RNA–Protein interactions for RNA: YPR132W

RPS23B, Transcript of Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit, yeast

Gene RPS23B, Length 438 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPS23B	YPR132W	SOL3	P38858	249 aa		4.29	□□□□□ -1.72
RPS23B	YPR132W	STM1	P39015	273 aa	Known RBP	4.29	□□□□□ -1.72
RPS23B	YPR132W	YAP5	P40574	245 aa		4.29	□□□□□ -1.72
RPS23B	YPR132W	LAM6	Q08001	693 aa		4.29	□□□□□ -1.72
RPS23B	YPR132W	YJR008W	P47085	338 aa		4.28	□□□□□ -1.72
RPS23B	YPR132W	RIM21	P48565	533 aa		4.28	□□□□□ -1.72
RPS23B	YPR132W	MRX10	Q05648	414 aa		4.28	□□□□□ -1.72
RPS23B	YPR132W	GIN4	Q12263	1142 aa		4.28	□□□□□ -1.72
RPS23B	YPR132W	GYP5	Q12344	894 aa		4.28	□□□□□ -1.72
RPS23B	YPR132W	YBL113C	Q7M4S9	792 aa		4.28	□□□□□ -1.72
RPS23B	YPR132W	SEC20	P28791	383 aa		4.27	□□□□□ -1.73
RPS23B	YPR132W	KTR7	P40504	517 aa		4.27	□□□□□ -1.73
RPS23B	YPR132W	ALD2	P47771	506 aa		4.27	□□□□□ -1.73
RPS23B	YPR132W	ECM23	Q02710	187 aa		4.27	□□□□□ -1.73
RPS23B	YPR132W	OCA5	P38738	679 aa		4.26	□□□□□ -1.73
RPS23B	YPR132W	OSW7	P43611	510 aa		4.26	□□□□□ -1.73
RPS23B	YPR132W	YAF9	P53930	226 aa		4.26	□□□□□ -1.73
RPS23B	YPR132W	YPR109W	Q06104	294 aa		4.26	□□□□□ -1.73
RPS23B	YPR132W	MAK16	P10962	306 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS23B	YPR132W	MNN4	P36044	1178 aa		4.25	□□□□□ -1.73
RPS23B	YPR132W	DCW1	P36091	449 aa		4.25	□□□□□ -1.73
RPS23B	YPR132W	MDG1	P53885	366 aa		4.25	□□□□□ -1.73
RPS23B	YPR132W	FPR4	Q06205	392 aa	Predicted RBP	4.25	□□□□□ -1.73
RPS23B	YPR132W	RPP1B	P10622	106 aa	Known RBP	4.24	□□□□□ -1.73
RPS23B	YPR132W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
RPS23B	YPR132W	UBX7	P38349	436 aa		4.24	□□□□□ -1.73
RPS23B	YPR132W	ERP5	P38819	212 aa		4.24	□□□□□ -1.73
RPS23B	YPR132W	YPP1	P46951	817 aa		4.24	□□□□□ -1.73
RPS23B	YPR132W	KAR5	Q04746	504 aa		4.24	□□□□□ -1.73
RPS23B	YPR132W	CSC1	Q06538	782 aa		4.24	□□□□□ -1.73
RPS23B	YPR132W	SAM3	Q08986	587 aa		4.24	□□□□□ -1.73
RPS23B	YPR132W	GAP1	P19145	602 aa	Predicted RBP	4.23	□□□□□ -1.73
RPS23B	YPR132W	SLY41	P22215	453 aa		4.23	□□□□□ -1.73
RPS23B	YPR132W	NMD2	P38798	1089 aa	Known RBP	4.23	□□□□□ -1.73
RPS23B	YPR132W	ILV3	P39522	585 aa	Known RBP	4.23	□□□□□ -1.73
RPS23B	YPR132W	ALD4	P46367	519 aa	Known RBP	4.23	□□□□□ -1.73
RPS23B	YPR132W	POL32	P47110	350 aa		4.23	□□□□□ -1.73
RPS23B	YPR132W	TPO2	P53283	614 aa		4.23	□□□□□ -1.73
RPS23B	YPR132W	MSC6	Q08818	692 aa	Known RBP	4.23	□□□□□ -1.73
RPS23B	YPR132W	SIT4	P20604	311 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	PEP12	P32854	288 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	GRS1	P38088	690 aa	Known RBP	4.22	□□□□□ -1.73
RPS23B	YPR132W	YHL050C	P38721	697 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	YHR219W	P38900	624 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.22	□□□□□ -1.73	not detected
RPS23B	YPR132W	THI12	P42883	340 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	THI5	P43534	340 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	NNF1	P47149	201 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	THI11	P47183	340 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	PEX21	P50091	288 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	NST1	P53935	1240 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	THI13	Q07748	340 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	YEL077C	Q3E7X8	1277 aa		4.22	□□□□□ -1.73
RPS23B	YPR132W	AI4	P03878	556 aa		4.21	□□□□□ -1.74
RPS23B	YPR132W	MPH3	P0CE00	602 aa		4.21	□□□□□ -1.74
RPS23B	YPR132W	YGL015C	P33199	130 aa		4.21	□□□□□ -1.74
RPS23B	YPR132W	RSC30	P38781	883 aa		4.21	□□□□□ -1.74
RPS23B	YPR132W	TIF4632	P39936	914 aa	Known RBP	4.21	□□□□□ -1.74
RPS23B	YPR132W	BUD21	Q08492	214 aa	Predicted RBP	4.21	□□□□□ -1.74
RPS23B	YPR132W	MCM16	Q12262	181 aa		4.21	□□□□□ -1.74
RPS23B	YPR132W	GAL2	P13181	574 aa		4.2	□□□□□ -1.74
RPS23B	YPR132W	ATE1	P16639	503 aa		4.2	□□□□□ -1.74
RPS23B	YPR132W	RDS2	P19541	446 aa	Known RBP	4.2	□□□□□ -1.74
RPS23B	YPR132W	ISF1	P32488	338 aa		4.2	□□□□□ -1.74
RPS23B	YPR132W	SLI15	P38283	698 aa		4.2	□□□□□ -1.74
RPS23B	YPR132W	TPS3	P38426	1054 aa	Known RBP	4.2	□□□□□ -1.74
RPS23B	YPR132W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
RPS23B	YPR132W	RRP15	Q06511	250 aa	Predicted RBP	4.2	□□□□□ -1.74
RPS23B	YPR132W	ENV9	Q08651	330 aa		4.2	□□□□□ -1.74
RPS23B	YPR132W	TFB4	Q12004	338 aa		4.2	□□□□□ -1.74
RPS23B	YPR132W	PDR1	P12383	1068 aa		4.19	□□□□□ -1.74
RPS23B	YPR132W	TRM1	P15565	570 aa	Known RBP	4.19	□□□□□ -1.74
RPS23B	YPR132W	TOM20	P35180	183 aa		4.19	□□□□□ -1.74
RPS23B	YPR132W	GTT3	P39996	337 aa		4.19	□□□□□ -1.74
RPS23B	YPR132W	NAF1	P53919	492 aa	Known RBP	4.19	□□□□□ -1.74
RPS23B	YPR132W	OYE2	Q03558	400 aa	Known RBP	4.19	□□□□□ -1.74
RPS23B	YPR132W	UBX5	Q06682	500 aa		4.19	□□□□□ -1.74
RPS23B	YPR132W	CDC73	Q06697	393 aa		4.19	□□□□□ -1.74
RPS23B	YPR132W	TUM1	Q08686	304 aa	Known RBP	4.19	□□□□□ -1.74
RPS23B	YPR132W	HTA1	P04911	132 aa	Known RBP	4.18	□□□□□ -1.74
RPS23B	YPR132W	HTA2	P04912	132 aa		4.18	□□□□□ -1.74
RPS23B	YPR132W	PPX1	P38698	397 aa		4.18	□□□□□ -1.74
RPS23B	YPR132W	CST6	P40535	587 aa		4.18	□□□□□ -1.74
RPS23B	YPR132W	KRI1	P42846	591 aa	Known RBP	4.18	□□□□□ -1.74
RPS23B	YPR132W	SVF1	Q05515	481 aa		4.18	□□□□□ -1.74
RPS23B	YPR132W	JIP5	Q06214	492 aa	Predicted RBP	4.18	□□□□□ -1.74
RPS23B	YPR132W	WHI5	Q12416	295 aa		4.18	□□□□□ -1.74
RPS23B	YPR132W	TRL1	P09880	827 aa	Known RBP	4.17	□□□□□ -1.74
RPS23B	YPR132W	SEC8	P32855	1065 aa		4.17	□□□□□ -1.74
RPS23B	YPR132W	RRP14	P36080	434 aa	Known RBP	4.17	□□□□□ -1.74
RPS23B	YPR132W	MDJ2	P42834	146 aa		4.17	□□□□□ -1.74
RPS23B	YPR132W	SET4	P42948	560 aa		4.17	□□□□□ -1.74
RPS23B	YPR132W	EMP47	P43555	445 aa		4.17	□□□□□ -1.74
RPS23B	YPR132W	RNH70	P53331	553 aa		4.17	□□□□□ -1.74
RPS23B	YPR132W	YNL115C	P53925	644 aa		4.17	□□□□□ -1.74
RPS23B	YPR132W	MGE1	P38523	228 aa		4.16	□□□□□ -1.74
RPS23B	YPR132W	TBF1	Q02457	562 aa		4.16	□□□□□ -1.74
RPS23B	YPR132W	CWC15	Q03772	175 aa	Known RBP	4.16	□□□□□ -1.74
RPS23B	YPR132W	YOL036W	Q08206	761 aa		4.16	□□□□□ -1.74
RPS23B	YPR132W	PPG1	P32838	368 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 66 ms