RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 POTEB2H3BUK9 544 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 WNT7AO00755 349 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 F13A1P00488 732 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 AP3B2Q13367 1082 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 IL31RAQ8NI17 732 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 GJD2Q9UKL4 321 aa29.02■■■□□ 2.24
SSBP3-202ENST00000357475 LRRC37A2A6NM11 1700 aa29.01■■■□□ 2.24
SSBP3-202ENST00000357475 EIF2AK2P19525 551 aaKnown RBP29.01■■■□□ 2.23
SSBP3-202ENST00000357475 INF2Q27J81 1249 aa29.01■■■□□ 2.23
SSBP3-202ENST00000357475 KRT25Q7Z3Z0 450 aa29.01■■■□□ 2.23
SSBP3-202ENST00000357475 RMDN3Q96TC7 470 aa29.01■■■□□ 2.23
SSBP3-202ENST00000357475 GABRQQ9UN88 632 aa29.01■■■□□ 2.23
SSBP3-202ENST00000357475 CCDC194A0A1B0GVG4 234 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 FKTNO75072 461 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 ZNF792Q3KQV3 632 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 NPLOC4Q8TAT6 608 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 USP6NLQ92738 828 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 CHAMP1Q96JM3 812 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 ZFP91Q96JP5 570 aaPredicted RBP29■■■□□ 2.23
SSBP3-202ENST00000357475 PXMP2Q9NR77 195 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 RPTORQ8N122 1335 aa29■■■□□ 2.23
SSBP3-202ENST00000357475 FRMPD4Q14CM0 1322 aa28.99■■■□□ 2.23
SSBP3-202ENST00000357475 NONOQ15233 471 aaKnown RBP eCLIP28.99■■■□□ 2.231e-6■■■□□ 17.3
SSBP3-202ENST00000357475 FOXD4L6Q3SYB3 417 aaPredicted RBP28.99■■■□□ 2.23
SSBP3-202ENST00000357475 FOXD4L3Q6VB84 417 aaPredicted RBP28.99■■■□□ 2.23
SSBP3-202ENST00000357475 TBCKQ8TEA7 893 aa28.99■■■□□ 2.23
SSBP3-202ENST00000357475 CIZ1Q9ULV3 898 aaPredicted RBP28.99■■■□□ 2.23
SSBP3-202ENST00000357475 FOSP01100 380 aaPredicted RBP28.99■■■□□ 2.23
SSBP3-202ENST00000357475 MAF1Q9H063 256 aa28.99■■■□□ 2.23
SSBP3-202ENST00000357475 CHMP5Q9NZZ3 219 aa28.99■■■□□ 2.23
SSBP3-202ENST00000357475 CASP8AP2Q9UKL3 1982 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 FOXN1O15353 648 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 TOB1P50616 345 aaPredicted RBP28.98■■■□□ 2.23
SSBP3-202ENST00000357475 ALDH5A1P51649 535 aaPredicted RBP28.98■■■□□ 2.23
SSBP3-202ENST00000357475 NUCB2P80303 420 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 MAP2K5Q13163 448 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 NBR1Q14596 966 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 KIF22Q14807 665 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 ARHGEF16Q5VV41 709 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 DPP9Q86TI2 863 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 TEX2Q8IWB9 1127 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 CRYGNQ8WXF5 182 aa28.98■■■□□ 2.23
SSBP3-202ENST00000357475 HTTP42858 3142 aa28.97■■■□□ 2.23
SSBP3-202ENST00000357475 SREBF1P36956 1147 aa28.97■■■□□ 2.23
SSBP3-202ENST00000357475 PRKCZQ05513 592 aa28.97■■■□□ 2.23
SSBP3-202ENST00000357475 PGM5Q15124 567 aa28.97■■■□□ 2.23
SSBP3-202ENST00000357475 NUDT12Q9BQG2 462 aa28.97■■■□□ 2.23
SSBP3-202ENST00000357475 PDCD2LQ9BRP1 358 aa28.97■■■□□ 2.23
SSBP3-202ENST00000357475 PDIA4P13667 645 aaKnown RBP28.96■■■□□ 2.23
SSBP3-202ENST00000357475 ATP2B1P20020 1258 aa28.96■■■□□ 2.23
SSBP3-202ENST00000357475 CYP2B6P20813 491 aa28.96■■■□□ 2.23
SSBP3-202ENST00000357475 ARHGAP4P98171 946 aa28.96■■■□□ 2.23
SSBP3-202ENST00000357475 NSUN6Q8TEA1 469 aaKnown RBP28.96■■■□□ 2.23
SSBP3-202ENST00000357475 HSPA1AP0DMV8 641 aaKnown RBP28.95■■■□□ 2.23
SSBP3-202ENST00000357475 HSPA1BP0DMV9 641 aaKnown RBP28.95■■■□□ 2.23
SSBP3-202ENST00000357475 BRAPQ7Z569 592 aa28.95■■■□□ 2.23
SSBP3-202ENST00000357475 ERO1AQ96HE7 468 aa28.95■■■□□ 2.23
SSBP3-202ENST00000357475 CENPFP49454 3210 aa28.95■■■□□ 2.22
SSBP3-202ENST00000357475 HSPA8P11142 646 aaKnown RBP28.94■■■□□ 2.22
SSBP3-202ENST00000357475 CCL14Q16627 93 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 MYSM1Q5VVJ2 828 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 MCTP2Q6DN12 878 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 DNERQ8NFT8 737 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 SOCS4Q8WXH5 440 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 MAML3Q96JK9 1138 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 FTOQ9C0B1 505 aaKnown RBP eCLIP28.94■■■□□ 2.221e-6■■□□□ 11.8
SSBP3-202ENST00000357475 ZSCAN16Q9H4T2 348 aaPredicted RBP28.94■■■□□ 2.22
SSBP3-202ENST00000357475 FLRT1Q9NZU1 646 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 FLT3LGP49771 235 aa28.94■■■□□ 2.22
SSBP3-202ENST00000357475 MRPS9P82933 396 aaKnown RBP28.94■■■□□ 2.22
SSBP3-202ENST00000357475 TCHHQ07283 1943 aa28.93■■■□□ 2.22
SSBP3-202ENST00000357475 TDP2O95551 362 aa28.93■■■□□ 2.22
SSBP3-202ENST00000357475 NR3C2P08235 984 aa28.93■■■□□ 2.22
SSBP3-202ENST00000357475 MYCLP12524 364 aaPredicted RBP28.93■■■□□ 2.22
SSBP3-202ENST00000357475 LETM2Q2VYF4 491 aa28.93■■■□□ 2.22
SSBP3-202ENST00000357475 NEK8Q86SG6 692 aa28.93■■■□□ 2.22
SSBP3-202ENST00000357475 CYP2W1Q8TAV3 490 aa28.93■■■□□ 2.22
SSBP3-202ENST00000357475 ADD3Q9UEY8 706 aaKnown RBP28.93■■■□□ 2.22
SSBP3-202ENST00000357475 HOXC6P09630 235 aa28.92■■■□□ 2.22
SSBP3-202ENST00000357475 EDNRBP24530 442 aa28.92■■■□□ 2.22
SSBP3-202ENST00000357475 RGS2P41220 211 aa28.92■■■□□ 2.22
SSBP3-202ENST00000357475 PCDHB6Q9Y5E3 794 aa28.92■■■□□ 2.22
SSBP3-202ENST00000357475 KIAA1217Q5T5P2 1943 aa28.91■■■□□ 2.22
SSBP3-202ENST00000357475 PCNX4Q63HM2 1172 aa28.91■■■□□ 2.22
SSBP3-202ENST00000357475 APBA2Q99767 749 aa28.91■■■□□ 2.22
SSBP3-202ENST00000357475 EHMT1Q9H9B1 1298 aa28.91■■■□□ 2.22
SSBP3-202ENST00000357475 RTEL1Q9NZ71 1219 aa28.91■■■□□ 2.22
SSBP3-202ENST00000357475 SRRDQ9UH36 339 aa28.91■■■□□ 2.22
SSBP3-202ENST00000357475 DIS3Q9Y2L1 958 aaKnown RBP28.91■■■□□ 2.22
SSBP3-202ENST00000357475 FAM86B1E9PN63 330 aa28.9■■■□□ 2.22
SSBP3-202ENST00000357475 FAM86B2P0C5J1 330 aa28.9■■■□□ 2.22
SSBP3-202ENST00000357475 VSIG10LQ86VR7 867 aa28.9■■■□□ 2.22
SSBP3-202ENST00000357475 CYP3A4P08684 503 aa28.89■■■□□ 2.22
SSBP3-202ENST00000357475 ZNF174Q15697 407 aa28.89■■■□□ 2.22
SSBP3-202ENST00000357475 TTC38Q5R3I4 469 aa28.89■■■□□ 2.22
SSBP3-202ENST00000357475 ARMCX2Q7L311 632 aa28.89■■■□□ 2.22
SSBP3-202ENST00000357475 ITGB5P18084 799 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 USP11P51784 963 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 LBX1P52954 281 aa28.89■■■□□ 2.21
SSBP3-202ENST00000357475 DNM1Q05193 864 aaKnown RBP28.89■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms