RNA–Protein interactions for RNA: ENST00000280551.10

SEC24D-201, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC24D, Length 4,030 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-201ENST00000280551 DHX58Q96C10 678 aa11.46□□□□□ -0.58
SEC24D-201ENST00000280551 BIN2Q9UBW5 565 aaPredicted RBP11.46□□□□□ -0.58
SEC24D-201ENST00000280551 ZNF541Q9H0D2 1346 aa11.46□□□□□ -0.58
SEC24D-201ENST00000280551 GOLGA6L19H0YKK7 550 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 CCNT1O60563 726 aaKnown RBP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 RBM5P52756 815 aaKnown RBP eCLIP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ABCB11O95342 1321 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 PVALEFA0A1B0GWK0 134 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 EGFRP00533 1210 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 EIF6P56537 245 aaKnown RBP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 GSDMDP57764 484 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ANO3Q9BYT9 981 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 TRIM9Q9C026 710 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 VAV3Q9UKW4 847 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 SHTN1A0MZ66 631 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 TCP10L2B9ZVM9 353 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 WDR46O15213 610 aaKnown RBP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 RPN1P04843 607 aaKnown RBP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ZSCAN20P17040 1043 aaPredicted RBP11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ECE1P42892 770 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 STAT2P52630 851 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 FANCCQ00597 558 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 NIPA1Q7RTP0 329 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 TMEM139Q8IV31 216 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 GPC2Q8N158 579 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 REPS2Q8NFH8 660 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ACER1Q8TDN7 264 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 TMEM174Q8WUU8 243 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 PNMA2Q9UL42 364 aa11.45□□□□□ -0.58
SEC24D-201ENST00000280551 ATP2A1O14983 1001 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 TDP2O95551 362 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 FDX1P10109 184 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 SLC16A2P36021 539 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 FBXO11Q86XK2 927 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 PCDHA1Q9Y5I3 950 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 CALCRLQ16602 461 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 CABP7Q86V35 215 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 XPO4Q9C0E2 1151 aaKnown RBP11.44□□□□□ -0.58
SEC24D-201ENST00000280551 RABGAP1Q9Y3P9 1069 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 PCDHA2Q9Y5H9 948 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 MYH11P35749 1972 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 MPHOSPH10O00566 681 aaKnown RBP11.44□□□□□ -0.58
SEC24D-201ENST00000280551 TXLNAP40222 546 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 KARSQ15046 597 aaKnown RBP11.44□□□□□ -0.58
SEC24D-201ENST00000280551 HOMER1Q86YM7 354 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 JDP2Q8WYK2 163 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 FAM20AQ96MK3 541 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 CEP350Q5VT06 3117 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 BCRP11274 1271 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 PLCG1P19174 1290 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 GMPSP49915 693 aaPredicted RBP11.44□□□□□ -0.58
SEC24D-201ENST00000280551 TPRNQ4KMQ1 711 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
SEC24D-201ENST00000280551 CACTINQ8WUQ7 758 aaKnown RBP11.44□□□□□ -0.58
SEC24D-201ENST00000280551 ZSWIM8A7E2V4 1837 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 ZNF236Q9UL36 1845 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 CLRN2A0PK11 232 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 CBFA2T2O43439 604 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 SH3D19Q5HYK7 790 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 IRF2BP1Q8IU81 584 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 APOBEC3FQ8IUX4 373 aaKnown RBP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 CHURC1Q8WUH1 139 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 CLEC4DQ8WXI8 215 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 RAD54LQ92698 747 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 FANCLQ9NW38 375 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 CGNQ9P2M7 1197 aaKnown RBP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 ADD3Q9UEY8 706 aaKnown RBP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 NRBP1Q9UHY1 535 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 DOCK5Q9H7D0 1870 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 KDM3AQ9Y4C1 1321 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 PP2D1A8MPX8 630 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 ICAM1P05362 532 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 GTF2F1P35269 517 aaKnown RBP eCLIP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 RASA3Q14644 834 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 LETM2Q2VYF4 491 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 JAKMIP3Q5VZ66 844 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 TRIM5Q9C035 493 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 TTC12Q9H892 705 aaPredicted RBP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 GPRC5DQ9NZD1 345 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 DDX25Q9UHL0 483 aaKnown RBP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 MYPNQ86TC9 1320 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 ATP1A3P13637 1013 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 UBE2SQ16763 222 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 CCDC96Q2M329 555 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 LRRN4CLQ8ND94 238 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 SLC5A5Q92911 643 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 DNAJC19Q96DA6 116 aa11.43□□□□□ -0.58
SEC24D-201ENST00000280551 DHTKD1Q96HY7 919 aaPredicted RBP11.43□□□□□ -0.58
SEC24D-201ENST00000280551 BECN2A8MW95 431 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 TPM4P67936 248 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 PSMD2Q13200 908 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 PPP2R5CQ13362 524 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 RRAGBQ5VZM2 374 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 TTI2Q6NXR4 508 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 ARMCX5Q6P1M9 558 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 CCDC150Q8NCX0 1101 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 NLGN2Q8NFZ4 835 aa11.42□□□□□ -0.58
SEC24D-201ENST00000280551 HOOK2Q96ED9 719 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms