RNA–Protein interactions for RNA: ENST00000309534.10

CGGBP1-201, Transcript of CGG triplet repeat binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGGBP1, Length 4,495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGGBP1-201ENST00000309534 TNS1Q9HBL0 1735 aaKnown RBP17.45■□□□□ 0.38
CGGBP1-201ENST00000309534 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 EARS2Q5JPH6 523 aaKnown RBP17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 RBM46Q8TBY0 533 aaKnown RBP17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 FAM13AO94988 1023 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 TDP2O95551 362 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 IRX3P78415 501 aaPredicted RBP17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 PSMD2Q13200 908 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 RWDD2AQ9UIY3 292 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 GOLGA6L9A6NEM1 432 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 KCNB1Q14721 858 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 KCTD17Q8N5Z5 321 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 ANKRD31Q8N7Z5 1873 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 GGA3Q9NZ52 723 aa17.44■□□□□ 0.38
CGGBP1-201ENST00000309534 SKILP12757 684 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 LDHDQ86WU2 507 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 FANCLQ9NW38 375 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 PLA2G6O60733 806 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 KCNA3P22001 575 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 SNAP25P60880 206 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 SPP2Q13103 211 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 PRKG1Q13976 671 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 ZNF280CQ8ND82 737 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 ACER1Q8TDN7 264 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 KIAA1683Q9H0B3 1180 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 LRCH2Q5VUJ6 765 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 HOXC10Q9NYD6 342 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 TUBB4AP04350 444 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 GRIN1Q05586 938 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 ARHGEF16Q5VV41 709 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 TYW1BQ6NUM6 668 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 DHX40Q8IX18 779 aaKnown RBP17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 TMEM60Q9H2L4 133 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 ADARB2Q9NS39 739 aaKnown RBP17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 HOMER2Q9NSB8 354 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 ZHX2Q9Y6X8 837 aa17.43■□□□□ 0.38
CGGBP1-201ENST00000309534 PVALEFA0A1B0GWK0 134 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 NFKBIEO00221 500 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 CDC25AP30304 524 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 CSGALNACT2Q8N6G5 542 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 DNAJC18Q9H819 358 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 MAP3K20Q9NYL2 800 aaKnown RBP17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 CASZ1Q86V15 1759 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 BAZ2BQ9UIF8 2168 aaKnown RBP17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 ECE1P42892 770 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 DPYDQ12882 1025 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 NOLC1Q14978 699 aaKnown RBP eCLIP17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 GPBP1Q86WP2 473 aa17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 TRMT44Q8IYL2 757 aaKnown RBP17.42■□□□□ 0.38
CGGBP1-201ENST00000309534 PRR29P0C7W0 189 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 HOXA13P31271 388 aaPredicted RBP17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 GNPTABQ3T906 1256 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 UPF1Q92900 1129 aaKnown RBP eCLIP17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 USP49Q70CQ1 688 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 ZNF592Q92610 1267 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 IQCDQ96DY2 449 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 KIAA1024Q9UPX6 916 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 IQCA1LA6NCM1 817 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 DYMQ7RTS9 669 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 ZNF577Q9BSK1 485 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 LUC7LQ9NQ29 371 aaKnown RBP17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 MYCLP12524 364 aaPredicted RBP17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 TKFCQ3LXA3 575 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 RASGRP2Q7LDG7 609 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 MIER3Q7Z3K6 550 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 CNGA4Q8IV77 575 aa17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 ZNF830Q96NB3 372 aaPredicted RBP17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 RPAP3Q9H6T3 665 aaPredicted RBP17.41■□□□□ 0.38
CGGBP1-201ENST00000309534 RPL13P26373 211 aaKnown RBP17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 HSP90AA4PQ58FG1 418 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 HERC4Q5GLZ8 1057 aaPredicted RBP17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 RAD54LQ92698 747 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 ARHGEF35A5YM69 484 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 GRIN3BO60391 1043 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 MTMR2Q13614 643 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 CUL4BQ13620 913 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 UNC13DQ70J99 1090 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 NEK9Q8TD19 979 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 CDHR1Q96JP9 859 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 GPRC5DQ9NZD1 345 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 CHMP2AO43633 222 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 KMT5BQ4FZB7 885 aa17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 NOM1Q5C9Z4 860 aaKnown RBP17.4■□□□□ 0.38
CGGBP1-201ENST00000309534 FZD9O00144 591 aa17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 ICAM1P05362 532 aa17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 PTPN14Q15678 1187 aa17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 NPY5RQ15761 445 aa17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 PANK4Q9NVE7 773 aa17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 R3HCC1Q9Y3T6 440 aaKnown RBP17.39■□□□□ 0.38
CGGBP1-201ENST00000309534 MYH6P13533 1939 aa17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 ZNF500O60304 480 aaPredicted RBP17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 SREBF1P36956 1147 aa17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 EAPPQ56P03 285 aaPredicted RBP17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 SPECC1LQ69YQ0 1117 aa17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 A0A087WWV3 80 aa17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 NT5DC1Q5TFE4 455 aa17.39■□□□□ 0.37
CGGBP1-201ENST00000309534 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms