RNA–Protein interactions for RNA: ENST00000234420.9

MSH6-201, Transcript of mutS homolog 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSH6, Length 7,476 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-201ENST00000234420 SNX19Q92543 992 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 SYCE1LA8MT33 242 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 ZNF500O60304 480 aaPredicted RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 GAS7O60861 476 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 IRX1P78414 480 aaPredicted RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 MRPL28Q13084 256 aaKnown RBP12.05□□□□□ -0.48
MSH6-201ENST00000234420 CCPG1Q9ULG6 757 aa12.05□□□□□ -0.48
MSH6-201ENST00000234420 KDRP35968 1356 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 KLHL30Q0D2K2 578 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 WDR75Q8IWA0 830 aaKnown RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 AFG1LQ8WV93 481 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 OSBPL1AQ9BXW6 950 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 POLA1P09884 1462 aaPredicted RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 SBNO1A3KN83 1393 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 EIF3CLB5ME19 914 aaKnown RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 MYL1P05976 194 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 ATF7P17544 494 aaPredicted RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 IQCB1Q15051 598 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 XKR9Q5GH70 373 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 VMP1Q96GC9 406 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 EIF3CQ99613 913 aaKnown RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 AMFRQ9UKV5 643 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 EXOC7Q9UPT5 735 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 KRT8P05787 483 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 GYS2P54840 703 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 MFSD14BQ5SR56 506 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 GLYCTKQ8IVS8 523 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 MYL10Q9BUA6 226 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 FAM49AQ9H0Q0 323 aaPredicted RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 STAM2O75886 525 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 OLFML2BQ68BL8 750 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 TTC25Q96NG3 672 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 CFTRP13569 1480 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 SUPT3HB4E1H0 165 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 EPHB1P54762 984 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 ZNF445P59923 1031 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 UBE3AQ05086 875 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 MFSD4BQ5TF39 518 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 PHACTR3Q96KR7 559 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 SH3GL1Q99961 368 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 ESRRBO95718 433 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 TNNC2P02585 160 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 ANXA13P27216 316 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 ENOX1Q8TC92 643 aaKnown RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 COQ7Q99807 217 aa12.04□□□□□ -0.48
MSH6-201ENST00000234420 XPO4Q9C0E2 1151 aaKnown RBP12.04□□□□□ -0.48
MSH6-201ENST00000234420 DENND3A2RUS2 1198 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 NDUFB5O43674 189 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 GADD45BO75293 160 aaPredicted RBP12.03□□□□□ -0.48
MSH6-201ENST00000234420 SRGAP2CP0DJJ0 459 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 TIMM10P62072 90 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 DALRD3Q5D0E6 543 aaKnown RBP12.03□□□□□ -0.48
MSH6-201ENST00000234420 EXT2Q93063 718 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 RIC8AQ9NPQ8 531 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 RHBDL2Q9NX52 303 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 CCDC85CA6NKD9 419 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 CXorf56Q9H5V9 222 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 RSPH10B2B2RC85 870 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 TFRCP02786 760 aaKnown RBP12.03□□□□□ -0.48
MSH6-201ENST00000234420 CHGBP05060 677 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 RSPH10BP0C881 870 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 SOX5P35711 763 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 PAK1Q13153 545 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 TRAF7Q6Q0C0 670 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 TMTC2Q8N394 836 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 GSTA4O15217 222 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 A1BGP04217 495 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 ELMSAN1Q6PJG2 1045 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 SNX25Q9H3E2 840 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 ZNF277Q9NRM2 450 aaPredicted RBP12.03□□□□□ -0.48
MSH6-201ENST00000234420 ZSCAN32Q9NX65 697 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 TEKT2Q9UIF3 430 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 F5H423 210 aaPredicted RBP12.03□□□□□ -0.48
MSH6-201ENST00000234420 RRAGAQ7L523 313 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 RNF181Q9P0P0 153 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 NFE2L3Q9Y4A8 694 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 PSMD7P51665 324 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 BASP1P80723 227 aaKnown RBP12.03□□□□□ -0.48
MSH6-201ENST00000234420 NSUN2Q08J23 767 aaKnown RBP eCLIP12.03□□□□□ -0.48
MSH6-201ENST00000234420 TLK2Q86UE8 772 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 DNM3Q9UQ16 869 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 PCDHB13Q9Y5F0 798 aa12.03□□□□□ -0.48
MSH6-201ENST00000234420 SERPIND1P05546 499 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 GNAT2P19087 354 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 CERKLQ49MI3 558 aaPredicted RBP12.02□□□□□ -0.48
MSH6-201ENST00000234420 MBIPQ9NS73 344 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 H3BRJ5 948 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 EXOC3O60645 756 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 ABCB4P21439 1286 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 ART3Q13508 389 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 BRAPQ7Z569 592 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 TEX2Q8IWB9 1127 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 TRIM59Q8IWR1 403 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 TRMT44Q8IYL2 757 aaKnown RBP12.02□□□□□ -0.48
MSH6-201ENST00000234420 CCDC90BQ9GZT6 254 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 UBAP1Q9NZ09 502 aa12.02□□□□□ -0.48
MSH6-201ENST00000234420 ANGEL1Q9UNK9 670 aaKnown RBP12.02□□□□□ -0.48
MSH6-201ENST00000234420 COPG1Q9Y678 874 aaKnown RBP12.02□□□□□ -0.48
MSH6-201ENST00000234420 ARL4DP49703 201 aa12.02□□□□□ -0.49
MSH6-201ENST00000234420 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 85.1 ms