RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 PCIF1Q9H4Z3 704 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 ZNF335Q9H4Z2 1342 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-201ENST00000293441 CARMIL3Q8ND23 1372 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 GTF2A1P52655 376 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-201ENST00000293441 GRAPQ13588 217 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 SUSD4Q5VX71 490 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 METTL23Q86XA0 190 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 GRAPLQ8TC17 118 aaPredicted RBP18.9■□□□□ 0.62
SHANK1-201ENST00000293441 MAP4K1Q92918 833 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 PUS7LQ9H0K6 701 aaKnown RBP18.9■□□□□ 0.62
SHANK1-201ENST00000293441 MFAP3P55082 362 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 RINT1Q6NUQ1 792 aa18.9■□□□□ 0.62
SHANK1-201ENST00000293441 PALLDQ8WX93 1383 aa18.89■□□□□ 0.62
SHANK1-201ENST00000293441 ERVV-1B6SEH8 477 aa18.89■□□□□ 0.62
SHANK1-201ENST00000293441 C21orf2O43822 256 aa18.89■□□□□ 0.62
SHANK1-201ENST00000293441 PTK2Q05397 1052 aa18.89■□□□□ 0.62
SHANK1-201ENST00000293441 SPATA1Q5VX52 437 aa18.89■□□□□ 0.62
SHANK1-201ENST00000293441 DHX36Q9H2U1 1008 aaKnown RBP18.89■□□□□ 0.62
SHANK1-201ENST00000293441 FOXP1Q9H334 677 aaPredicted RBP18.89■□□□□ 0.62
SHANK1-201ENST00000293441 LAD1O00515 517 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 RNF26Q9BY78 433 aaPredicted RBP18.89■□□□□ 0.61
SHANK1-201ENST00000293441 ZSCAN20P17040 1043 aaPredicted RBP18.89■□□□□ 0.61
SHANK1-201ENST00000293441 ARPP19P56211 112 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 RPS6KA2Q15349 733 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 ZBTB33Q86T24 672 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 SKA2Q8WVK7 121 aaPredicted RBP18.89■□□□□ 0.61
SHANK1-201ENST00000293441 DPH5Q9H2P9 285 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 SNX25Q9H3E2 840 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 HYOU1Q9Y4L1 999 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 UBN2Q6ZU65 1347 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 MMP10P09238 476 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 LRRC41Q15345 812 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 UBE2SQ16763 222 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 MTERF2Q49AM1 385 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 CCDC13Q8IYE1 715 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 NT5C1BQ96P26 610 aa18.89■□□□□ 0.61
SHANK1-201ENST00000293441 ERBB3P21860 1342 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 C10orf67Q8IYJ2 551 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 TTLL6Q8N841 843 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 KIF9Q9HAQ2 790 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 SETD1BQ9UPS6 1966 aaKnown RBP18.88■□□□□ 0.61
SHANK1-201ENST00000293441 MAGI2Q86UL8 1455 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 H7C0C1 242 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 CLIC2O15247 247 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 RGS16O15492 202 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-201ENST00000293441 CYP21A2P08686 494 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 ATP5OP48047 213 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 ACCSQ96QU6 501 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 RGS12O14924 1447 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 BFSP1Q12934 665 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-201ENST00000293441 JPH2Q9BR39 696 aaPredicted RBP18.88■□□□□ 0.61
SHANK1-201ENST00000293441 NR2F2P24468 414 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 NXNQ6DKJ4 435 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 RTKN2Q8IZC4 609 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 SYNMO15061 1565 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 FBXO18Q8NFZ0 1043 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 SLC10A4Q96EP9 437 aa18.88■□□□□ 0.61
SHANK1-201ENST00000293441 RNF123Q5XPI4 1314 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 PTPREP23469 700 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 MARK3P27448 753 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 CTNNA1P35221 906 aaKnown RBP18.87■□□□□ 0.61
SHANK1-201ENST00000293441 PSMC2P35998 433 aaKnown RBP18.87■□□□□ 0.61
SHANK1-201ENST00000293441 SAMD9LQ8IVG5 1584 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 WDR11Q9BZH6 1224 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 RSRC2Q7L4I2 434 aaKnown RBP18.87■□□□□ 0.61
SHANK1-201ENST00000293441 RFX6Q8HWS3 928 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 SLC17A8Q8NDX2 589 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 OSTNP61366 133 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
SHANK1-201ENST00000293441 PKP1Q13835 747 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 PPP4R1Q8TF05 950 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 COPB1P53618 953 aaKnown RBP18.87■□□□□ 0.61
SHANK1-201ENST00000293441 TSTA3Q13630 321 aaPredicted RBP18.87■□□□□ 0.61
SHANK1-201ENST00000293441 STAP2Q9UGK3 403 aa18.87■□□□□ 0.61
SHANK1-201ENST00000293441 CLASP1Q7Z460 1538 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 GAP43P17677 238 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 PRPSAP1Q14558 356 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 RYBPQ8N488 228 aaPredicted RBP18.86■□□□□ 0.61
SHANK1-201ENST00000293441 MASTLQ96GX5 879 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 MAGEF1Q9HAY2 307 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 RIPOR2Q9Y4F9 1068 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 GBP1P32455 592 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 STX2P32856 288 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 NAA35Q5VZE5 725 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 ZNF341Q9BYN7 854 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 ZNF148Q9UQR1 794 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 MESDQ14696 234 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 CCDC68Q9H2F9 335 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 H2AFZP0C0S5 128 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 TFAMQ00059 246 aaKnown RBP18.86■□□□□ 0.61
SHANK1-201ENST00000293441 NAA25Q14CX7 972 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 MUM1L1Q5H9M0 696 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 H2AFVQ71UI9 128 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 SMYD4Q8IYR2 804 aaPredicted RBP18.86■□□□□ 0.61
SHANK1-201ENST00000293441 MAD1L1Q9Y6D9 718 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 KIAA1841Q6NSI8 718 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 CACNA2D3Q8IZS8 1091 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 MAGI3Q5TCQ9 1506 aa18.86■□□□□ 0.61
SHANK1-201ENST00000293441 ATF2P15336 505 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms