RNA–Protein interactions for RNA: ENST00000391814.5

SHANK1-204, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHANK1, Length 6,622 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-204ENST00000391814 CNPY4Q8N129 248 aa17.55■□□□□ 0.4
SHANK1-204ENST00000391814 SPATA5Q8NB90 893 aa17.55■□□□□ 0.4
SHANK1-204ENST00000391814 FAM89AQ96GI7 184 aa17.55■□□□□ 0.4
SHANK1-204ENST00000391814 FLT4P35916 1363 aa17.55■□□□□ 0.4
SHANK1-204ENST00000391814 ENO4A6NNW6 628 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 ART3Q13508 389 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 LLGL1Q15334 1064 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 CCDC125Q86Z20 511 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 PTGDRQ13258 359 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 PPP2R5BQ15173 497 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 SMYD3Q9H7B4 428 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 ZFP69BQ9UJL9 534 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 CAPN11Q9UMQ6 739 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 GYG2O15488 501 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 ADCY2Q08462 1091 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 SLMAPQ14BN4 828 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 EP400NLQ6ZTU2 488 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 KRT82Q9NSB4 513 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 BAG5Q9UL15 447 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 GMNCA6NCL1 334 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 TAF5LO75529 589 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 EIF3BP55884 814 aaKnown RBP17.54■□□□□ 0.4
SHANK1-204ENST00000391814 FAM102BQ5T8I3 360 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 ZNF658Q5TYW1 1059 aaPredicted RBP17.54■□□□□ 0.4
SHANK1-204ENST00000391814 POMGNT1Q8WZA1 660 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 PITPNM3Q9BZ71 974 aa17.54■□□□□ 0.4
SHANK1-204ENST00000391814 A0A0G2JND7 137 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 TMEM232C9JQI7 657 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 DKC1O60832 514 aaKnown RBP eCLIP17.53■□□□□ 0.4
SHANK1-204ENST00000391814 ATP1A3P13637 1013 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 MAP7D3Q8IWC1 876 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 ZSCAN10Q96SZ4 725 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-204ENST00000391814 ATP5JP18859 108 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 CYP2C19P33261 490 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 NRBF2Q96F24 287 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 H7C0C1 242 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 ACSL3O95573 720 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 ATP5OP48047 213 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 PSMC1P62191 440 aaKnown RBP17.53■□□□□ 0.4
SHANK1-204ENST00000391814 GINS2Q9Y248 185 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 CFAP43Q8NDM7 1665 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 LARGE1O95461 756 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 PSMD2Q13200 908 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 CUL1Q13616 776 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 TMEM259Q4ZIN3 620 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 SYT2Q8N9I0 419 aaPredicted RBP17.53■□□□□ 0.4
SHANK1-204ENST00000391814 TMEM60Q9H2L4 133 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 GSTA4O15217 222 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 MT-ND3P03897 115 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 LMNB2Q03252 620 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 TRIM50Q86XT4 487 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 SPC25Q9HBM1 224 aa17.53■□□□□ 0.4
SHANK1-204ENST00000391814 KDM5AP29375 1690 aaKnown RBP17.53■□□□□ 0.4
SHANK1-204ENST00000391814 OR52Z1P0C646 297 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 SLC39A14Q15043 492 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 EMBQ6PCB8 327 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 REXO1Q8N1G1 1221 aaKnown RBP17.52■□□□□ 0.4
SHANK1-204ENST00000391814 EXOC1LA0A1B0GW35 172 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 K7ENM7 598 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 MAGOHP61326 146 aaKnown RBP17.52■□□□□ 0.4
SHANK1-204ENST00000391814 CCDC144BQ3MJ40 725 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 RWDD2AQ9UIY3 292 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 GOLGA8QA0A0J9YX86 632 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 GOLGA8OA6NCC3 632 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 GOLGA8NF8WBI6 632 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 PLBD2Q8NHP8 589 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 LZTS2Q9BRK4 669 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
SHANK1-204ENST00000391814 PLCH2O75038 1416 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 NPATQ14207 1427 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 MED23Q9ULK4 1368 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 FRMPD2Q68DX3 1309 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-204ENST00000391814 MAN1A2O60476 641 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 GPC4O75487 556 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 ZFXP17010 805 aaPredicted RBP17.52■□□□□ 0.4
SHANK1-204ENST00000391814 CNGA1P29973 690 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 PDE1BQ01064 536 aa17.52■□□□□ 0.4
SHANK1-204ENST00000391814 HSPD1P10809 573 aaKnown RBP17.52■□□□□ 0.39
SHANK1-204ENST00000391814 IL13P35225 146 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 LONP1P36776 959 aaKnown RBP17.52■□□□□ 0.39
SHANK1-204ENST00000391814 RFX8Q6ZV50 586 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 CDKL2Q92772 493 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 EFHD1Q9BUP0 239 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 RINT1Q6NUQ1 792 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 PPM1KQ8N3J5 372 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 ANKRD2Q9GZV1 360 aa17.52■□□□□ 0.39
SHANK1-204ENST00000391814 USP6NLQ92738 828 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 POLR3EQ9NVU0 708 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 MFAP3LO75121 409 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 NBPF10Q6P3W6 841 aaKnown RBP17.51■□□□□ 0.39
SHANK1-204ENST00000391814 NSMCE1Q8WV22 266 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 P2RX5Q93086 422 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 NCAPGQ9BPX3 1015 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 TRPM2O94759 1503 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 STX1BP61266 288 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 CYP27A1Q02318 531 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 CDAN1Q8IWY9 1227 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 SERPINI1Q99574 410 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 POLD1P28340 1107 aa17.51■□□□□ 0.39
SHANK1-204ENST00000391814 KIF11P52732 1056 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms