RNA–Protein interactions for RNA: ENSMUST00000019649.3

Ubb-201, Transcript of Polyubiquitin-B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ubb, Length 1,499 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubb-201ENSMUST00000019649 Atp6v1dP57746 247 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Kcna2P63141 499 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 B230104I21RikQ3USW4 141 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Samhd1Q60710 627 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Nxf7Q80SZ6 620 aaKnown RBP18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rusc1Q8BG26 893 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Bhmt2Q91WS4 363 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rassf3Q99P51 232 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ftsj3Q9DBE9 838 aaKnown RBP18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Dclk1Q9JLM8 756 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ubxn8Q9QZ49 277 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 Plod3Q9R0E1 741 aa18.22■□□□□ 0.51
Ubb-201ENSMUST00000019649 AunipE9Q6Z5 340 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Mt-CybP00158 381 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Nr5a1P33242 462 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Stat1P42225 749 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ctdnep1Q3TP92 244 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Rsph3aQ3UFY4 516 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Lrrc14bQ3UJB3 510 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Cdkl5Q3UTQ8 938 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Esyt3Q5DTI8 891 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Etaa1Q5SVT3 877 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Ttc7aQ8BGB2 858 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Hdhd5Q91WM2 419 aa18.21■□□□□ 0.51
Ubb-201ENSMUST00000019649 Pgap3A2A559 320 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Tlk2O55047 718 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Atg4cQ811C2 458 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Kctd3Q8BFX3 815 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 NkrfQ8BY02 690 aaKnown RBP18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Plcd1Q8R3B1 756 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Fgd4Q91ZT5 766 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Npm3Q9CPP0 175 aaKnown RBP18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Q9DAQ4 598 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 TroapB7ZNG4 668 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Zc3h7bF8VPP8 982 aaKnown RBP18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Ppfia3P60469 1194 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Skiv2lQ6NZR5 1244 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Slitrk3Q810B9 980 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Lrrc2Q8VDB8 371 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Chmp4cQ9D7F7 232 aa18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Alg13Q9D8C3 1166 aaKnown RBP18.2■□□□□ 0.5
Ubb-201ENSMUST00000019649 Gucy1a2F8VQK3 730 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Stra6O70491 670 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Taf1bP97358 586 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Col19a1Q0VF58 1136 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Xxylt1Q3U4G3 392 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Mars2Q499X9 586 aaKnown RBP18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Zfp943Q6NZP4 507 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Ece2Q80Z60 881 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 Q8C5S3 137 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 GldcQ91W43 1025 aa18.19■□□□□ 0.5
Ubb-201ENSMUST00000019649 AV320801A2AWL3 467 aa18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Gm15023L7MUB4 467 aa18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Itgb5O70309 798 aa18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 FosP01101 380 aa18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Fam189a2Q4FZH1 290 aa18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Igf2bp2Q5SF07 592 aaKnown RBP18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Ddx19aQ61655 478 aaKnown RBP18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Vmn1r191Q8K4D0 298 aa18.18■□□□□ 0.5
Ubb-201ENSMUST00000019649 Col5a3Q9JLI2 1739 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Gm4758L7N258 96 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Gna11P21278 359 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 GlrbP48168 496 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Phlda1Q62392 405 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Dnaaf2Q8BPI1 814 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Bud13Q8R149 637 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Scnn1bQ9WU38 638 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Sbno2Q7TNB8 1349 aa18.17■□□□□ 0.5
Ubb-201ENSMUST00000019649 Dnajc25A2ALW5 357 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Pramef17A2ASJ1 475 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Zbtb21E9Q444 1094 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Gm20503G3UZK1 150 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Phka1P18826 1241 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Trap1aP19473 224 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Fscn1Q61553 493 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Dlg1Q811D0 905 aaKnown RBP18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Iffo2Q8R2V2 512 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Ca9Q8VHB5 437 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 AclyQ91V92 1091 aaKnown RBP18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Ddx41Q91VN6 622 aaKnown RBP18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Bicd2Q921C5 820 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Ddx50Q99MJ9 734 aaKnown RBP18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Cntnap5cQ0V8T7 1305 aa18.16■□□□□ 0.5
Ubb-201ENSMUST00000019649 Zkscan1Q8BGS3 561 aaKnown RBP18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Wbp1lQ8BGW2 348 aa18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Prr11Q8BHE0 368 aa18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Crlf2Q8CII9 359 aa18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Adgrg2Q8CJ12 1009 aa18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Kbtbd4Q8R179 534 aa18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Pkp2Q9CQ73 795 aaKnown RBP18.15■□□□□ 0.5
Ubb-201ENSMUST00000019649 Olfr67F8VPJ8 320 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Cops5O35864 334 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Tdo2P48776 406 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Tp53i13Q5F267 385 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Slc27a1Q60714 646 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 F11Q91Y47 624 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Tekt1Q9DAJ2 418 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Cdc42ep5Q9Z0X0 150 aa18.14■□□□□ 0.5
Ubb-201ENSMUST00000019649 Wdr81Q5ND34 1934 aa18.14■□□□□ 0.49
Ubb-201ENSMUST00000019649 Nme9A0A1L1SUL6 329 aa18.14■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 27.6 ms