RNA–Protein interactions for RNA: ENST00000305978.6

SCAND1-201, Transcript of SCAN domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAND1, Length 902 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAND1-201ENST00000305978 PPP2R5BQ15173 497 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 HOMER1Q86YM7 354 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 FAM126BQ8IXS8 530 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 PIGSQ96S52 555 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 RMDN3Q96TC7 470 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 GPHNQ9NQX3 736 aaPredicted RBP18.09■□□□□ 0.49
SCAND1-201ENST00000305978 PCDHA1Q9Y5I3 950 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 TRIP12Q14669 1992 aaPredicted RBP18.09■□□□□ 0.49
SCAND1-201ENST00000305978 GBF1Q92538 1859 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 TANC1Q9C0D5 1861 aa18.09■□□□□ 0.49
SCAND1-201ENST00000305978 GRIN2DO15399 1336 aa18.08■□□□□ 0.49
SCAND1-201ENST00000305978 NKRFO15226 690 aaKnown RBP eCLIP18.08■□□□□ 0.48
SCAND1-201ENST00000305978 CFBP00751 764 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 CPT1AP50416 773 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 COL9A3Q14050 684 aaPredicted RBP18.08■□□□□ 0.48
SCAND1-201ENST00000305978 SHHQ15465 462 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 C9orf50Q5SZB4 431 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 CASC1Q6TDU7 716 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 ZNF654Q8IZM8 581 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 OR6J1Q8NGC5 347 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 IWS1Q96ST2 819 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 MAP3K14Q99558 947 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 SCN5AQ14524 2016 aa18.08■□□□□ 0.48
SCAND1-201ENST00000305978 SH2B2O14492 632 aaPredicted RBP18.07■□□□□ 0.48
SCAND1-201ENST00000305978 TLR3O15455 904 aaKnown RBP18.07■□□□□ 0.48
SCAND1-201ENST00000305978 DDAH1O94760 285 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 ARIH2O95376 493 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 TIMP1P01033 207 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 CD4P01730 458 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 TRAF1Q13077 416 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 ITGA7Q13683 1181 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 TTLL4Q14679 1199 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 CCDC136Q96JN2 1154 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 TMEM87BQ96K49 555 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 SEZ6LQ9BYH1 1024 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 POLR3EQ9NVU0 708 aa18.07■□□□□ 0.48
SCAND1-201ENST00000305978 MAP3K20Q9NYL2 800 aaKnown RBP18.07■□□□□ 0.48
SCAND1-201ENST00000305978 PNMA6FA0A0J9YX94 578 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 CDC45O75419 566 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 TXNP10599 105 aaKnown RBP18.06■□□□□ 0.48
SCAND1-201ENST00000305978 EIF2AK2P19525 551 aaKnown RBP18.06■□□□□ 0.48
SCAND1-201ENST00000305978 EPHB4P54760 987 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 PSMC6P62333 389 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 PURAQ00577 322 aaKnown RBP18.06■□□□□ 0.48
SCAND1-201ENST00000305978 FPGSQ05932 587 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 STXBP2Q15833 593 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 ARHGEF16Q5VV41 709 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 CCDC62Q6P9F0 684 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 SAMD3Q8N6K7 520 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 COPS5Q92905 334 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 MYL10Q9BUA6 226 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 PXMP2Q9NR77 195 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 CHD9Q3L8U1 2897 aa18.06■□□□□ 0.48
SCAND1-201ENST00000305978 CDH23Q9H251 3354 aa18.05■□□□□ 0.48
SCAND1-201ENST00000305978 A6NJR5 290 aa18.05■□□□□ 0.48
SCAND1-201ENST00000305978 LIFRP42702 1097 aa18.05■□□□□ 0.48
SCAND1-201ENST00000305978 BRDTQ58F21 947 aaPredicted RBP18.05■□□□□ 0.48
SCAND1-201ENST00000305978 MFSD5Q6N075 450 aa18.05■□□□□ 0.48
SCAND1-201ENST00000305978 TMTC2Q8N394 836 aa18.05■□□□□ 0.48
SCAND1-201ENST00000305978 CTCFLQ8NI51 663 aaPredicted RBP18.05■□□□□ 0.48
SCAND1-201ENST00000305978 SPZ1Q9BXG8 430 aa18.05■□□□□ 0.48
SCAND1-201ENST00000305978 NR3C2P08235 984 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 MYL3P08590 195 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 HOXA13P31271 388 aaPredicted RBP18.04■□□□□ 0.48
SCAND1-201ENST00000305978 KIF5BP33176 963 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 RNF20Q5VTR2 975 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 NFXL1Q6ZNB6 911 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 SEPT14Q6ZU15 432 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 DEFB123Q8N688 67 aa18.04■□□□□ 0.48
SCAND1-201ENST00000305978 CCDC69A6NI79 296 aa18.03■□□□□ 0.48
SCAND1-201ENST00000305978 EIF3JO75822 258 aaKnown RBP18.03■□□□□ 0.48
SCAND1-201ENST00000305978 SMARCA1P28370 1054 aa18.03■□□□□ 0.48
SCAND1-201ENST00000305978 Q7L0L9 218 aa18.03■□□□□ 0.48
SCAND1-201ENST00000305978 LZTS2Q9BRK4 669 aa18.03■□□□□ 0.48
SCAND1-201ENST00000305978 PDCD2LQ9BRP1 358 aa18.03■□□□□ 0.48
SCAND1-201ENST00000305978 MTG1Q9BT17 334 aaPredicted RBP18.03■□□□□ 0.48
SCAND1-201ENST00000305978 TRPV6Q9H1D0 765 aa18.03■□□□□ 0.48
SCAND1-201ENST00000305978 GCOM1H8Y6P7 765 aaPredicted RBP18.02■□□□□ 0.48
SCAND1-201ENST00000305978 KPNA6O60684 536 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 PLEKHA8P1O95397 391 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 GH1P01241 217 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 POLR2MP0CAP2 368 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 ARHGAP1Q07960 439 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 LY6KQ17RY6 165 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 SGMS1Q86VZ5 419 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 PIBF1Q8WXW3 757 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 RRP36Q96EU6 259 aaKnown RBP18.02■□□□□ 0.48
SCAND1-201ENST00000305978 LRRC2Q9BYS8 371 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 PPP1R12CQ9BZL4 782 aa18.02■□□□□ 0.48
SCAND1-201ENST00000305978 ALDH8A1Q9H2A2 487 aaPredicted RBP18.02■□□□□ 0.48
SCAND1-201ENST00000305978 MYO9BQ13459 2157 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 KAT6AQ92794 2004 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 B4GALT4O60513 344 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 CALM1P0DP23 149 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 CALM2P0DP24 149 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 CALM3P0DP25 149 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 RXRAP19793 462 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 GNAQP50148 359 aa18.01■□□□□ 0.47
SCAND1-201ENST00000305978 PPIGQ13427 754 aaKnown RBP eCLIP18.01■□□□□ 0.47
SCAND1-201ENST00000305978 PGM5Q15124 567 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms