RNA–Protein interactions for RNA: ENST00000297268.10

COL1A2-201, Transcript of collagen type I alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A2, Length 5,411 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-201ENST00000297268 ZNF148Q9UQR1 794 aa15.5■□□□□ 0.07
COL1A2-201ENST00000297268 BSPRYQ5W0U4 402 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 FMR1NBQ8N0W7 255 aaPredicted RBP15.49■□□□□ 0.07
COL1A2-201ENST00000297268 GSDMBQ8TAX9 411 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 GJB4Q9NTQ9 266 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 MLH3Q9UHC1 1453 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 ATP7BP35670 1465 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 SRGAP2O75044 1071 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 DHX40Q8IX18 779 aaKnown RBP15.49■□□□□ 0.07
COL1A2-201ENST00000297268 EVI5O60447 810 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 SLCO1A2P46721 670 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 RPS8P62241 208 aaKnown RBP15.49■□□□□ 0.07
COL1A2-201ENST00000297268 PI16Q6UXB8 463 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 KCNF1Q9H3M0 494 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 TOM1O60784 492 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 AFPP02771 609 aaKnown RBP15.49■□□□□ 0.07
COL1A2-201ENST00000297268 ARHGEF25Q86VW2 580 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 CPXCR1Q8N123 301 aa15.49■□□□□ 0.07
COL1A2-201ENST00000297268 TAB3Q8N5C8 712 aaPredicted RBP15.49■□□□□ 0.07
COL1A2-201ENST00000297268 CPSF1Q10570 1443 aaKnown RBP15.49■□□□□ 0.07
COL1A2-201ENST00000297268 CFAP65Q6ZU64 1925 aaKnown RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 GGCXP38435 758 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 FKBP3Q00688 224 aaKnown RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 CHRNDQ07001 517 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 PDE1CQ14123 709 aaPredicted RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 FAM102BQ5T8I3 360 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 RNF34Q969K3 372 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 ZSWIM5Q9P217 1185 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 LARSQ9P2J5 1176 aaKnown RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 SOS2Q07890 1332 aaPredicted RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 KAZNQ674X7 775 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 SPZ1Q9BXG8 430 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 PFDN4Q9NQP4 134 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 C1orf112Q9NSG2 853 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 MYL7Q01449 175 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 BFSP1Q12934 665 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 SERPING1P05155 500 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 CYP2E1P05181 493 aaPredicted RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 RBBP5Q15291 538 aaKnown RBP15.48■□□□□ 0.07
COL1A2-201ENST00000297268 SH2D4BQ5SQS7 431 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 ABHD10Q9NUJ1 306 aa15.48■□□□□ 0.07
COL1A2-201ENST00000297268 UBAP1LF5GYI3 381 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 SEMA3EO15041 775 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 PRKAB2O43741 272 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 CYP4A11Q02928 519 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 DPP8Q6V1X1 898 aaPredicted RBP15.47■□□□□ 0.07
COL1A2-201ENST00000297268 CDAN1Q8IWY9 1227 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 PARP3Q9Y6F1 533 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 ARHGEF18Q6ZSZ5 1173 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 SCYL3Q8IZE3 742 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 AP1M1Q9BXS5 423 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 Q9H521 79 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 NEK9Q8TD19 979 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 COG7P83436 770 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 TAF11Q15544 211 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 TBC1D22AQ8WUA7 517 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 CCDC127Q96BQ5 260 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 NDST4Q9H3R1 872 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 PLAAQ9Y263 795 aa15.47■□□□□ 0.07
COL1A2-201ENST00000297268 PRPF3O43395 683 aaKnown RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 CACNB1Q02641 598 aaPredicted RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 HADHQ16836 314 aaKnown RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 NSMFQ6X4W1 530 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 RABGAP1Q9Y3P9 1069 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 SERPINB6P35237 376 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 ARMCX5Q6P1M9 558 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 ANKRD35Q8N283 1001 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 GABPB2Q8TAK5 448 aaPredicted RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 GSPT2Q8IYD1 628 aaKnown RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 USH1CQ9Y6N9 552 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 STAM2O75886 525 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 ECEL1O95672 775 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 LIFRP42702 1097 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 NSFP46459 744 aaKnown RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 SNX1Q13596 522 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 PROCA1Q8NCQ7 364 aaPredicted RBP15.46■□□□□ 0.07
COL1A2-201ENST00000297268 FMO2Q99518 471 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 ST7Q9NRC1 585 aa15.46■□□□□ 0.07
COL1A2-201ENST00000297268 ZWINTO95229 277 aa15.46■□□□□ 0.06
COL1A2-201ENST00000297268 PABPC4Q13310 644 aaKnown RBP eCLIP15.46■□□□□ 0.06
COL1A2-201ENST00000297268 TMED2Q15363 201 aa15.46■□□□□ 0.06
COL1A2-201ENST00000297268 MFSD14BQ5SR56 506 aa15.46■□□□□ 0.06
COL1A2-201ENST00000297268 LCORLQ8N3X6 602 aa15.46■□□□□ 0.06
COL1A2-201ENST00000297268 USP40Q9NVE5 1235 aa15.46■□□□□ 0.06
COL1A2-201ENST00000297268 PPP1R9AQ9ULJ8 1098 aa15.46■□□□□ 0.06
COL1A2-201ENST00000297268 DLATP10515 647 aaKnown RBP15.45■□□□□ 0.06
COL1A2-201ENST00000297268 EIF3BP55884 814 aaKnown RBP15.45■□□□□ 0.06
COL1A2-201ENST00000297268 CUL1Q13616 776 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 MRFAP1Q9Y605 127 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 RASGRF2O14827 1237 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 GIPC1O14908 333 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 PLCG1P19174 1290 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 RNASELQ05823 741 aaKnown RBP15.45■□□□□ 0.06
COL1A2-201ENST00000297268 KRT81Q14533 505 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 SGO2Q562F6 1265 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 DDX27Q96GQ7 796 aaKnown RBP15.45■□□□□ 0.06
COL1A2-201ENST00000297268 TXLNGQ9NUQ3 528 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 STK17AQ9UEE5 414 aa15.45■□□□□ 0.06
COL1A2-201ENST00000297268 GDAQ9Y2T3 454 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms