RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 RABGAP1Q9Y3P9 1069 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 COL15A1P39059 1388 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 PP2D1A8MPX8 630 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 GCFC2P16383 781 aaKnown RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 ATP1A2P50993 1020 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 CEP85LQ5SZL2 805 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 TBC1D9BQ66K14 1250 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 E4F1Q66K89 784 aaPredicted RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 ADAT2Q7Z6V5 191 aaKnown RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 ENGASEQ8NFI3 743 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 FAM71BQ8TC56 605 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 DBNDD1Q9H9R9 158 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 LARSQ9P2J5 1176 aaKnown RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 MKRN1Q9UHC7 482 aaKnown RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 GJA3Q9Y6H8 435 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 MEIS1O00470 390 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 POLR2MP0CAP2 368 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 INPP5BP32019 993 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 ZNF365Q70YC5 407 aa17.97■□□□□ 0.47
SCAF1-201ENST00000360565 IQCGQ9H095 443 aaKnown RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.97■□□□□ 0.47
SCAF1-201ENST00000360565 SF3A3Q12874 501 aaKnown RBP eCLIP17.96■□□□□ 0.479e-6■■□□□ 12.4
SCAF1-201ENST00000360565 SWAP70Q9UH65 585 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 NARFQ9UHQ1 456 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 PPEF1O14829 653 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-201ENST00000360565 CCDC170Q8IYT3 715 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 EPC1Q9H2F5 836 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 EPB41L4AQ9HCS5 686 aaPredicted RBP17.96■□□□□ 0.47
SCAF1-201ENST00000360565 HPS5Q9UPZ3 1129 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 ALAS1P13196 640 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 UBXN2AP68543 259 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 SH3GLB2Q9NR46 395 aa17.96■□□□□ 0.47
SCAF1-201ENST00000360565 MYOM1P52179 1685 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 GDF11O95390 407 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 GTF2A1P52655 376 aaPredicted RBP17.95■□□□□ 0.46
SCAF1-201ENST00000360565 GNGT1P63211 74 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 ODR4Q5SWX8 454 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 SMIM5Q71RC9 77 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 NLGN1Q8N2Q7 840 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 KANSL2Q9H9L4 492 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 ABHD10Q9NUJ1 306 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 FAN1Q9Y2M0 1017 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 NAA35Q5VZE5 725 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 FAM204AQ9H8W3 233 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 ADGRG1Q9Y653 693 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 DIP2BQ9P265 1576 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 CTNNA1P35221 906 aaKnown RBP17.95■□□□□ 0.46
SCAF1-201ENST00000360565 SRBD1Q8N5C6 995 aaKnown RBP17.95■□□□□ 0.46
SCAF1-201ENST00000360565 PPP1R14CQ8TAE6 165 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 DPH5Q9H2P9 285 aa17.95■□□□□ 0.46
SCAF1-201ENST00000360565 MROH1Q8NDA8 1641 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 MTF1Q14872 753 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 MRPL11Q9Y3B7 192 aaKnown RBP17.94■□□□□ 0.46
SCAF1-201ENST00000360565 LGALS16A8MUM7 142 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 MOCS3O95396 460 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 MYCNP04198 464 aaPredicted RBP17.94■□□□□ 0.46
SCAF1-201ENST00000360565 FMR1Q06787 632 aaKnown RBP eCLIP17.94■□□□□ 0.461e-8■□□□□ 9.2
SCAF1-201ENST00000360565 ZNF34Q8IZ26 560 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 BCAS4Q8TDM0 211 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 CABS1Q96KC9 395 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 PICK1Q9NRD5 415 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 POTEMA6NI47 508 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 hCG_1984214I3L0E3 225 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 ZNF713Q8N859 430 aaPredicted RBP17.94■□□□□ 0.46
SCAF1-201ENST00000360565 SUPT20HQ8NEM7 779 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 CCDC127Q96BQ5 260 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 KRT12Q99456 494 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 ABCB6Q9NP58 842 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 EMILIN3Q9NT22 766 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 USP17L5A8MUK1 530 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 K7ENM7 598 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 STRN3Q13033 797 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 TXNRD1Q16881 649 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 LRCH2Q5VUJ6 765 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 STK32BQ9NY57 414 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 TUBE1Q9UJT0 475 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 USTQ9Y2C2 406 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 JRKLQ9Y4A0 524 aa17.94■□□□□ 0.46
SCAF1-201ENST00000360565 TESPA1A2RU30 521 aaPredicted RBP17.93■□□□□ 0.46
SCAF1-201ENST00000360565 CLIC2O15247 247 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 ZBED4O75132 1171 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 KIF11P52732 1056 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 ATP2C1P98194 919 aaPredicted RBP17.93■□□□□ 0.46
SCAF1-201ENST00000360565 STAG2Q8N3U4 1231 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 FBF1Q8TES7 1133 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 CSRNP1Q96S65 589 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 IRX2Q9BZI1 471 aaPredicted RBP17.93■□□□□ 0.46
SCAF1-201ENST00000360565 PPANQ9NQ55 473 aaKnown RBP17.93■□□□□ 0.46
SCAF1-201ENST00000360565 NKIRAS1Q9NYS0 192 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 DKC1O60832 514 aaKnown RBP eCLIP17.93■□□□□ 0.46
SCAF1-201ENST00000360565 KCTD16Q68DU8 428 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 NLRX1Q86UT6 975 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 FAM133AQ8N9E0 248 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 FUCA2Q9BTY2 467 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 CD209Q9NNX6 404 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 E7EVH7 732 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 FTCDO95954 541 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 PLA2G4BP0C869 781 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 ZBTB16Q05516 673 aa17.93■□□□□ 0.46
SCAF1-201ENST00000360565 C2orf54Q08AI8 447 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms