RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 OPA1O60313 960 aa10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 ATP6V1AP38606 617 aa10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 CARSP49589 748 aaKnown RBP10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 GUCY2DQ02846 1103 aa10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 PKN1Q16512 942 aa10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 CFAP58Q5T655 872 aa10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 SUGP1Q8IWZ8 645 aaKnown RBP10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 NOC3LQ8WTT2 800 aaKnown RBP10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 NOC4LQ9BVI4 516 aaKnown RBP10.98□□□□□ -0.65
PTCHD4-202ENST00000398738 LGALS16A8MUM7 142 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 E7EVH7 732 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 TACC1O75410 805 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 PDE8BO95263 885 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 CYP7A1P22680 504 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 USP8P40818 1118 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 PAFAH1B1P43034 410 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 FAM47AQ5JRC9 791 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 IQCEQ6IPM2 695 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 KIF6Q6ZMV9 814 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 CATIPQ7Z7H3 387 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 GIMAP7Q8NHV1 300 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 GPKOWQ92917 476 aaPredicted RBP eCLIP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 EPB41L5Q9HCM4 733 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 RBM12Q9NTZ6 932 aaKnown RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 PACSIN2Q9UNF0 486 aaPredicted RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 LRRC10BA6NIK2 292 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 H7C1D1 291 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 IRS4O14654 1257 aaPredicted RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 ZNF263O14978 683 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 CFHP08603 1231 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 HLTFQ14527 1009 aaKnown RBP eCLIP10.97□□□□□ -0.659e-7■■□□□ 13.9
PTCHD4-202ENST00000398738 CREG2Q8IUH2 290 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 EHBP1Q8NDI1 1231 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 AENQ8WTP8 325 aaKnown RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 SCLT1Q96NL6 688 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 MYH8P13535 1937 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 TCRBV5S4A2TA0A5A2 114 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 TARSL2A2RTX5 802 aaKnown RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 PSMA7O14818 248 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 USO1O60763 962 aaKnown RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 HOXB1P14653 301 aaPredicted RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 UBA7P41226 1012 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 RASSF7Q02833 373 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 E2F5Q15329 346 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 TDRD12Q587J7 1177 aaKnown RBP10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 DNAJC10Q8IXB1 793 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 CAPN11Q9UMQ6 739 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 SNX12Q9UMY4 172 aa10.97□□□□□ -0.65
PTCHD4-202ENST00000398738 GOLGA8KD6RF30 607 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 SHOX2O60902 331 aaPredicted RBP10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 CPP00450 1065 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 ODF2Q5BJF6 829 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 PDXDC2PQ6P474 469 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 KLHL7Q8IXQ5 586 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 ENAHQ8N8S7 591 aaPredicted RBP10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 OR2W6PQ8NHA6 318 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 CABS1Q96KC9 395 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 CEP89Q96ST8 783 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 TANGO6Q9C0B7 1094 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 EXOC1Q9NV70 894 aa10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.96□□□□□ -0.65
PTCHD4-202ENST00000398738 PIK3CDO00329 1044 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 FTCDO95954 541 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 EIF4A3P38919 411 aaKnown RBP10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 VAV2P52735 878 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 HDLBPQ00341 1268 aaKnown RBP10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 SF3B2Q13435 895 aaKnown RBP10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 RRAGAQ7L523 313 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 AMOTL1Q8IY63 956 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 BANK1Q8NDB2 785 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 ESR2Q92731 530 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 OSBPL9Q96SU4 736 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 PHF20Q9BVI0 1012 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 NLRC4Q9NPP4 1024 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 DCCP43146 1447 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 PCCAP05165 728 aaPredicted RBP10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 GLI1P08151 1106 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 FCER1AP12319 257 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 BLOC1S3Q6QNY0 202 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 PRR7Q8TB68 274 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 RPGRIP1Q96KN7 1286 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 CNOT6LQ96LI5 555 aaKnown RBP10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 DNAJC7Q99615 494 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 RMND1Q9NWS8 449 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 STIM2Q9P246 746 aa10.96□□□□□ -0.66
PTCHD4-202ENST00000398738 LTN1O94822 1766 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 EPHB6O15197 1021 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 HEXIM1O94992 359 aaKnown RBP10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 LSP1P33241 339 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 MAGEA1P43355 309 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 DNM2P50570 870 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 CEP85LQ5SZL2 805 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 B4GALNT4Q76KP1 1039 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 TMTC2Q8N394 836 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC155Q8N6L0 562 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 CCDC114Q96M63 670 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 KRT12Q99456 494 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 RNF26Q9BY78 433 aaPredicted RBP10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 SUFUQ9UMX1 484 aa10.95□□□□□ -0.66
PTCHD4-202ENST00000398738 PCDHA13Q9Y5I0 950 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms