RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 ACTN1P12814 892 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 OSTNP61366 133 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 MESDQ14696 234 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 EXOC3L4Q17RC7 722 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ADALQ6DHV7 355 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 C7orf31Q8N865 590 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 OR8K1Q8NGG5 319 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ZBED2Q9BTP6 218 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ZMYM4Q5VZL5 1548 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 MARK3P27448 753 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ASPRV1Q53RT3 343 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 NAA35Q5VZE5 725 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 SLC7A3Q8WY07 619 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ADCY9O60503 1353 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 PSDA5PKW4 1024 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 INPP1P49441 399 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 PTH1RQ03431 593 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 MIGA2Q7L4E1 593 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ACCSQ96QU6 501 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 JPH2Q9BR39 696 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 GTPBP6O43824 516 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 OAS2P29728 719 aaKnown RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 SLC17A8Q8NDX2 589 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 RNF217Q8TC41 542 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 DESI2Q9BSY9 194 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 RASSF4Q9H2L5 321 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 SLC8A2Q9UPR5 921 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 LEMD3Q9Y2U8 911 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 MGEA5O60502 916 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 FOSP01100 380 aaPredicted RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ADORA1P30542 326 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ADD1P35611 737 aaKnown RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 IREB2P48200 963 aaKnown RBP14.42□□□□□ -0.1
COL1A1-201ENST00000225964 FAM182BQ5T319 152 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 NACC1Q96RE7 527 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 ATP7AQ04656 1500 aa14.42□□□□□ -0.1
COL1A1-201ENST00000225964 M0R2C6 588 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 NVLO15381 856 aaKnown RBP14.41□□□□□ -0.1
COL1A1-201ENST00000225964 BNIP3LO60238 219 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 ELF1P32519 619 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 STAT2P52630 851 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 PTGDRQ13258 359 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 FAM196AQ6ZSG2 479 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 POC1B-GALNT4F8VUJ3 575 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 SEMA3EO15041 775 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 KRT10P13645 584 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 PHKA1P46020 1223 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 DYNLL1P63167 89 aaKnown RBP14.41□□□□□ -0.1
COL1A1-201ENST00000225964 MUM1Q2TAK8 710 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 MTERF2Q49AM1 385 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 EXOC8Q8IYI6 725 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 LONP1P36776 959 aaKnown RBP14.41□□□□□ -0.1
COL1A1-201ENST00000225964 IRX4P78413 519 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 TFAMQ00059 246 aaKnown RBP14.41□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF827Q17R98 1081 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 FAM26FQ5R3K3 315 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 FIS1Q9Y3D6 152 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 GDAP1Q8TB36 358 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF653Q96CK0 615 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 SPDL1Q96EA4 605 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 KLHL14Q9P2G3 628 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 ZNF233A6NK53 670 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 ARHGAP25P42331 645 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 PTPRKQ15262 1439 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 DALRD3Q5D0E6 543 aaKnown RBP14.41□□□□□ -0.1
COL1A1-201ENST00000225964 TSC1Q92574 1164 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 CEP170P1Q96L14 293 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 TTC1Q99614 292 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 ATP10DQ9P241 1426 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 FAM8A1Q9UBU6 413 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 PALD1Q9ULE6 856 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 YEATS2Q9ULM3 1422 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 POLIQ9UNA4 740 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 GOLGA8SH3BPF8 625 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 INHBAP08476 426 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 HP1BP3Q5SSJ5 553 aaPredicted RBP14.41□□□□□ -0.1
COL1A1-201ENST00000225964 PCDHA4Q9UN74 947 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 CLIC4Q9Y696 253 aa14.41□□□□□ -0.1
COL1A1-201ENST00000225964 CACNB1Q02641 598 aaPredicted RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 SNX1Q13596 522 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 ALKBH8Q96BT7 664 aaKnown RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 FMNL1O95466 1100 aaPredicted RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 FGAP02671 866 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 PSMC2P35998 433 aaKnown RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 PDE1BQ01064 536 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 CNOT6LQ96LI5 555 aaKnown RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 TACO1Q9BSH4 297 aaKnown RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 FTOQ9C0B1 505 aaKnown RBP eCLIP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 RIPOR2Q9Y4F9 1068 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 MEIS1O00470 390 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 SMIM24O75264 130 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 DYNLT1P63172 113 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 THOC5Q13769 683 aaKnown RBP14.4□□□□□ -0.1
COL1A1-201ENST00000225964 SYDE2Q5VT97 1194 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 ELMSAN1Q6PJG2 1045 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 BBOF1Q8ND07 529 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 CFAP43Q8NDM7 1665 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 BPIFB4P59827 614 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 CCDC38Q502W7 563 aa14.4□□□□□ -0.1
COL1A1-201ENST00000225964 TESK2Q96S53 571 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms