RNA–Protein interactions for RNA: ENST00000399892.6

SEH1L-202, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best) BASIC

Gene SEH1L, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-202ENST00000399892 SMC3Q9UQE7 1217 aa20.32■□□□□ 0.84
SEH1L-202ENST00000399892 HSP90AA1P07900 732 aaKnown RBP20.31■□□□□ 0.84
SEH1L-202ENST00000399892 EIF2AK2P19525 551 aaKnown RBP20.31■□□□□ 0.84
SEH1L-202ENST00000399892 FOSBP53539 338 aa20.31■□□□□ 0.84
SEH1L-202ENST00000399892 PDE4DQ08499 809 aa20.31■□□□□ 0.84
SEH1L-202ENST00000399892 ARMCX2Q7L311 632 aa20.31■□□□□ 0.84
SEH1L-202ENST00000399892 FGD4Q96M96 766 aa20.31■□□□□ 0.84
SEH1L-202ENST00000399892 SYNGAP1Q96PV0 1343 aa20.31■□□□□ 0.84
SEH1L-202ENST00000399892 EHMT1Q9H9B1 1298 aa20.31■□□□□ 0.84
SEH1L-202ENST00000399892 LOC102724159A0A0B4J2E5 919 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 MYCP01106 439 aaPredicted RBP20.3■□□□□ 0.84
SEH1L-202ENST00000399892 PRKAR2AP13861 404 aaKnown RBP20.3■□□□□ 0.84
SEH1L-202ENST00000399892 PWP2Q15269 919 aaKnown RBP20.3■□□□□ 0.84
SEH1L-202ENST00000399892 MAMDC4Q6UXC1 1216 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 REXO1Q8N1G1 1221 aaKnown RBP20.3■□□□□ 0.84
SEH1L-202ENST00000399892 PXMP2Q9NR77 195 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 TRIM32Q13049 653 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 GALNT17Q6IS24 598 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 IWS1Q96ST2 819 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.3■□□□□ 0.84
SEH1L-202ENST00000399892 KCNJ14Q9UNX9 436 aa20.3■□□□□ 0.84
SEH1L-202ENST00000399892 ASTN1O14525 1302 aa20.29■□□□□ 0.84
SEH1L-202ENST00000399892 FOSP01100 380 aaPredicted RBP20.29■□□□□ 0.84
SEH1L-202ENST00000399892 CNGA1P29973 690 aa20.29■□□□□ 0.84
SEH1L-202ENST00000399892 CACNB2Q08289 660 aaPredicted RBP20.29■□□□□ 0.84
SEH1L-202ENST00000399892 MCTP2Q6DN12 878 aa20.29■□□□□ 0.84
SEH1L-202ENST00000399892 C8orf76Q96K31 380 aa20.29■□□□□ 0.84
SEH1L-202ENST00000399892 BRMS1Q9HCU9 246 aa20.29■□□□□ 0.84
SEH1L-202ENST00000399892 PCDHA4Q9UN74 947 aa20.29■□□□□ 0.84
SEH1L-202ENST00000399892 AP3B2Q13367 1082 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 CUL4AQ13619 759 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 JAKMIP3Q5VZ66 844 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 EEPD1Q7L9B9 569 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 TNS4Q8IZW8 715 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 ABHD16BQ9H3Z7 469 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 HMX1Q9NP08 348 aaPredicted RBP20.28■□□□□ 0.84
SEH1L-202ENST00000399892 GJB4Q9NTQ9 266 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 ZHX1Q9UKY1 873 aaPredicted RBP20.28■□□□□ 0.84
SEH1L-202ENST00000399892 PCDHA6Q9UN73 950 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 PCDHA8Q9Y5H6 950 aa20.28■□□□□ 0.84
SEH1L-202ENST00000399892 MYCLP12524 364 aaPredicted RBP20.27■□□□□ 0.84
SEH1L-202ENST00000399892 GJB2P29033 226 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 BLIDQ8IZY5 108 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 ARMC5Q96C12 935 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 PDCD2LQ9BRP1 358 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 PHF20Q9BVI0 1012 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 DDX49Q9Y6V7 483 aaKnown RBP20.27■□□□□ 0.84
SEH1L-202ENST00000399892 NR3C2P08235 984 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 PGM5Q15124 567 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 STXBP2Q15833 593 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 PRAMEF19Q5SWL8 479 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 SHISA4Q96DD7 197 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 ZNF333Q96JL9 665 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 TMEM260Q9NX78 707 aa20.27■□□□□ 0.84
SEH1L-202ENST00000399892 RPTORQ8N122 1335 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 SNAI1O95863 264 aaPredicted RBP20.26■□□□□ 0.83
SEH1L-202ENST00000399892 CCND2P30279 289 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 SAFBQ15424 915 aaKnown RBP eCLIP20.26■□□□□ 0.83
SEH1L-202ENST00000399892 PGBD1Q96JS3 809 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 ANO3Q9BYT9 981 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 RNF208Q9H0X6 261 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 FOXD4L1Q9NU39 408 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 NRBP1Q9UHY1 535 aa20.26■□□□□ 0.83
SEH1L-202ENST00000399892 CLK2P49760 499 aaKnown RBP20.25■□□□□ 0.83
SEH1L-202ENST00000399892 GUCY1B3Q02153 619 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 ACVR2BQ13705 512 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 BECN1Q14457 450 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 KRT40Q6A162 431 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 FBXO16Q8IX29 292 aaPredicted RBP20.25■□□□□ 0.83
SEH1L-202ENST00000399892 RASGRP4Q8TDF6 673 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 INTS4Q96HW7 963 aaKnown RBP20.25■□□□□ 0.83
SEH1L-202ENST00000399892 CYBAP13498 195 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 EDNRBP24530 442 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 KRT2P35908 639 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 MTFR1Q15390 333 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 MAP3K21Q5TCX8 1036 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 DAGLBQ8NCG7 672 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 MORC4Q8TE76 937 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 VTA1Q9NP79 307 aa20.25■□□□□ 0.83
SEH1L-202ENST00000399892 KIAA1217Q5T5P2 1943 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 IGHA2P01877 340 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 MMP1P03956 469 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 CCL5P13501 91 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 CCND3P30281 292 aaPredicted RBP20.24■□□□□ 0.83
SEH1L-202ENST00000399892 GNL2Q13823 731 aaKnown RBP20.24■□□□□ 0.83
SEH1L-202ENST00000399892 TMEM106CQ9BVX2 250 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 UNC93B1Q9H1C4 597 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 FRMPD4Q14CM0 1322 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 MYH7BA7E2Y1 1941 aa20.24■□□□□ 0.83
SEH1L-202ENST00000399892 H3BQV1 296 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 EIF3JO75822 258 aaKnown RBP20.23■□□□□ 0.83
SEH1L-202ENST00000399892 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 VSIG10LQ86VR7 867 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 IL31RAQ8NI17 732 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.23■□□□□ 0.833e-6■■□□□ 14.4
SEH1L-202ENST00000399892 LRRC37A2A6NM11 1700 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 CCDC194A0A1B0GVG4 234 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 PCNX4Q63HM2 1172 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 XRRA1Q6P2D8 792 aa20.23■□□□□ 0.83
SEH1L-202ENST00000399892 FBXO18Q8NFZ0 1043 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms