RNA–Protein interactions for RNA: ENST00000329397.5

PTP4A3-201, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A3, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-201ENST00000329397 IFIH1Q9BYX4 1025 aaKnown RBP19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 ANKRD2Q9GZV1 360 aa19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 RRP15Q9Y3B9 282 aaKnown RBP19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 ZC3H4Q9UPT8 1303 aaKnown RBP19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 RREB1Q92766 1687 aa19.33■□□□□ 0.69
PTP4A3-201ENST00000329397 SLC37A4O43826 429 aa19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 FAM98CQ17RN3 349 aaKnown RBP19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 DAGLBQ8NCG7 672 aa19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 CEP95Q96GE4 821 aa19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 RSPH14Q9UHP6 348 aa19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 DMGDHQ9UI17 866 aaKnown RBP19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 SALL4Q9UJQ4 1053 aa19.33■□□□□ 0.68
PTP4A3-201ENST00000329397 TM4SF1P30408 202 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 EIF4A3P38919 411 aaKnown RBP19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 VAV2P52735 878 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 APBA1Q02410 837 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 KCTD19Q17RG1 926 aaPredicted RBP19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 SLC10A5Q5PT55 438 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 ZNF622Q969S3 477 aaKnown RBP eCLIP19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 DEF6Q9H4E7 631 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 BICDL2A1A5D9 508 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 USP17L5A8MUK1 530 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 GRB10Q13322 594 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 SPA17Q15506 151 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 LRRC31Q6UY01 552 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 RRAGAQ7L523 313 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 KCNK18Q7Z418 384 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 LRRC1Q9BTT6 524 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 BLOC1S4Q9NUP1 217 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 EP400Q96L91 3159 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 LRRC53A6NM62 1247 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 BUB1O43683 1085 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 CDK8P49336 464 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 KIF11P52732 1056 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 TUBB4BP68371 445 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 SRLQ86TD4 932 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 CCDC47Q96A33 483 aaKnown RBP19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 C7orf25Q9BPX7 421 aa19.32■□□□□ 0.68
PTP4A3-201ENST00000329397 PRPF6O94906 941 aaKnown RBP19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 PRPHP41219 470 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 BTDP43251 543 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 ENOX2Q16206 610 aaKnown RBP19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 AMOTL1Q8IY63 956 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 NDST4Q9H3R1 872 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 CWC15Q9P013 229 aaKnown RBP19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 PCDHA13Q9Y5I0 950 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 SOGA3Q5TF21 947 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 SPTY2D1Q68D10 685 aaPredicted RBP19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 KRT25Q7Z3Z0 450 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 CREG2Q8IUH2 290 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 LRRC47Q8N1G4 583 aaKnown RBP19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 EHBP1Q8NDI1 1231 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 ANKS1AQ92625 1134 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 NUP58Q9BVL2 599 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 NLRC4Q9NPP4 1024 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 TBC1D7Q9P0N9 293 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 SNED1Q8TER0 1413 aa19.31■□□□□ 0.68
PTP4A3-201ENST00000329397 IRS2Q9Y4H2 1338 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 AGPSO00116 658 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 AKR1B10O60218 316 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 GFPT1Q06210 699 aaPredicted RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 CKAP4Q07065 602 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 CCDC170Q8IYT3 715 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 REXO1Q8N1G1 1221 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 NOC3LQ8WTT2 800 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 SMARCC1Q92922 1105 aaPredicted RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 PNMA5Q96PV4 448 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 TANGO6Q9C0B7 1094 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 EHD4Q9H223 541 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 POLD4Q9HCU8 107 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 C6orf50Q9HD87 102 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 MED4Q9NPJ6 270 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 SEC63Q9UGP8 760 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 LAD1O00515 517 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 MYL1P05976 194 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 VWA3BQ502W6 1294 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 ZSCAN29Q8IWY8 852 aaPredicted RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 AFAP1L1Q8TED9 768 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 CALML4Q96GE6 196 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 PURBQ96QR8 312 aaKnown RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 ERGIC2Q96RQ1 377 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 CRACR2AQ9BSW2 395 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 ACBD3Q9H3P7 528 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 SIK3Q9Y2K2 1263 aa19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 COL5A3P25940 1745 aaPredicted RBP19.3■□□□□ 0.68
PTP4A3-201ENST00000329397 CACNB1Q02641 598 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 DNAJC21Q5F1R6 531 aaKnown RBP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 TTC19Q6DKK2 380 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 CNNM4Q6P4Q7 775 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 TPTE2Q6XPS3 522 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 CCNI2Q6ZMN8 369 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 SND1Q7KZF4 910 aaKnown RBP eCLIP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 FAM114A1Q8IWE2 563 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 AK8Q96MA6 479 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 CDCA7Q9BWT1 371 aaPredicted RBP19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 SNX12Q9UMY4 172 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 BAG3O95817 575 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 CALCRLQ16602 461 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 SV2BQ7L1I2 683 aa19.29■□□□□ 0.68
PTP4A3-201ENST00000329397 MS4A14Q96JA4 679 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms