RNA–Protein interactions for RNA: ENST00000369550.9

DKC1-201, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DKC1, Length 2,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-201ENST00000369550 MIIPQ5JXC2 388 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 DTHD1Q6ZMT9 781 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 PIK3R5Q8WYR1 880 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 ERGIC2Q96RQ1 377 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 PNPLA7Q6ZV29 1317 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 TIAM2Q8IVF5 1701 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 EMC10Q5UCC4 262 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 TMTC3Q6ZXV5 915 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 CD302Q8IX05 232 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 PARP9Q8IXQ6 854 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 ARFGAP2Q8N6H7 521 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 KRT12Q99456 494 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 MMRN2Q9H8L6 949 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 LRP2BPQ9P2M1 347 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 SALL4Q9UJQ4 1053 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 GGA2Q9UJY4 613 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 PLAAQ9Y263 795 aa18.7■□□□□ 0.58
DKC1-201ENST00000369550 SMIM22K7EJ46 135 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CALM1P0DP23 149 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CALM2P0DP24 149 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CALM3P0DP25 149 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CCNE1P24864 410 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 RRAGAQ7L523 313 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CCDC155Q8N6L0 562 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CCDC47Q96A33 483 aaKnown RBP18.69■□□□□ 0.58
DKC1-201ENST00000369550 ACTR5Q9H9F9 607 aaPredicted RBP18.69■□□□□ 0.58
DKC1-201ENST00000369550 SNAP23O00161 211 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 SLC5A1P13866 664 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 PDE4DQ08499 809 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 TROAPQ12815 778 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 CYB5D1Q6P9G0 228 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 MREGQ8N565 214 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 WHAMMQ8TF30 809 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 MTMR8Q96EF0 704 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 TSKSQ9UJT2 592 aa18.69■□□□□ 0.58
DKC1-201ENST00000369550 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.69■□□□□ 0.58
DKC1-201ENST00000369550 MYL1P05976 194 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 PDHBP11177 359 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 SCG2P13521 617 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 RNASE9P60153 205 aaKnown RBP18.68■□□□□ 0.58
DKC1-201ENST00000369550 GFPT1Q06210 699 aaPredicted RBP18.68■□□□□ 0.58
DKC1-201ENST00000369550 KLHDC7AQ5VTJ3 777 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 MIEF2Q96C03 454 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 IQCDQ96DY2 449 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 MYH10P35580 1976 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 GCOM1H8Y6P7 765 aaPredicted RBP18.68■□□□□ 0.58
DKC1-201ENST00000369550 EPHB6O15197 1021 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 MYZAPP0CAP1 466 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 EZRP15311 586 aaKnown RBP18.68■□□□□ 0.58
DKC1-201ENST00000369550 HNRNPH3P31942 346 aaKnown RBP18.68■□□□□ 0.58
DKC1-201ENST00000369550 HLTFQ14527 1009 aaKnown RBP eCLIP18.68■□□□□ 0.58
DKC1-201ENST00000369550 WLSQ5T9L3 541 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 PPP4R3AQ6IN85 833 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 C6orf89Q6UWU4 347 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 ZSCAN29Q8IWY8 852 aaPredicted RBP18.68■□□□□ 0.58
DKC1-201ENST00000369550 CASKIN2Q8WXE0 1202 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 ZNF622Q969S3 477 aaKnown RBP eCLIP18.68■□□□□ 0.581e-9■□□□□ 10.9
DKC1-201ENST00000369550 RNF14Q9UBS8 474 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 TOGARAM1Q9Y4F4 1720 aa18.68■□□□□ 0.58
DKC1-201ENST00000369550 CNTNAP5Q8WYK1 1306 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 LRRC53A6NM62 1247 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 IRS4O14654 1257 aaPredicted RBP18.67■□□□□ 0.58
DKC1-201ENST00000369550 ADAMTS3O15072 1205 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 NKRFO15226 690 aaKnown RBP eCLIP18.67■□□□□ 0.58
DKC1-201ENST00000369550 ODF2Q5BJF6 829 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 CCDC50Q8IVM0 306 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 SRBD1Q8N5C6 995 aaKnown RBP18.67■□□□□ 0.58
DKC1-201ENST00000369550 GMNCA6NCL1 334 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 TMCO5BA8MYB1 307 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 ATP2C2O75185 946 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 TRADDQ15628 312 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 FUKQ8N0W3 1084 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 KBTBD4Q9NVX7 518 aa18.67■□□□□ 0.58
DKC1-201ENST00000369550 DDX20Q9UHI6 824 aaKnown RBP18.67■□□□□ 0.58
DKC1-201ENST00000369550 LCA5LO95447 670 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 ASIC1P78348 528 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 STK4Q13043 487 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 E2F5Q15329 346 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 TDRD12Q587J7 1177 aaKnown RBP18.66■□□□□ 0.58
DKC1-201ENST00000369550 HAUS2Q9NVX0 235 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 BCCIPQ9P287 314 aaKnown RBP eCLIP18.66■□□□□ 0.58
DKC1-201ENST00000369550 GCFC2P16383 781 aaKnown RBP18.66■□□□□ 0.58
DKC1-201ENST00000369550 SLC1A4P43007 532 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 AEBP2Q6ZN18 517 aaPredicted RBP18.66■□□□□ 0.58
DKC1-201ENST00000369550 C4orf32Q8N8J7 132 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 SGSM3Q96HU1 749 aa18.66■□□□□ 0.58
DKC1-201ENST00000369550 TRMT112Q9UI30 125 aaKnown RBP18.66■□□□□ 0.58
DKC1-201ENST00000369550 BAZ2BQ9UIF8 2168 aaKnown RBP18.65■□□□□ 0.58
DKC1-201ENST00000369550 SRRM3A6NNA2 597 aaPredicted RBP18.65■□□□□ 0.58
DKC1-201ENST00000369550 CLSTN1O94985 981 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 FTCDO95954 541 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 FCER1AP12319 257 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 VEGFAP15692 232 aaPredicted RBP18.65■□□□□ 0.58
DKC1-201ENST00000369550 CYP7A1P22680 504 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 CACNA2D4Q7Z3S7 1137 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 TMC4Q7Z404 712 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 C1orf131Q8NDD1 294 aaKnown RBP18.65■□□□□ 0.58
DKC1-201ENST00000369550 NDST4Q9H3R1 872 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 BTG4Q9NY30 223 aa18.65■□□□□ 0.58
DKC1-201ENST00000369550 TMOD3Q9NYL9 352 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms