RNA–Protein interactions for RNA: ENST00000360299.9

RAB5B-201, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 5,340 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-201ENST00000360299 FBXO40Q9UH90 709 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 ATP11BQ9Y2G3 1177 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 PCDHB13Q9Y5F0 798 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 PCDHA1Q9Y5I3 950 aa7.79□□□□□ -1.16
RAB5B-201ENST00000360299 KDM6AO15550 1401 aaPredicted RBP7.79□□□□□ -1.16
RAB5B-201ENST00000360299 CSF1RP07333 972 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 HTRA3P83110 453 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 PROM2Q8N271 834 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 GOLGA1Q92805 767 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 SLC4A9Q96Q91 983 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 SH3GLB2Q9NR46 395 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 HERC5Q9UII4 1024 aaKnown RBP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 RIPOR2Q9Y4F9 1068 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.78□□□□□ -1.161e-6■■■■□ 19.4
RAB5B-201ENST00000360299 ZNF541Q9H0D2 1346 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 CYP2E1P05181 493 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 YBX3P16989 372 aaKnown RBP eCLIP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 SPECC1Q5M775 1068 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 DPH6Q7L8W6 267 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 TAX1BP1Q86VP1 789 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 TRPM4Q8TD43 1214 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 STK36Q9NRP7 1315 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 USP54Q70EL1 1684 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 MMP1P03956 469 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 KLRK1P26718 216 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 TM4SF1P30408 202 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 INF2Q27J81 1249 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 NELFBQ8WX92 580 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 VPS16Q9H269 839 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 FAM208AQ9UK61 1670 aaKnown RBP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 CCDC169A6NNP5 214 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 KIF28PB7ZC32 967 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 RARBP10826 455 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 KCNA4P22459 653 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 ERCC5P28715 1186 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 DDIT3P35638 169 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 DNA2P51530 1060 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 PTGDRQ13258 359 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 SYDE2Q5VT97 1194 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 C3orf67Q6ZVT6 689 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 SLC17A8Q8NDX2 589 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 DPF2Q92785 391 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 NAP1L3Q99457 506 aaPredicted RBP7.78□□□□□ -1.16
RAB5B-201ENST00000360299 LTN1O94822 1766 aa7.78□□□□□ -1.16
RAB5B-201ENST00000360299 MACROD2A1Z1Q3 448 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 STAT3P40763 770 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 PSMC4P43686 418 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 RNASELQ05823 741 aaKnown RBP7.77□□□□□ -1.16
RAB5B-201ENST00000360299 DCAF17Q5H9S7 520 aaPredicted RBP7.77□□□□□ -1.16
RAB5B-201ENST00000360299 SPECC1LQ69YQ0 1117 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 FAM160B2Q86V87 743 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 MRFAP1L1Q96HT8 127 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 VPS33BQ9H267 617 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 KCNQ5Q9NR82 932 aa7.77□□□□□ -1.16
RAB5B-201ENST00000360299 ZNF215Q9UL58 517 aaPredicted RBP7.77□□□□□ -1.16
RAB5B-201ENST00000360299 SHTN1A0MZ66 631 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 PDHXO00330 501 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 CYP2D6P10635 497 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 SNX16P57768 344 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 PPP2R3AQ06190 1150 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 CCDC122Q5T0U0 273 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 MOB2Q70IA6 237 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 CCDC91Q7Z6B0 441 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 MYOCDQ8IZQ8 938 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 MYCT1Q8N699 235 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 C7orf31Q8N865 590 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 LINC00301Q8NCQ3 95 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 LRRC45Q96CN5 670 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 PPP1R16BQ96T49 567 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 METTL14Q9HCE5 456 aaKnown RBP7.77□□□□□ -1.17
RAB5B-201ENST00000360299 LARSQ9P2J5 1176 aaKnown RBP7.77□□□□□ -1.17
RAB5B-201ENST00000360299 COL4A3BPQ9Y5P4 624 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 RGPD2P0DJD1 1756 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 CHD2O14647 1828 aaKnown RBP7.77□□□□□ -1.17
RAB5B-201ENST00000360299 SPDYE2BA6NHP3 402 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 SPDYE6P0CI01 402 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 RGS2P41220 211 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 CLUL1Q15846 466 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 ARL6IP4Q66PJ3 421 aaKnown RBP7.77□□□□□ -1.17
RAB5B-201ENST00000360299 MIER3Q7Z3K6 550 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 DDX25Q9UHL0 483 aaKnown RBP7.77□□□□□ -1.17
RAB5B-201ENST00000360299 PPP2R3BQ9Y5P8 575 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 TMOD1P28289 359 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 KRT9P35527 623 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 C1QTNF8P60827 252 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 SP3Q02447 781 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 FAM117BQ6P1L5 589 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 RNF207Q6ZRF8 634 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 GUCA1BQ9UMX6 200 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 AKT3Q9Y243 479 aa7.77□□□□□ -1.17
RAB5B-201ENST00000360299 C19orf81C9J6K1 198 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 BCRP11274 1271 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 EIF2AK2P19525 551 aaKnown RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 ZNF569Q5MCW4 686 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 SPATA1Q5VX52 437 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 SCYL3Q8IZE3 742 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 TEKT3Q9BXF9 490 aa7.76□□□□□ -1.17
RAB5B-201ENST00000360299 FAM49AQ9H0Q0 323 aaPredicted RBP7.76□□□□□ -1.17
RAB5B-201ENST00000360299 STK17AQ9UEE5 414 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms