RNA–Protein interactions for RNA: ENST00000399352.5

ITSN1-209, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-209ENST00000399352 TMTC4Q5T4D3 741 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 PNMA1Q8ND90 353 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 RBM17Q96I25 401 aaKnown RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 MMS19Q96T76 1030 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 DDX25Q9UHL0 483 aaKnown RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 COL4A3BPQ9Y5P4 624 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 SYNJ2BP-COX16A0A087WUM0 186 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 RFX6Q8HWS3 928 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 UNC5CLQ8IV45 518 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ST13P4Q8IZP2 240 aaPredicted RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 CCDC24Q8N4L8 307 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 FAM133AQ8N9E0 248 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 SMCR8Q8TEV9 937 aaPredicted RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 NHEJ1Q9H9Q4 299 aaPredicted RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 COX16Q9P0S2 106 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ZBTB12Q9Y330 459 aaPredicted RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 TOM1L1O75674 476 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 EIF4A3P38919 411 aaKnown RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 STX1BP61266 288 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ZNF653Q96CK0 615 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ZMAT2Q96NC0 199 aaKnown RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ANO3Q9BYT9 981 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 DNAJC17Q9NVM6 304 aaKnown RBP17.51■□□□□ 0.39
ITSN1-209ENST00000399352 GNPATO15228 680 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 PPP6R2O75170 966 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 NDUFA10O95299 355 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 MT-ND3P03897 115 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 MYL7Q01449 175 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 LMNB2Q03252 620 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 TRIML2Q8N7C3 387 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 DYDC2Q96IM9 177 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 CENPKQ9BS16 269 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 C19orf44Q9H6X5 657 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 KRT82Q9NSB4 513 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 GGA1Q9UJY5 639 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 PCDH11XQ9BZA7 1347 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 PCDH11YQ9BZA8 1340 aa17.51■□□□□ 0.39
ITSN1-209ENST00000399352 ATP1A3P13637 1013 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 NR2F2P24468 414 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 NLRX1Q86UT6 975 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 TRIM42Q8IWZ5 723 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 CNBD1Q8NA66 436 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 P2RX5Q93086 422 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 CCDC68Q9H2F9 335 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 NOD1Q9Y239 953 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 SORBS3O60504 671 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 LRRN2O75325 713 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 NCAPGQ9BPX3 1015 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 PICK1Q9NRD5 415 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 ARPP21Q9UBL0 812 aaPredicted RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 KLRF2D3W0D1 207 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 HDLBPQ00341 1268 aaKnown RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 ERBB4Q15303 1308 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 XKR9Q5GH70 373 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 TRMT10CQ7L0Y3 403 aaKnown RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 CARMIL3Q8ND23 1372 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 FMO2Q99518 471 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 TRIM56Q9BRZ2 755 aaKnown RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 POLR3EQ9NVU0 708 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 WDR7Q9Y4E6 1490 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 HMGB1P1B2RPK0 211 aaPredicted RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 PDHA1P08559 390 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 MAML1Q92585 1016 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 EFHD1Q9BUP0 239 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 TMOD4Q9NZQ9 345 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 NCF2P19878 526 aaPredicted RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 MAPK4P31152 587 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 RINT1Q6NUQ1 792 aa17.5■□□□□ 0.39
ITSN1-209ENST00000399352 NSUN7Q8NE18 718 aaKnown RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 THRAP3Q9Y2W1 955 aaKnown RBP17.5■□□□□ 0.39
ITSN1-209ENST00000399352 MROH5Q6ZUA9 1318 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 EXOC1LA0A1B0GW35 172 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 NEURL1BA8MQ27 555 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 HP1BP3Q5SSJ5 553 aaPredicted RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 KIAA1024Q9UPX6 916 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 PDE6AP16499 860 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 POLR2BP30876 1174 aaKnown RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 NAA30Q147X3 362 aaPredicted RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 TMEM259Q4ZIN3 620 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 RETREG2Q8NC44 543 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 KCNV2Q8TDN2 545 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 FAM167BQ9BTA0 163 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 ZMYND12Q9H0C1 365 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 ZCCHC17Q9NP64 241 aaKnown RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 PLAAQ9Y263 795 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 CA4P22748 312 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 MAP4K1Q92918 833 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 MED10Q9BTT4 135 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 HAUS2Q9NVX0 235 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 TESPA1A2RU30 521 aaPredicted RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 PTK2Q05397 1052 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 GLG1Q92896 1179 aa17.49■□□□□ 0.39
ITSN1-209ENST00000399352 PACSIN2Q9UNF0 486 aaPredicted RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 MAGED2Q9UNF1 606 aaPredicted RBP17.49■□□□□ 0.39
ITSN1-209ENST00000399352 KIF24Q5T7B8 1368 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 COL17A1Q9UMD9 1497 aaPredicted RBP17.48■□□□□ 0.39
ITSN1-209ENST00000399352 ZBED4O75132 1171 aa17.48■□□□□ 0.39
ITSN1-209ENST00000399352 DYNLT1P63172 113 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms