RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 OTUD7AQ8TE49 926 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 RNF25Q96BH1 459 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 GSDMAQ96QA5 445 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 C2orf49Q9BVC5 232 aaPredicted RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 SEPT10Q9P0V9 454 aa9.42□□□□□ -0.9
TDP1-201ENST00000335725 FAM32AQ9Y421 112 aaKnown RBP9.42□□□□□ -0.9
TDP1-201ENST00000335725 ABCC10Q5T3U5 1492 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 IFT140Q96RY7 1462 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 BTBD19C9JJ37 291 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 LGR5O75473 907 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 GNA14O95837 355 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 PAEPP09466 180 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 KCNA3P22001 575 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 CALB2P22676 271 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 IL4RP24394 825 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 RAB15P59190 212 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ITGB3BPQ13352 177 aaPredicted RBP9.41□□□□□ -0.9
TDP1-201ENST00000335725 TRIM29Q14134 588 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ADRM1Q16186 407 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 OLFML2BQ68BL8 750 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 CCDC129Q6ZRS4 1044 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 C3orf67Q6ZVT6 689 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ZNF804AQ7Z570 1209 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 KLHL29Q96CT2 875 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 CCDC42Q96M95 316 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 SNX14Q9Y5W7 946 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 HECW2Q9P2P5 1572 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 EIF2S1P05198 315 aaKnown RBP9.41□□□□□ -0.9
TDP1-201ENST00000335725 GNAZP19086 355 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ERCC5P28715 1186 aaPredicted RBP9.41□□□□□ -0.9
TDP1-201ENST00000335725 VAV2P52735 878 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 RAD23BP54727 409 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.41□□□□□ -0.9
TDP1-201ENST00000335725 FSIP1Q8NA03 581 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 RETREG2Q8NC44 543 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 RBBP8NLQ8NC74 664 aaPredicted RBP9.41□□□□□ -0.9
TDP1-201ENST00000335725 ARHGEF38Q9NXL2 777 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ADAM22Q9P0K1 906 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 RCOR1Q9UKL0 485 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 SLC30A1Q9Y6M5 507 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 PTCH1Q13635 1447 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ITIH6Q6UXX5 1313 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 WNT7AO00755 349 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 S100A5P33763 92 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 SARSP49591 514 aaKnown RBP9.41□□□□□ -0.9
TDP1-201ENST00000335725 RAB17Q9H0T7 212 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 PARVGQ9HBI0 331 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 ZNF304Q9HCX3 659 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 NDUFA13Q9P0J0 144 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 SAMD15Q9P1V8 674 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 CYP46A1Q9Y6A2 500 aa9.41□□□□□ -0.9
TDP1-201ENST00000335725 SLC3A2P08195 630 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 KCNA1Q09470 495 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 DDB1Q16531 1140 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 NDUFA5Q16718 116 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.4□□□□□ -0.9
TDP1-201ENST00000335725 SPDYCQ5MJ68 293 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 CABP7Q86V35 215 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 PPFIBP1Q86W92 1011 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 GSPT2Q8IYD1 628 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 ZNF713Q8N859 430 aaPredicted RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 ENGASEQ8NFI3 743 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 SRPK1Q96SB4 655 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 ESF1Q9H501 851 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 RNPEPL1Q9HAU8 725 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 EIF2AK4Q9P2K8 1649 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 TEX28O15482 410 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 CBFA2T3O75081 653 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 ALDH1L1O75891 902 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 PARNO95453 639 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 ASMTLO95671 621 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 LMNAP02545 664 aaKnown RBP9.4□□□□□ -0.9
TDP1-201ENST00000335725 TNFRSF8P28908 595 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 KIF11P52732 1056 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 GOLGA8FQ08AF8 430 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 GOLGA8DPQ0D2H9 430 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 KIF22Q14807 665 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 GSTA3Q16772 222 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 FOXB2Q5VYV0 432 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 OLFM4Q6UX06 510 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 TRPM8Q7Z2W7 1104 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 C14orf80Q86SX3 495 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 ESX1Q8N693 406 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.4□□□□□ -0.9
TDP1-201ENST00000335725 AS3MTQ9HBK9 375 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 LNPEPQ9UIQ6 1025 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 COMMD10Q9Y6G5 202 aa9.4□□□□□ -0.9
TDP1-201ENST00000335725 ZMYND10O75800 440 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 PYGMP11217 842 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 BIRC3Q13489 604 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 LRP8Q14114 963 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 WTAPQ15007 396 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 CCDC122Q5T0U0 273 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 DIS3LQ8TF46 1054 aaKnown RBP9.4□□□□□ -0.91
TDP1-201ENST00000335725 MRPS27Q92552 414 aaKnown RBP9.4□□□□□ -0.91
TDP1-201ENST00000335725 CCDC51Q96ER9 411 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 TM6SF1Q9BZW5 370 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 KRT23Q9C075 422 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 FAIMQ9NVQ4 179 aa9.4□□□□□ -0.91
TDP1-201ENST00000335725 MYO5CQ9NQX4 1742 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms