RNA–Protein interactions for RNA: ENST00000242776.8

DDX39A-201, Transcript of DExD-box helicase 39A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX39A, Length 1,471 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-201ENST00000242776 LCHNA4D1U4 455 aa16.28■□□□□ 0.2
DDX39A-201ENST00000242776 KIF28PB7ZC32 967 aa16.28■□□□□ 0.2
DDX39A-201ENST00000242776 ICAM1P05362 532 aa16.28■□□□□ 0.2
DDX39A-201ENST00000242776 HOXD11P31277 338 aaPredicted RBP16.28■□□□□ 0.2
DDX39A-201ENST00000242776 MORC4Q8TE76 937 aa16.28■□□□□ 0.2
DDX39A-201ENST00000242776 FSD1Q9BTV5 496 aa16.28■□□□□ 0.2
DDX39A-201ENST00000242776 TOMM22Q9NS69 142 aa16.28■□□□□ 0.2
DDX39A-201ENST00000242776 KCNJ6P48051 423 aa16.27■□□□□ 0.19
DDX39A-201ENST00000242776 PDE4DQ08499 809 aa16.27■□□□□ 0.19
DDX39A-201ENST00000242776 PPP2R5BQ15173 497 aa16.27■□□□□ 0.19
DDX39A-201ENST00000242776 ZBED2Q9BTP6 218 aa16.27■□□□□ 0.19
DDX39A-201ENST00000242776 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.19
DDX39A-201ENST00000242776 BRWD1Q9NSI6 2320 aa16.26■□□□□ 0.19
DDX39A-201ENST00000242776 PLA2G6O60733 806 aa16.26■□□□□ 0.19
DDX39A-201ENST00000242776 POU3F3P20264 500 aaPredicted RBP16.26■□□□□ 0.19
DDX39A-201ENST00000242776 RFC2P35250 354 aa16.26■□□□□ 0.19
DDX39A-201ENST00000242776 RRP12Q5JTH9 1297 aaKnown RBP16.26■□□□□ 0.19
DDX39A-201ENST00000242776 SYDE2Q5VT97 1194 aa16.26■□□□□ 0.19
DDX39A-201ENST00000242776 FAM117BQ6P1L5 589 aa16.26■□□□□ 0.19
DDX39A-201ENST00000242776 RANBP17Q9H2T7 1088 aaKnown RBP16.26■□□□□ 0.19
DDX39A-201ENST00000242776 DEFB103AP81534 67 aa16.25■□□□□ 0.19
DDX39A-201ENST00000242776 BRDTQ58F21 947 aaPredicted RBP16.25■□□□□ 0.19
DDX39A-201ENST00000242776 RNF207Q6ZRF8 634 aa16.25■□□□□ 0.19
DDX39A-201ENST00000242776 PHOSPHO2Q8TCD6 241 aa16.25■□□□□ 0.19
DDX39A-201ENST00000242776 CD320Q9NPF0 282 aa16.25■□□□□ 0.19
DDX39A-201ENST00000242776 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.25■□□□□ 0.19
DDX39A-201ENST00000242776 RAD50Q92878 1312 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 LPXNO60711 386 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 TXNP10599 105 aaKnown RBP16.24■□□□□ 0.19
DDX39A-201ENST00000242776 BFSP2Q13515 415 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 PTGISQ16647 500 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 NFRKBQ6P4R8 1299 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 CHST3Q7LGC8 479 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 OTUD7AQ8TE49 926 aaPredicted RBP16.24■□□□□ 0.19
DDX39A-201ENST00000242776 DCAF4Q8WV16 495 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 CLEC4DQ8WXI8 215 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 C11orf16Q9NQ32 467 aa16.24■□□□□ 0.19
DDX39A-201ENST00000242776 RBM47A0AV96 593 aaKnown RBP16.23■□□□□ 0.19
DDX39A-201ENST00000242776 PITPNM1O00562 1244 aa16.23■□□□□ 0.19
DDX39A-201ENST00000242776 ARIH2O95376 493 aa16.23■□□□□ 0.19
DDX39A-201ENST00000242776 WDR5P61964 334 aaKnown RBP16.23■□□□□ 0.19
DDX39A-201ENST00000242776 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
DDX39A-201ENST00000242776 PPP4R3BQ5MIZ7 849 aa16.23■□□□□ 0.19
DDX39A-201ENST00000242776 VPS53Q5VIR6 699 aa16.23■□□□□ 0.19
DDX39A-201ENST00000242776 FOXP2O15409 715 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 RPS6P62753 249 aaKnown RBP16.22■□□□□ 0.19
DDX39A-201ENST00000242776 TCTN1Q2MV58 587 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 USH1GQ495M9 461 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 ZMYM1Q5SVZ6 1142 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 GDF6Q6KF10 455 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-201ENST00000242776 SIP14410 1827 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 MYH7BA7E2Y1 1941 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 CENPQQ7L2Z9 268 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-201ENST00000242776 SCFD2Q8WU76 684 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 AFG1LQ8WV93 481 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 UIMC1Q96RL1 719 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 TMEM47Q9BQJ4 181 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 DCTPP1Q9H773 170 aa16.22■□□□□ 0.19
DDX39A-201ENST00000242776 ZBTB47Q9UFB7 747 aaPredicted RBP16.22■□□□□ 0.19
DDX39A-201ENST00000242776 A6NJR5 290 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 NKRFO15226 690 aaKnown RBP eCLIP16.21■□□□□ 0.19
DDX39A-201ENST00000242776 KPNA6O60684 536 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 BAIAP3O94812 1187 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 IGHDP01880 384 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 GPNMBQ14956 572 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 LY6KQ17RY6 165 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 B4GALNT3Q6L9W6 998 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 SEPT14Q6ZU15 432 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 LRRC8DQ7L1W4 858 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 ALYREFQ86V81 257 aaKnown RBP16.21■□□□□ 0.19
DDX39A-201ENST00000242776 MPHOSPH6Q99547 160 aaKnown RBP16.21■□□□□ 0.19
DDX39A-201ENST00000242776 ALG1Q9BT22 464 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 CPVLQ9H3G5 476 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 SUGCTQ9HAC7 445 aa16.21■□□□□ 0.19
DDX39A-201ENST00000242776 KCNA5P22460 613 aa16.2■□□□□ 0.18
DDX39A-201ENST00000242776 SSTR3P32745 418 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-201ENST00000242776 PTPN11Q06124 597 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-201ENST00000242776 CCDC155Q8N6L0 562 aa16.2■□□□□ 0.18
DDX39A-201ENST00000242776 PI4K2BQ8TCG2 481 aa16.2■□□□□ 0.18
DDX39A-201ENST00000242776 DHX38Q92620 1227 aaKnown RBP16.2■□□□□ 0.18
DDX39A-201ENST00000242776 UBE2ZQ9H832 354 aaPredicted RBP16.2■□□□□ 0.18
DDX39A-201ENST00000242776 MYH6P13533 1939 aa16.2■□□□□ 0.18
DDX39A-201ENST00000242776 KIAA1217Q5T5P2 1943 aa16.2■□□□□ 0.18
DDX39A-201ENST00000242776 SORBS3O60504 671 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 GPR37L1O60883 481 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 MMP3P08254 477 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 GOLGA8HP0CJ92 632 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 TOP1P11387 765 aaKnown RBP16.19■□□□□ 0.18
DDX39A-201ENST00000242776 SELPP16109 830 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 BTNL9Q6UXG8 535 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 SMC5Q8IY18 1101 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 AFAP1L1Q8TED9 768 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 CTAGE1Q96RT6 745 aa16.19■□□□□ 0.18
DDX39A-201ENST00000242776 NBNO60934 754 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 PDHBP11177 359 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 IL9P15248 144 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 HAND2P61296 217 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 CNKSR3Q6P9H4 555 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 EP400NLQ6ZTU2 488 aa16.18■□□□□ 0.18
DDX39A-201ENST00000242776 CAGE1Q8TC20 777 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 1252.6 ms