RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	IPL1	P38991	367 aa		4.6	□□□□□ -1.67
APL4	YPR029C	TLG1	Q03322	224 aa		4.6	□□□□□ -1.67
APL4	YPR029C	COG4	Q06096	861 aa		4.6	□□□□□ -1.67
APL4	YPR029C	TIF1	P10081	395 aa	Known RBP	4.58	□□□□□ -1.68
APL4	YPR029C	DAL5	P15365	543 aa		4.58	□□□□□ -1.68
APL4	YPR029C	DPB3	P27344	201 aa		4.58	□□□□□ -1.68
APL4	YPR029C	SRP40	P32583	406 aa	Predicted RBP	4.58	□□□□□ -1.68
APL4	YPR029C	ALG12	P53730	551 aa		4.58	□□□□□ -1.68
APL4	YPR029C	OYE2	Q03558	400 aa	Known RBP	4.58	□□□□□ -1.68
APL4	YPR029C	ENT2	Q05785	613 aa		4.58	□□□□□ -1.68
APL4	YPR029C	ERP4	Q12450	207 aa		4.58	□□□□□ -1.68
APL4	YPR029C	DNM1	P54861	757 aa		4.57	□□□□□ -1.68
APL4	YPR029C	PWP2	P25635	923 aa	Known RBP	4.56	□□□□□ -1.68
APL4	YPR029C	GRX7	P38068	203 aa		4.56	□□□□□ -1.68
APL4	YPR029C	REF2	P42073	533 aa	Predicted RBP	4.56	□□□□□ -1.68
APL4	YPR029C	YPR204W	Q08995	1032 aa		4.56	□□□□□ -1.68
APL4	YPR029C	ERG12	P07277	443 aa		4.56	□□□□□ -1.68
APL4	YPR029C	OPI1	P21957	404 aa		4.56	□□□□□ -1.68
APL4	YPR029C	RPN12	P32496	274 aa		4.56	□□□□□ -1.68
APL4	YPR029C	YKL091C	P33324	310 aa	Known RBP	4.56	□□□□□ -1.68
APL4	YPR029C	RRP15	Q06511	250 aa	Predicted RBP	4.56	□□□□□ -1.68
APL4	YPR029C	PSK2	Q08217	1101 aa		4.56	□□□□□ -1.68
APL4	YPR029C	CIT2	P08679	460 aa		4.55	□□□□□ -1.68
APL4	YPR029C	BIO2	P32451	375 aa		4.55	□□□□□ -1.68
APL4	YPR029C	GRX4	P32642	244 aa		4.55	□□□□□ -1.68
APL4	YPR029C	POL32	P47110	350 aa		4.55	□□□□□ -1.68
APL4	YPR029C	PSD2	P53037	1138 aa	Known RBP	4.55	□□□□□ -1.68
APL4	YPR029C	VMS1	Q04311	632 aa	Known RBP	4.55	□□□□□ -1.68
APL4	YPR029C	NSE3	Q05541	303 aa		4.55	□□□□□ -1.68
APL4	YPR029C	JIP5	Q06214	492 aa	Predicted RBP	4.55	□□□□□ -1.68
APL4	YPR029C	SSF2	Q12153	453 aa	Predicted RBP	4.55	□□□□□ -1.68
APL4	YPR029C	VPS24	P36095	224 aa	Known RBP	4.55	□□□□□ -1.68
APL4	YPR029C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
APL4	YPR029C	MSC6	Q08818	692 aa	Known RBP	4.55	□□□□□ -1.68
APL4	YPR029C	PLP2	Q12017	286 aa		4.55	□□□□□ -1.68
APL4	YPR029C	YGR161W-C	Q3E744	92 aa		4.55	□□□□□ -1.68
APL4	YPR029C	TY4B-P	A0A0B7P3V8	1104 aa		4.54	□□□□□ -1.68
APL4	YPR029C	TY4A-H	Q6Q5P6	413 aa		4.54	□□□□□ -1.68
APL4	YPR029C	SEC6	P32844	805 aa		4.54	□□□□□ -1.68
APL4	YPR029C	TIF4632	P39936	914 aa	Known RBP	4.54	□□□□□ -1.68
APL4	YPR029C	CSN12	P47130	423 aa		4.54	□□□□□ -1.68
APL4	YPR029C	SYH1	Q02875	849 aa	Known RBP	4.54	□□□□□ -1.68
APL4	YPR029C	RTG2	P32608	588 aa	Known RBP	4.53	□□□□□ -1.68
APL4	YPR029C	HSP82	P02829	709 aa	Known RBP	4.53	□□□□□ -1.68
APL4	YPR029C	PRI1	P10363	409 aa		4.53	□□□□□ -1.68
APL4	YPR029C	HSC82	P15108	705 aa	Known RBP	4.53	□□□□□ -1.68
APL4	YPR029C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
APL4	YPR029C	RTT106	P40161	455 aa		4.53	□□□□□ -1.68
APL4	YPR029C	YBL113C	Q7M4S9	792 aa		4.53	□□□□□ -1.68
APL4	YPR029C	MAG2	Q06436	670 aa	Known RBP	4.52	□□□□□ -1.69
APL4	YPR029C	PUS1	Q12211	544 aa	Known RBP	4.52	□□□□□ -1.69
APL4	YPR029C	THS1	P04801	734 aa	Known RBP	4.52	□□□□□ -1.69
APL4	YPR029C	TRX2	P22803	104 aa	Known RBP	4.52	□□□□□ -1.69
APL4	YPR029C	NFU1	P32860	256 aa		4.52	□□□□□ -1.69
APL4	YPR029C	YML083C	Q04526	418 aa		4.52	□□□□□ -1.69
APL4	YPR029C	PUP1	P25043	261 aa		4.51	□□□□□ -1.69
APL4	YPR029C	FUI1	P38196	639 aa		4.51	□□□□□ -1.69
APL4	YPR029C	YBL036C	P38197	257 aa		4.51	□□□□□ -1.69
APL4	YPR029C	YJL049W	P47048	450 aa		4.51	□□□□□ -1.69
APL4	YPR029C	UTP14	Q04500	899 aa	Known RBP	4.51	□□□□□ -1.69
APL4	YPR029C	ATE1	P16639	503 aa		4.51	□□□□□ -1.69
APL4	YPR029C	TFC3	P34111	1160 aa		4.51	□□□□□ -1.69
APL4	YPR029C	MUM2	P38236	366 aa		4.51	□□□□□ -1.69
APL4	YPR029C	NMD3	P38861	518 aa	Known RBP	4.51	□□□□□ -1.69
APL4	YPR029C	SEC8	P32855	1065 aa		4.5	□□□□□ -1.69
APL4	YPR029C	MAL31	P38156	614 aa		4.5	□□□□□ -1.69
APL4	YPR029C	VAC8	P39968	578 aa		4.5	□□□□□ -1.69
APL4	YPR029C	IOC3	P43596	787 aa		4.5	□□□□□ -1.69
APL4	YPR029C	COX6	P00427	148 aa		4.5	□□□□□ -1.69
APL4	YPR029C	MAK11	P20484	414 aa	Known RBP	4.5	□□□□□ -1.69
APL4	YPR029C	MDM1	Q01846	1127 aa		4.5	□□□□□ -1.69
APL4	YPR029C	RPN4	Q03465	531 aa		4.5	□□□□□ -1.69
APL4	YPR029C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.49	□□□□□ -1.69	not detected
APL4	YPR029C	SWI3	P32591	825 aa		4.49	□□□□□ -1.69
APL4	YPR029C	PPX1	P38698	397 aa		4.49	□□□□□ -1.69
APL4	YPR029C	MNN1	P39106	762 aa		4.49	□□□□□ -1.69
APL4	YPR029C	ITC1	P53125	1264 aa		4.49	□□□□□ -1.69
APL4	YPR029C	IMH1	Q06704	911 aa	Known RBP	4.49	□□□□□ -1.69
APL4	YPR029C	SNU66	Q12420	587 aa	Predicted RBP	4.49	□□□□□ -1.69
APL4	YPR029C	ENP1	P38333	483 aa	Known RBP	4.49	□□□□□ -1.69
APL4	YPR029C	MGE1	P38523	228 aa		4.49	□□□□□ -1.69
APL4	YPR029C	ERP5	P38819	212 aa		4.49	□□□□□ -1.69
APL4	YPR029C	YOR131C	Q12486	218 aa		4.49	□□□□□ -1.69
APL4	YPR029C	UBP12	P39538	1254 aa		4.48	□□□□□ -1.69
APL4	YPR029C	FAF1	P40546	346 aa	Predicted RBP	4.48	□□□□□ -1.69
APL4	YPR029C	DPS1	P04802	557 aa	Known RBP	4.48	□□□□□ -1.69
APL4	YPR029C	MET1	P36150	593 aa		4.48	□□□□□ -1.69
APL4	YPR029C	YHL050C	P38721	697 aa		4.48	□□□□□ -1.69
APL4	YPR029C	YHR219W	P38900	624 aa		4.48	□□□□□ -1.69
APL4	YPR029C	MSH4	P40965	878 aa	Predicted RBP	4.48	□□□□□ -1.69
APL4	YPR029C	YJR142W	P47173	342 aa		4.48	□□□□□ -1.69
APL4	YPR029C	YEL077C	Q3E7X8	1277 aa		4.48	□□□□□ -1.69
APL4	YPR029C	ALD3	P54114	506 aa		4.47	□□□□□ -1.69
APL4	YPR029C	SVL3	Q03088	825 aa	Known RBP	4.47	□□□□□ -1.69
APL4	YPR029C	PKH1	Q03407	766 aa		4.47	□□□□□ -1.69
APL4	YPR029C	STB3	Q12427	513 aa		4.47	□□□□□ -1.69
APL4	YPR029C	QCR6	P00127	147 aa		4.47	□□□□□ -1.69
APL4	YPR029C	MRC1	P25588	1096 aa		4.47	□□□□□ -1.69
APL4	YPR029C	THI12	P42883	340 aa		4.47	□□□□□ -1.69
APL4	YPR029C	THI5	P43534	340 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 64.6 ms