RNA–Protein interactions for RNA: ENST00000640769.1

RTTN-222, Transcript of rotatin, human

APPRIS P1 TSL 2 BASIC

Gene RTTN, Length 8,088 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-222	ENST00000640769	HSP90AB3P	Q58FF7	597 aa		10.89	□□□□□ -0.67
RTTN-222	ENST00000640769	APBB1	O00213	710 aa		10.88	□□□□□ -0.67
RTTN-222	ENST00000640769	STK11IP	Q8N1F8	1099 aa		10.88	□□□□□ -0.67
RTTN-222	ENST00000640769	WWC1	Q8IX03	1113 aa		10.88	□□□□□ -0.67
RTTN-222	ENST00000640769	CHIC2	Q9UKJ5	165 aa		10.88	□□□□□ -0.67
RTTN-222	ENST00000640769	HTATSF1	O43719	755 aa	Known RBP	10.88	□□□□□ -0.67
RTTN-222	ENST00000640769	PES1	O00541	588 aa	Known RBP	10.87	□□□□□ -0.67
RTTN-222	ENST00000640769	CALD1	Q05682	793 aa	Known RBP	10.87	□□□□□ -0.67
RTTN-222	ENST00000640769	CEP89	Q96ST8	783 aa		10.86	□□□□□ -0.67
RTTN-222	ENST00000640769	RDX	P35241	583 aa	Known RBP	10.86	□□□□□ -0.67
RTTN-222	ENST00000640769	NOL8	Q76FK4	1167 aa	Known RBP	10.85	□□□□□ -0.67
RTTN-222	ENST00000640769	EIF4G2	P78344	907 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
RTTN-222	ENST00000640769	ZNF526	Q8TF50	670 aa	Predicted RBP	10.83	□□□□□ -0.68
RTTN-222	ENST00000640769	PHF14	O94880	888 aa		10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	IPO9	Q96P70	1041 aa	Known RBP	10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	MFAP1	P55081	439 aa	Known RBP	10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	FOXD4L3	Q6VB84	417 aa	Predicted RBP	10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	KIAA1211	Q6ZU35	1233 aa		10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	CCDC70	Q6NSX1	233 aa		10.82	□□□□□ -0.68
RTTN-222	ENST00000640769	SKIDA1	Q1XH10	827 aa		10.81	□□□□□ -0.68
RTTN-222	ENST00000640769		H0YHG0	523 aa		10.81	□□□□□ -0.68
RTTN-222	ENST00000640769	TSHZ2	Q9NRE2	1034 aa		10.81	□□□□□ -0.68
RTTN-222	ENST00000640769	CFAP53	Q96M91	514 aa		10.8	□□□□□ -0.68
RTTN-222	ENST00000640769	RASSF8	Q8NHQ8	419 aa		10.8	□□□□□ -0.68
RTTN-222	ENST00000640769	MAPK8IP3	Q9UPT6	1336 aa		10.8	□□□□□ -0.68
RTTN-222	ENST00000640769	CC2D1B	Q5T0F9	858 aa	Known RBP	10.8	□□□□□ -0.68
RTTN-222	ENST00000640769	GSE1	Q14687	1217 aa		10.79	□□□□□ -0.68
RTTN-222	ENST00000640769	CCDC191	Q8NCU4	936 aa		10.79	□□□□□ -0.68
RTTN-222	ENST00000640769	TPD52L1	Q16890	204 aa	Predicted RBP	10.79	□□□□□ -0.68
RTTN-222	ENST00000640769	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	10.78	□□□□□ -0.68
RTTN-222	ENST00000640769	KNSTRN	Q9Y448	316 aa		10.78	□□□□□ -0.68
RTTN-222	ENST00000640769	RBM25	P49756	843 aa	Known RBP	10.78	□□□□□ -0.68
RTTN-222	ENST00000640769	TSR1	Q2NL82	804 aa	Known RBP	10.77	□□□□□ -0.69
RTTN-222	ENST00000640769	RUFY1	Q96T51	708 aa		10.77	□□□□□ -0.69
RTTN-222	ENST00000640769	GOLGA6L19	H0YKK7	550 aa		10.76	□□□□□ -0.69
RTTN-222	ENST00000640769	CSPP1	Q1MSJ5	1256 aa		10.76	□□□□□ -0.69
RTTN-222	ENST00000640769	AK7	Q96M32	723 aa		10.76	□□□□□ -0.69
RTTN-222	ENST00000640769	SLC4A3	P48751	1232 aa		10.76	□□□□□ -0.69
RTTN-222	ENST00000640769	AEBP1	Q8IUX7	1158 aa		10.76	□□□□□ -0.69
RTTN-222	ENST00000640769	CWC15	Q9P013	229 aa	Known RBP	10.76	□□□□□ -0.69
RTTN-222	ENST00000640769	RBM10	P98175	930 aa	Known RBP	10.75	□□□□□ -0.69
RTTN-222	ENST00000640769	HOMER1	Q86YM7	354 aa		10.75	□□□□□ -0.69
RTTN-222	ENST00000640769	HAP1	P54257	671 aa	Predicted RBP	10.75	□□□□□ -0.69
RTTN-222	ENST00000640769	CHMP4B	Q9H444	224 aa	Known RBP	10.75	□□□□□ -0.69
RTTN-222	ENST00000640769	HMMR	O75330	724 aa		10.74	□□□□□ -0.69
RTTN-222	ENST00000640769	U2SURP	O15042	1029 aa	Known RBP	10.74	□□□□□ -0.69
RTTN-222	ENST00000640769	R3HCC1	Q9Y3T6	440 aa	Known RBP	10.73	□□□□□ -0.69
RTTN-222	ENST00000640769	DDX11L8	A8MPP1	907 aa		10.73	□□□□□ -0.69
RTTN-222	ENST00000640769	MS4A1	P11836	297 aa		10.73	□□□□□ -0.69
RTTN-222	ENST00000640769	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	10.73	□□□□□ -0.69
RTTN-222	ENST00000640769	CCDC66	A2RUB6	948 aa		10.72	□□□□□ -0.69
RTTN-222	ENST00000640769	TRIM6-TRIM34	B2RNG4	842 aa		10.72	□□□□□ -0.69
RTTN-222	ENST00000640769	DYDC1	Q8WWB3	177 aa		10.72	□□□□□ -0.69
RTTN-222	ENST00000640769	FAM43A	Q8N2R8	423 aa		10.72	□□□□□ -0.69
RTTN-222	ENST00000640769	VPS53	Q5VIR6	699 aa		10.72	□□□□□ -0.69
RTTN-222	ENST00000640769	FBXW7	Q969H0	707 aa		10.72	□□□□□ -0.69
RTTN-222	ENST00000640769	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.71	□□□□□ -0.69
RTTN-222	ENST00000640769	DDX49	Q9Y6V7	483 aa	Known RBP	10.71	□□□□□ -0.7
RTTN-222	ENST00000640769	SF3A1	Q15459	793 aa	Known RBP	10.7	□□□□□ -0.7
RTTN-222	ENST00000640769	RGL3	Q3MIN7	710 aa		10.7	□□□□□ -0.7
RTTN-222	ENST00000640769	CHMP3	Q9Y3E7	222 aa		10.7	□□□□□ -0.7
RTTN-222	ENST00000640769	CCDC34	Q96HJ3	373 aa		10.7	□□□□□ -0.7
RTTN-222	ENST00000640769	TSPYL1	Q9H0U9	437 aa		10.7	□□□□□ -0.7
RTTN-222	ENST00000640769	BECN2	A8MW95	431 aa		10.69	□□□□□ -0.7
RTTN-222	ENST00000640769	CFAP44	Q96MT7	982 aa		10.69	□□□□□ -0.7
RTTN-222	ENST00000640769	TPM1	P09493	284 aa		10.69	□□□□□ -0.7
RTTN-222	ENST00000640769	HSP90B2P	Q58FF3	399 aa		10.68	□□□□□ -0.7
RTTN-222	ENST00000640769	DCAF1	Q9Y4B6	1507 aa		10.68	□□□□□ -0.7
RTTN-222	ENST00000640769	NEFH	P12036	1026 aa		10.68	□□□□□ -0.7
RTTN-222	ENST00000640769	ITPRIP	Q8IWB1	547 aa		10.68	□□□□□ -0.7
RTTN-222	ENST00000640769	KIF16B	Q96L93	1317 aa		10.68	□□□□□ -0.7
RTTN-222	ENST00000640769	IFT57	Q9NWB7	429 aa		10.68	□□□□□ -0.7
RTTN-222	ENST00000640769	TCERG1	O14776	1098 aa	Known RBP	10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	NAP1L1	P55209	391 aa	Known RBP	10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	LEKR1	Q6ZMV7	388 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	ARGLU1	Q9NWB6	273 aa	Predicted RBP	10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	TPM2	P07951	284 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	GORAB	Q5T7V8	394 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769		H3BQV1	296 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	IFFO2	Q5TF58	517 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	DCTN1	Q14203	1278 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	GPATCH11	Q8N954	259 aa		10.67	□□□□□ -0.7
RTTN-222	ENST00000640769	ERICH4	A6NGS2	130 aa		10.66	□□□□□ -0.7
RTTN-222	ENST00000640769	MNS1	Q8NEH6	495 aa		10.66	□□□□□ -0.7
RTTN-222	ENST00000640769	LMOD2	Q6P5Q4	547 aa		10.65	□□□□□ -0.7
RTTN-222	ENST00000640769	ACBD3	Q9H3P7	528 aa		10.65	□□□□□ -0.7
RTTN-222	ENST00000640769	NUDC	Q9Y266	331 aa		10.65	□□□□□ -0.7
RTTN-222	ENST00000640769	TNNT1	P13805	278 aa		10.65	□□□□□ -0.7
RTTN-222	ENST00000640769	TTLL5	Q6EMB2	1281 aa		10.65	□□□□□ -0.7
RTTN-222	ENST00000640769	CENPH	Q9H3R5	247 aa		10.65	□□□□□ -0.71
RTTN-222	ENST00000640769	RRP7BP	Q9NSQ0	103 aa		10.65	□□□□□ -0.71
RTTN-222	ENST00000640769	CDR1	P51861	262 aa		10.65	□□□□□ -0.71
RTTN-222	ENST00000640769	MARCH6	O60337	910 aa		10.64	□□□□□ -0.71
RTTN-222	ENST00000640769	IBSP	P21815	317 aa	Predicted RBP	10.64	□□□□□ -0.71
RTTN-222	ENST00000640769	KRI1	Q8N9T8	703 aa	Known RBP	10.64	□□□□□ -0.71
RTTN-222	ENST00000640769	KIF3A	Q9Y496	699 aa		10.64	□□□□□ -0.71
RTTN-222	ENST00000640769	TAF3	Q5VWG9	929 aa		10.64	□□□□□ -0.71
RTTN-222	ENST00000640769	PPP1R15A	O75807	674 aa	Predicted RBP	10.64	□□□□□ -0.71
RTTN-222	ENST00000640769	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	10.64	□□□□□ -0.71

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms