RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
SPIN3-242ENST00000640577 PLEKHD1A6NEE1 506 aa22.31■■□□□ 1.16
SPIN3-242ENST00000640577 CDC42BPAQ5VT25 1732 aa22.31■■□□□ 1.16
SPIN3-242ENST00000640577 DENND4BO75064 1496 aaPredicted RBP22.31■■□□□ 1.16
SPIN3-242ENST00000640577 ABCC10Q5T3U5 1492 aa22.3■■□□□ 1.16
SPIN3-242ENST00000640577 ZNF777Q9ULD5 760 aaPredicted RBP22.27■■□□□ 1.16
SPIN3-242ENST00000640577 CLASP1Q7Z460 1538 aa22.27■■□□□ 1.16
SPIN3-242ENST00000640577 ROCK1Q13464 1354 aa22.26■■□□□ 1.15
SPIN3-242ENST00000640577 MIER1Q8N108 512 aa22.25■■□□□ 1.15
SPIN3-242ENST00000640577 TRIM52Q96A61 297 aa22.22■■□□□ 1.15
SPIN3-242ENST00000640577 TIMELESSQ9UNS1 1208 aa22.21■■□□□ 1.15
SPIN3-242ENST00000640577 CROCC2H7BZ55 1655 aa22.21■■□□□ 1.15
SPIN3-242ENST00000640577 PPP1R15AO75807 674 aaPredicted RBP22.2■■□□□ 1.14
SPIN3-242ENST00000640577 ADGBQ8N7X0 1667 aa22.17■■□□□ 1.14
SPIN3-242ENST00000640577 NCOA1Q15788 1441 aa22.17■■□□□ 1.14
SPIN3-242ENST00000640577 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
SPIN3-242ENST00000640577 MPHOSPH9Q99550 1183 aa22.17■■□□□ 1.14
SPIN3-242ENST00000640577 CDC42BPBQ9Y5S2 1711 aa22.15■■□□□ 1.14
SPIN3-242ENST00000640577 FOXD1Q16676 465 aa22.15■■□□□ 1.14
SPIN3-242ENST00000640577 TONSLQ96HA7 1378 aa22.14■■□□□ 1.14
SPIN3-242ENST00000640577 KDM5BQ9UGL1 1544 aa22.14■■□□□ 1.14
SPIN3-242ENST00000640577 ADGRL2O95490 1459 aa22.12■■□□□ 1.13
SPIN3-242ENST00000640577 TTC37Q6PGP7 1564 aa22.11■■□□□ 1.13
SPIN3-242ENST00000640577 PREX2Q70Z35 1606 aa22.1■■□□□ 1.13
SPIN3-242ENST00000640577 SAMD9LQ8IVG5 1584 aa22.09■■□□□ 1.13
SPIN3-242ENST00000640577 SCAF1Q9H7N4 1312 aaKnown RBP22.08■■□□□ 1.13
SPIN3-242ENST00000640577 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.12
SPIN3-242ENST00000640577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.08■■□□□ 1.12
SPIN3-242ENST00000640577 ZCCHC11Q5TAX3 1644 aaKnown RBP22.06■■□□□ 1.12
SPIN3-242ENST00000640577 MBD5Q9P267 1494 aa22.06■■□□□ 1.12
SPIN3-242ENST00000640577 HIRIP3Q9BW71 556 aaPredicted RBP22.05■■□□□ 1.12
SPIN3-242ENST00000640577 C9orf84Q5VXU9 1444 aa22.05■■□□□ 1.12
SPIN3-242ENST00000640577 PZPP20742 1482 aa22.05■■□□□ 1.12
SPIN3-242ENST00000640577 ANKRD30AQ9BXX3 1397 aa22.05■■□□□ 1.12
SPIN3-242ENST00000640577 SHANK2Q9UPX8 1470 aa22.04■■□□□ 1.12
SPIN3-242ENST00000640577 ANKRD30BQ9BXX2 1392 aa22.03■■□□□ 1.12
SPIN3-242ENST00000640577 ARHGEF5Q12774 1597 aa22.03■■□□□ 1.12
SPIN3-242ENST00000640577 UHRF1BP1LA0JNW5 1464 aa22.02■■□□□ 1.12
SPIN3-242ENST00000640577 SLC4A1APQ9BWU0 796 aaKnown RBP22.02■■□□□ 1.12
SPIN3-242ENST00000640577 KCNH8Q96L42 1107 aa22.01■■□□□ 1.11
SPIN3-242ENST00000640577 ANKRD50Q9ULJ7 1429 aa22■■□□□ 1.11
SPIN3-242ENST00000640577 MYO5CQ9NQX4 1742 aa21.98■■□□□ 1.11
SPIN3-242ENST00000640577 ARHGAP5Q13017 1502 aa21.98■■□□□ 1.11
SPIN3-242ENST00000640577 YTHDC1Q96MU7 727 aaKnown RBP21.98■■□□□ 1.11
SPIN3-242ENST00000640577 SYCP2Q9BX26 1530 aa21.97■■□□□ 1.11
SPIN3-242ENST00000640577 TSPY4P0CV99 314 aa21.97■■□□□ 1.11
SPIN3-242ENST00000640577 TSPY10P0CW01 314 aa21.97■■□□□ 1.11
SPIN3-242ENST00000640577 ACIN1Q9UKV3 1341 aaKnown RBP21.96■■□□□ 1.11
SPIN3-242ENST00000640577 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
SPIN3-242ENST00000640577 RPRD2Q5VT52 1461 aaKnown RBP21.95■■□□□ 1.1
SPIN3-242ENST00000640577 L3MBTL2Q969R5 705 aa21.95■■□□□ 1.1
SPIN3-242ENST00000640577 KIF15Q9NS87 1388 aa21.93■■□□□ 1.1
SPIN3-242ENST00000640577 DDX10Q13206 875 aaKnown RBP21.9■■□□□ 1.1
SPIN3-242ENST00000640577 TEX14Q8IWB6 1497 aa21.9■■□□□ 1.1
SPIN3-242ENST00000640577 ARHGEF12Q9NZN5 1544 aa21.9■■□□□ 1.1
SPIN3-242ENST00000640577 PKD2Q13563 968 aa21.88■■□□□ 1.09
SPIN3-242ENST00000640577 KIAA1107Q9UPP5 1409 aa21.88■■□□□ 1.09
SPIN3-242ENST00000640577 NUP155O75694 1391 aa21.88■■□□□ 1.09
SPIN3-242ENST00000640577 PLCH2O75038 1416 aa21.87■■□□□ 1.09
SPIN3-242ENST00000640577 CENPBP07199 599 aaPredicted RBP21.87■■□□□ 1.09
SPIN3-242ENST00000640577 RSPH4AQ5TD94 716 aa21.85■■□□□ 1.09
SPIN3-242ENST00000640577 MAST1Q9Y2H9 1570 aa21.85■■□□□ 1.09
SPIN3-242ENST00000640577 KDM5DQ9BY66 1539 aa21.84■■□□□ 1.09
SPIN3-242ENST00000640577 NBPF8Q3BBV2 869 aa21.83■■□□□ 1.09
SPIN3-242ENST00000640577 OSCARQ8IYS5 282 aa21.81■■□□□ 1.08
SPIN3-242ENST00000640577 PLEKHH2Q8IVE3 1493 aa21.81■■□□□ 1.08
SPIN3-242ENST00000640577 WDR7Q9Y4E6 1490 aa21.8■■□□□ 1.08
SPIN3-242ENST00000640577 ABCC1P33527 1531 aa21.79■■□□□ 1.08
SPIN3-242ENST00000640577 EFCAB2Q5VUJ9 269 aa21.79■■□□□ 1.08
SPIN3-242ENST00000640577 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
SPIN3-242ENST00000640577 PLXNC1O60486 1568 aa21.78■■□□□ 1.08
SPIN3-242ENST00000640577 TRAPPC8Q9Y2L5 1435 aa21.77■■□□□ 1.08
SPIN3-242ENST00000640577 FAM135AQ9P2D6 1515 aa21.75■■□□□ 1.07
SPIN3-242ENST00000640577 UNC13BO14795 1591 aa21.72■■□□□ 1.07
SPIN3-242ENST00000640577 ASXL2Q76L83 1435 aa21.72■■□□□ 1.07
SPIN3-242ENST00000640577 ABCA9Q8IUA7 1624 aa21.71■■□□□ 1.07
SPIN3-242ENST00000640577 ARAP3Q8WWN8 1544 aa21.71■■□□□ 1.07
SPIN3-242ENST00000640577 EIF4G2P78344 907 aaKnown RBP eCLIP21.7■■□□□ 1.06
SPIN3-242ENST00000640577 AFAP1Q8N556 730 aa21.69■■□□□ 1.06
SPIN3-242ENST00000640577 GTF3C3Q9Y5Q9 886 aa21.69■■□□□ 1.06
SPIN3-242ENST00000640577 WASHC2AQ641Q2 1341 aa21.69■■□□□ 1.06
SPIN3-242ENST00000640577 DUOX2Q9NRD8 1548 aa21.68■■□□□ 1.06
SPIN3-242ENST00000640577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.68■■□□□ 1.06
SPIN3-242ENST00000640577 C11orf95C9JLR9 678 aaPredicted RBP21.66■■□□□ 1.06
SPIN3-242ENST00000640577 FANCAO15360 1455 aa21.66■■□□□ 1.06
SPIN3-242ENST00000640577 IQGAP3Q86VI3 1631 aa21.65■■□□□ 1.06
SPIN3-242ENST00000640577 SPATA31E1Q6ZUB1 1445 aa21.64■■□□□ 1.06
SPIN3-242ENST00000640577 ZFYVE16Q7Z3T8 1539 aa21.64■■□□□ 1.05
SPIN3-242ENST00000640577 ZNF326Q5BKZ1 582 aaKnown RBP21.63■■□□□ 1.05
SPIN3-242ENST00000640577 ERBINQ96RT1 1412 aa21.63■■□□□ 1.05
SPIN3-242ENST00000640577 PLA2R1Q13018 1463 aa21.63■■□□□ 1.05
SPIN3-242ENST00000640577 MAGI2Q86UL8 1455 aa21.62■■□□□ 1.05
SPIN3-242ENST00000640577 SPAG9O60271 1321 aaKnown RBP21.62■■□□□ 1.05
SPIN3-242ENST00000640577 RTEL1-TNFRSF6BF6WH68 1400 aa21.58■■□□□ 1.04
SPIN3-242ENST00000640577 ADGRL1O94910 1474 aa21.57■■□□□ 1.04
SPIN3-242ENST00000640577 UHRF1BP1Q6BDS2 1440 aa21.57■■□□□ 1.04
SPIN3-242ENST00000640577 INO80Q9ULG1 1556 aaPredicted RBP21.57■■□□□ 1.04
SPIN3-242ENST00000640577 SCAPERQ9BY12 1400 aa21.56■■□□□ 1.04
SPIN3-242ENST00000640577 ANP32CO43423 234 aa21.56■■□□□ 1.04
SPIN3-242ENST00000640577 CCDC7Q96M83 1385 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms