RNA–Protein interactions for RNA: ENSMUST00000210774.1

Ebf3-208, Transcript of Transcription factor COE3, mousemouse

TSL 1 (best) BASIC

Gene Ebf3, Length 2,994 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3-208ENSMUST00000210774 Srrm3Q80WV7 648 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Asic2Q925H0 512 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 CluhQ5SW19 1315 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ap1m1P35585 423 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Hcls1P49710 486 aaKnown RBP16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ano9P86044 747 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Igf2bp2Q5SF07 592 aaKnown RBP16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Fkbp5Q64378 456 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Rtn1Q8K0T0 780 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Stap2Q8R0L1 411 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 CutaQ9CQ89 177 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Arl2bpQ9D385 163 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ndst4Q9EQW8 872 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Abhd2Q9QXM0 425 aa16.22■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Apol7aB2RT54 418 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Zfp105G3X9I0 524 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Pde4dQ01063 747 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Kiaa1468Q148V7 1216 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ttc19Q8CC21 365 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Sirt2Q8VDQ8 389 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ndufb9Q9CQJ8 179 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Scgb2b12S4R2L0 112 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ptprn2P80560 1001 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Iqsec3Q3TES0 1195 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Krt12Q64291 487 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 TwistnbQ78WZ7 330 aaKnown RBP16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Wasf2Q8BH43 497 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Miga2Q8BK03 593 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Armcx6Q8K3A6 301 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Emilin1Q99K41 1017 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Ccdc130Q9D516 385 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Znf654Q9DAU9 571 aa16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Noa1Q9JJG9 693 aaKnown RBP16.21■□□□□ 0.19
Ebf3-208ENSMUST00000210774 Gm5934D3Z4U6 212 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Actn4P57780 912 aaKnown RBP16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 ClasrpQ8CFC7 668 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Igf2bp3Q9CPN8 579 aaKnown RBP16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Mtfr1lQ9CWE0 289 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Itga9B8JK39 1036 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cyp3a59D3Z2W7 503 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Trove2O08848 538 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 P4hbP09103 509 aaKnown RBP16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Plekhf1Q3TB82 279 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Oxr1Q4KMM3 866 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Gramd4Q8CB44 633 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Sugp1Q8CH02 643 aaKnown RBP16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 P3h4Q8K2B0 443 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ncoa5Q91W39 579 aaKnown RBP16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 AslQ91YI0 464 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Eaf2Q91ZD6 262 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rnf34Q99KR6 376 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rdm1Q9CQK3 281 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 ArpinQ9D0A3 226 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 2310002L09RikQ9D7L5 217 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Nphs1Q9QZS7 1256 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Atp6v1g2Q9WTT4 118 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Stk39Q9Z1W9 556 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tnks1bp1P58871 1720 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cyb5rlB1AS42 316 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ddx23D3Z0M9 819 aaKnown RBP16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 PltpP55065 493 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Fhdc1Q3ULZ2 1149 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Slc27a1Q60714 646 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cep131Q62036 1060 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Edrf1Q6GQV7 1239 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 NostrinQ6WKZ7 506 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 4930572O03RikQ8C5Y0 211 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Caap1Q8VDY9 356 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Gucy1a3Q9ERL9 691 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cyth1Q9QX11 398 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Coro1cQ9WUM4 474 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Psma7Q9Z2U0 248 aa16.2■□□□□ 0.18
Ebf3-208ENSMUST00000210774 PfasQ5SUR0 1337 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Trappc11B2RXC1 1133 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Anxa1P10107 346 aaKnown RBP16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 SfswapQ3USH5 945 aaKnown RBP16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Gnat3Q3V3I2 354 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ccnl1Q52KE7 532 aaKnown RBP16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 RragaQ80X95 313 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cyp26b1Q811W2 512 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Acbd3Q8BMP6 525 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cadps2Q8BYR5 1297 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Inpp5fQ8CDA1 1132 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rbm28Q8CGC6 750 aaKnown RBP16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 IntS13Q8QZV7 732 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Tex19.1Q99MV2 351 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cxcr2P35343 359 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Oprl1P35377 367 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Foxp1P58462 705 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Nlrp1aQ2LKU9 1182 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Nhej1Q3KNJ2 295 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Arhgef2Q60875 985 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Mapk6Q61532 720 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Ints5Q8CHT3 1018 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Eva1bQ8K2Y3 164 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 C1qtnf12Q8R2Z0 308 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Pcdhb22Q91XZ8 794 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Golga1Q9CW79 758 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Cap2Q9CYT6 476 aa16.19■□□□□ 0.18
Ebf3-208ENSMUST00000210774 Rexo2Q9D8S4 237 aa16.19■□□□□ 0.18
Retrieved 100 of 22,080 RNA–protein pairs in 12.8 ms