6NKD2 308 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 NKRFO15226 690 aaKnown RBP eCLIP19.73■□□□□ 0.75
CHMP3-203ENST00000409225 KPNA6O60684 536 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 SLC16A2P36021 539 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 PDE4DQ08499 809 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 PTGISQ16647 500 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 TTBK2Q6IQ55 1244 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 GJD3Q8N144 294 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 CCDC155Q8N6L0 562 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 SEC62Q99442 399 aaKnown RBP19.73■□□□□ 0.75
CHMP3-203ENST00000409225 IL17RBQ9NRM6 502 aa19.73■□□□□ 0.75
CHMP3-203ENST00000409225 LOC102724159A0A0B4J2E5 919 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 A6NJR5 290 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 PRR33A8MZF0 331 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 SSTR3P32745 418 aaPredicted RBP19.72■□□□□ 0.75
CHMP3-203ENST00000409225 PWP2Q15269 919 aaKnown RBP19.72■□□□□ 0.75
CHMP3-203ENST00000409225 LRRFIP1Q32MZ4 808 aaKnown RBP19.72■□□□□ 0.75
CHMP3-203ENST00000409225 FAM178BQ8IXR5 827 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 GPATCH3Q96I76 525 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 UIMC1Q96RL1 719 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 SUGCTQ9HAC7 445 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 INCENPQ9NQS7 918 aa19.72■□□□□ 0.75
CHMP3-203ENST00000409225 KCNA5P22460 613 aa19.71■□□□□ 0.75
CHMP3-203ENST00000409225 CTDSPL2Q05D32 466 aa19.71■□□□□ 0.75
CHMP3-203ENST00000409225 CAGE1Q8TC20 777 aa19.71■□□□□ 0.75
CHMP3-203ENST00000409225 AFAP1L1Q8TED9 768 aa19.71■□□□□ 0.75
CHMP3-203ENST00000409225 SCFD2Q8WU76 684 aa19.71■□□□□ 0.75
CHMP3-203ENST00000409225 DCAF4Q8WV16 495 aa19.71■□□□□ 0.75
CHMP3-203ENST00000409225 TGS1Q96RS0 853 aaKnown RBP19.71■□□□□ 0.75
CHMP3-203ENST00000409225 TRIP12Q14669 1992 aaPredicted RBP19.71■□□□□ 0.75
CHMP3-203ENST00000409225 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.7■□□□□ 0.74
CHMP3-203ENST00000409225 TXNP10599 105 aaKnown RBP19.7■□□□□ 0.74
CHMP3-203ENST00000409225 SELPP16109 830 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 GPNMBQ14956 572 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 LEXMQ3ZCV2 418 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 SYDE2Q5VT97 1194 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 FAM117BQ6P1L5 589 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 CNKSR3Q6P9H4 555 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 RNF207Q6ZRF8 634 aa19.7■□□□□ 0.74
CHMP3-203ENST00000409225 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.7■□□□□ 0.74
CHMP3-203ENST00000409225 MPHOSPH6Q99547 160 aaKnown RBP19.7■□□□□ 0.74
CHMP3-203ENST00000409225 DDX52Q9Y2R4 599 aaKnown RBP eCLIP19.7■□□□□ 0.74
CHMP3-203ENST00000409225 LINC01553A4QN01 128 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 RBAK-RBAKDNI3L0D1 243 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 IL9P15248 144 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 ERVK-21P61565 698 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 TCTN1Q2MV58 587 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 GDF6Q6KF10 455 aaPredicted RBP19.69■□□□□ 0.74
CHMP3-203ENST00000409225 LRRC8DQ7L1W4 858 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 CLEC4DQ8WXI8 215 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 CTAGE1Q96RT6 745 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 CRBNQ96SW2 442 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 RAD9AQ99638 391 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 GPCPD1Q9NPB8 672 aa19.69■□□□□ 0.74
CHMP3-203ENST00000409225 FRMPD2Q68DX3 1309 aaPredicted RBP19.69■□□□□ 0.74
CHMP3-203ENST00000409225 RANBP6O60518 1105 aaKnown RBP19.68■□□□□ 0.74
CHMP3-203ENST00000409225 ARIH2O95376 493 aa19.68■□□□□ 0.74
CHMP3-203ENST00000409225 GJB5O95377 273 aa19.68■□□□□ 0.74
CHMP3-203ENST00000409225 EDNRBP24530 442 aa19.68■□□□□ 0.74
CHMP3-203ENST00000409225 MRE11P49959 708 aa19.68■□□□□ 0.74
CHMP3-203ENST00000409225 PTCRAQ6ISU1 281 aaPredicted RBP19.68■□□□□ 0.74
CHMP3-203ENST00000409225 BTNL9Q6UXG8 535 aa19.68■□□□□ 0.74
CHMP3-203ENST00000409225 DHX38Q92620 1227 aaKnown RBP19.68■□□□□ 0.74
CHMP3-203ENST00000409225 CHMP4BQ9H444 224 aaKnown RBP19.68■□□□□ 0.74
CHMP3-203ENST00000409225 NBNO60934 754 aa19.67■□□□□ 0.74
CHMP3-203ENST00000409225 RPS6P62753 249 aaKnown RBP19.67■□□□□ 0.74
CHMP3-203ENST00000409225 CSPP1Q1MSJ5 1256 aa19.67■□□□□ 0.74
CHMP3-203ENST00000409225 AFG1LQ8WV93 481 aa19.67■□□□□ 0.74
CHMP3-203ENST00000409225 CXCL10P02778 98 aa19.66■□□□□ 0.74
CHMP3-203ENST00000409225 ALADP13716 330 aa19.66■□□□□ 0.74
CHMP3-203ENST00000409225 DNERQ8NFT8 737 aa19.66■□□□□ 0.74
CHMP3-203ENST00000409225 SIP14410 1827 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 ABHD14A-ACY1A0A1B0GW23 586 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 PARNO95453 639 aaKnown RBP19.65■□□□□ 0.74
CHMP3-203ENST00000409225 MMP3P08254 477 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 CKBP12277 381 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 ZMYM1Q5SVZ6 1142 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 CHST3Q7LGC8 479 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 SESTD1Q86VW0 696 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 FBXO22Q8NEZ5 403 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 KAT2BQ92831 832 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 C17orf80Q9BSJ5 609 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 FSD1Q9BTV5 496 aa19.65■□□□□ 0.74
CHMP3-203ENST00000409225 GRXCR2A6NFK2 248 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 B4DLN1 442 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 NOVP48745 357 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 MRPL12P52815 198 aaKnown RBP19.64■□□□□ 0.73
CHMP3-203ENST00000409225 RBL2Q08999 1139 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 IKBKEQ14164 716 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 LY6KQ17RY6 165 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 TMEM47Q9BQJ4 181 aa19.64■□□□□ 0.73
CHMP3-203ENST00000409225 H3BQ06 376 aaPredicted RBP19.63■□□□□ 0.73
CHMP3-203ENST00000409225 FOXP2O15409 715 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 EFCAB14O75071 495 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 GH1P01241 217 aa19.63■□□□□ 0.73
CHMP3-203ENST00000409225 TOP1P11387 765 aaKnown RBP19.63■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms