RNA–Protein interactions for RNA: YGR004W

PEX31, Transcript of Peroxisomal integral membrane protein, yeastyeast

Gene PEX31, Length 1,389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX31YGR004W RTC1Q08281 1341 aa8.74□□□□□ -1.01
PEX31YGR004W ORC1P54784 914 aaPredicted RBP8.73□□□□□ -1.01
PEX31YGR004W BBC1P47068 1157 aa8.72□□□□□ -1.01
PEX31YGR004W SIS1P25294 352 aaKnown RBP8.7□□□□□ -1.02
PEX31YGR004W SEC7P11075 2009 aaKnown RBP8.69□□□□□ -1.02
PEX31YGR004W AI2P03876 854 aa8.68□□□□□ -1.02
PEX31YGR004W PDS5Q04264 1277 aa8.68□□□□□ -1.02
PEX31YGR004W IML1P47170 1584 aa8.68□□□□□ -1.02
PEX31YGR004W DRS2P39524 1355 aa8.68□□□□□ -1.02
PEX31YGR004W NUP188P52593 1655 aaKnown RBP8.66□□□□□ -1.02
PEX31YGR004W NUP192P47054 1683 aa8.65□□□□□ -1.02
PEX31YGR004W TAF5P38129 798 aa8.65□□□□□ -1.02
PEX31YGR004W NST1P53935 1240 aa8.65□□□□□ -1.02
PEX31YGR004W TRM3Q07527 1436 aa8.65□□□□□ -1.03
PEX31YGR004W DMA1P38823 416 aa8.64□□□□□ -1.03
PEX31YGR004W DOP1Q03921 1698 aa8.64□□□□□ -1.03
PEX31YGR004W KIP3P53086 805 aaKnown RBP8.62□□□□□ -1.03
PEX31YGR004W ESL2P36168 1195 aa8.61□□□□□ -1.03
PEX31YGR004W SSP1P38871 571 aa8.61□□□□□ -1.03
PEX31YGR004W YLR271WQ06152 274 aa8.61□□□□□ -1.03
PEX31YGR004W ARP8Q12386 881 aaKnown RBP RIP-Chip data8.61□□□□□ -1.03 RIP-Chip
PEX31YGR004W CFT1Q06632 1357 aaKnown RBP8.6□□□□□ -1.03
PEX31YGR004W DNF2Q12675 1612 aa8.58□□□□□ -1.04
PEX31YGR004W YOR238WQ08634 303 aa8.58□□□□□ -1.04
PEX31YGR004W MST1P07236 462 aa8.57□□□□□ -1.04
PEX31YGR004W SPE2P21182 396 aa8.54□□□□□ -1.04
PEX31YGR004W YBL029C-AQ3E756 94 aa8.53□□□□□ -1.04
PEX31YGR004W SCT1P32784 759 aa8.51□□□□□ -1.05
PEX31YGR004W BCK1Q01389 1478 aa8.5□□□□□ -1.05
PEX31YGR004W RPP0P05317 312 aaKnown RBP8.5□□□□□ -1.05
PEX31YGR004W YAP3P38749 330 aa8.5□□□□□ -1.05
PEX31YGR004W CDC45Q08032 650 aa8.49□□□□□ -1.05
PEX31YGR004W TYS1P36421 394 aaKnown RBP8.48□□□□□ -1.05
PEX31YGR004W RTG3P38165 486 aa8.48□□□□□ -1.05
PEX31YGR004W FUN12P39730 1002 aaKnown RBP8.48□□□□□ -1.05
PEX31YGR004W VPS27P40343 622 aaKnown RBP8.48□□□□□ -1.05
PEX31YGR004W YAP5P40574 245 aa8.48□□□□□ -1.05
PEX31YGR004W FKH1P40466 484 aa8.47□□□□□ -1.05
PEX31YGR004W IOC4Q04213 475 aa8.47□□□□□ -1.05
PEX31YGR004W RAD9P14737 1309 aa8.46□□□□□ -1.06
PEX31YGR004W TAF8Q03750 510 aa8.46□□□□□ -1.06
PEX31YGR004W RVB2Q12464 471 aaKnown RBP8.46□□□□□ -1.06
PEX31YGR004W IPL1P38991 367 aa8.45□□□□□ -1.06
PEX31YGR004W YEF3P16521 1044 aaKnown RBP8.44□□□□□ -1.06
PEX31YGR004W ALD4P46367 519 aaKnown RBP8.44□□□□□ -1.06
PEX31YGR004W YML133CQ03099 1374 aa8.43□□□□□ -1.06
PEX31YGR004W YLL067CQ07888 1374 aa8.43□□□□□ -1.06
PEX31YGR004W YLL066CQ99208 1374 aa8.43□□□□□ -1.06
PEX31YGR004W TRK1P12685 1235 aa8.43□□□□□ -1.06
PEX31YGR004W YDL144CQ07589 356 aa8.43□□□□□ -1.06
PEX31YGR004W WSC3Q12215 556 aa8.42□□□□□ -1.06
PEX31YGR004W RPC31P17890 251 aa8.41□□□□□ -1.06
PEX31YGR004W CHZ1P40019 153 aaPredicted RBP8.41□□□□□ -1.06
PEX31YGR004W VNX1P42839 908 aa8.41□□□□□ -1.06
PEX31YGR004W MLP1Q02455 1875 aaKnown RBP8.41□□□□□ -1.06
PEX31YGR004W SNF2P22082 1703 aa8.4□□□□□ -1.06
PEX31YGR004W SUI2P20459 304 aaKnown RBP8.4□□□□□ -1.06
PEX31YGR004W MGA2P40578 1113 aa8.4□□□□□ -1.06
PEX31YGR004W URN1Q06525 465 aaKnown RBP8.39□□□□□ -1.07
PEX31YGR004W YRB30P53107 440 aaPredicted RBP8.38□□□□□ -1.07
PEX31YGR004W HAP1P0CE41 1502 aa8.38□□□□□ -1.07
PEX31YGR004W MRM1P25270 412 aa8.37□□□□□ -1.07
PEX31YGR004W CAB1Q04430 367 aa8.37□□□□□ -1.07
PEX31YGR004W IME2P32581 645 aa8.35□□□□□ -1.07
PEX31YGR004W OPY1P38271 328 aa8.35□□□□□ -1.07
PEX31YGR004W MPP10P47083 593 aaKnown RBP8.35□□□□□ -1.07
PEX31YGR004W PIB1Q06651 286 aa8.35□□□□□ -1.07
PEX31YGR004W BNI1P41832 1953 aa8.35□□□□□ -1.07
PEX31YGR004W RRP46P53256 223 aaPredicted RBP8.35□□□□□ -1.07
PEX31YGR004W SPP1Q03012 353 aa8.35□□□□□ -1.07
PEX31YGR004W NAP1P25293 417 aaKnown RBP8.34□□□□□ -1.07
PEX31YGR004W FPR3P38911 411 aaKnown RBP8.34□□□□□ -1.07
PEX31YGR004W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.34□□□□□ -1.07not detected
PEX31YGR004W ITT1Q04638 464 aa8.34□□□□□ -1.07
PEX31YGR004W GTT3P39996 337 aa8.32□□□□□ -1.08
PEX31YGR004W CST9Q06032 482 aa8.31□□□□□ -1.08
PEX31YGR004W KRE5P22023 1365 aa8.31□□□□□ -1.08
PEX31YGR004W PSK1P31374 1356 aa8.31□□□□□ -1.08
PEX31YGR004W DNF3Q12674 1656 aa8.3□□□□□ -1.08
PEX31YGR004W RTR1P40084 226 aaPredicted RBP8.3□□□□□ -1.08
PEX31YGR004W ABP1P15891 592 aaKnown RBP8.29□□□□□ -1.08
PEX31YGR004W SAP155P43612 1002 aa8.29□□□□□ -1.08
PEX31YGR004W YIR014WP40570 242 aa8.27□□□□□ -1.09
PEX31YGR004W YFR016CP43597 1233 aaKnown RBP8.27□□□□□ -1.09
PEX31YGR004W THI22Q06490 572 aa8.27□□□□□ -1.09
PEX31YGR004W AUS1Q08409 1394 aa8.25□□□□□ -1.09
PEX31YGR004W KAR2P16474 682 aaKnown RBP8.25□□□□□ -1.09
PEX31YGR004W PPH3P32345 308 aa8.25□□□□□ -1.09
PEX31YGR004W RCM1P53972 490 aa8.25□□□□□ -1.09
PEX31YGR004W HEF3P53978 1044 aaKnown RBP8.25□□□□□ -1.09
PEX31YGR004W TAP42Q04372 366 aa8.25□□□□□ -1.09
PEX31YGR004W RAD2P07276 1031 aa8.24□□□□□ -1.09
PEX31YGR004W PRD1P25375 712 aa8.24□□□□□ -1.09
PEX31YGR004W YIL092WP40497 633 aa8.24□□□□□ -1.09
PEX31YGR004W YPR148CQ06523 435 aa8.24□□□□□ -1.09
PEX31YGR004W SIR4P11978 1358 aa8.24□□□□□ -1.09
PEX31YGR004W CLC1P17891 233 aa8.23□□□□□ -1.09
PEX31YGR004W TPD3P31383 635 aa8.23□□□□□ -1.09
PEX31YGR004W TIF11P38912 153 aaKnown RBP8.23□□□□□ -1.09
PEX31YGR004W MRX12P47084 519 aa8.22□□□□□ -1.09
Retrieved 100 of 5,963 RNA–protein pairs in 118.1 ms