RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 GNPTABQ3T906 1256 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ATP6V1G3Q96LB4 118 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 EYA1Q99502 592 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PLEKHA4Q9H4M7 779 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 ARPP21Q9UBL0 812 aaPredicted RBP8.92□□□□□ -0.98
APOB-201ENST00000233242 GAP43P17677 238 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PDCLQ13371 301 aa8.92□□□□□ -0.98
APOB-201ENST00000233242 PYGBP11216 843 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 ACTN1P12814 892 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 PPP2R2AP63151 447 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 PDE1BQ01064 536 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 CUL4BQ13620 913 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 TTC25Q96NG3 672 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 SUFUQ9UMX1 484 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 TPTE2Q6XPS3 522 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 KRT28Q7Z3Y7 464 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 TRAIPQ9BWF2 469 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 STXBP3O00186 592 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 TIMM10P62072 90 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 GRAMD1BQ3KR37 738 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 KRT39Q6A163 491 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 NFU1Q9UMS0 254 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 MRFAP1Q9Y605 127 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 TAF5LO75529 589 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 LRRC63Q05C16 580 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 PTGDRQ13258 359 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 SLC39A6Q13433 755 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 CDC37Q16543 378 aaPredicted RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 GYG2O15488 501 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 CD19P15391 556 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 SUCLG2Q96I99 432 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 MRPL46Q9H2W6 279 aaKnown RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 NIP7Q9Y221 180 aaKnown RBP eCLIP8.91□□□□□ -0.984e-13■□□□□ 11.3
APOB-201ENST00000233242 GCC2Q8IWJ2 1684 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 GSTA1P08263 222 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 GSTA2P09210 222 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 HSPD1P10809 573 aaKnown RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 MDM2Q00987 491 aaPredicted RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 TRIML2Q8N7C3 387 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 SYT2Q8N9I0 419 aaPredicted RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 CARD10Q9BWT7 1032 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 USP44Q9H0E7 712 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 MAN1B1Q9UKM7 699 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 ZNF532Q9HCE3 1301 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 PPP4R3CPQ6ZMV5 832 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 TRIM50Q86XT4 487 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 COG1Q8WTW3 980 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 IP6K1Q92551 441 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 NDE1Q9NXR1 346 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 IQANK1A0A1B0GTG1 560 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 MIF4GDA9UHW6 222 aaKnown RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 MEFVO15553 781 aaPredicted RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 MCF2P10911 925 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 ITGA6P23229 1130 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 SCYL1Q96KG9 808 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 DENND4BO75064 1496 aaPredicted RBP8.91□□□□□ -0.98
APOB-201ENST00000233242 ZNF521Q96K83 1311 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 FOXP2O15409 715 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 CHMP2AO43633 222 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 ELF1P32519 619 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 PPARDQ03181 441 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 ARHGEF10LQ9HCE6 1279 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 ARHGEF9O43307 516 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 RFC4P35249 363 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 CEP70Q8NHQ1 597 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 MYL10Q9BUA6 226 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 MFAP3P55082 362 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 LRRC37BQ96QE4 947 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 DMRT2Q9Y5R5 561 aa8.91□□□□□ -0.98
APOB-201ENST00000233242 CTTNBP2Q8WZ74 1663 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 ABCD1P33897 745 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 SLC1A4P43007 532 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 ART3Q13508 389 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 PCDH11XQ9BZA7 1347 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 PCDH11YQ9BZA8 1340 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 TRPA1O75762 1119 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 KCNA4P22459 653 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 CUL3Q13618 768 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 RSPH3Q86UC2 560 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 NSUN7Q8NE18 718 aaKnown RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 STAMQ92783 540 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 RNF34Q969K3 372 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 CHMP6Q96FZ7 201 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 ZBTB12Q9Y330 459 aaPredicted RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 SYCP2Q9BX26 1530 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 VPS41P49754 854 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 AP2B1P63010 937 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 CDR2Q01850 454 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 ZKSCAN7Q9P0L1 754 aaPredicted RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 hCG_1984214I3L0E3 225 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 RWDD2BP57060 319 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 SNX1Q13596 522 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 ANO5Q75V66 913 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 ZNF713Q8N859 430 aaPredicted RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 YTHDC2Q9H6S0 1430 aaKnown RBP8.9□□□□□ -0.98
APOB-201ENST00000233242 PZPP20742 1482 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 FSCBQ5H9T9 825 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 NUGGCQ68CJ6 796 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 C3orf20Q8ND61 904 aa8.9□□□□□ -0.98
APOB-201ENST00000233242 YIPF3Q9GZM5 350 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms