RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 KRI1Q8N9T8 703 aaKnown RBP24.16■■□□□ 1.46
CACNA1A-257ENST00000638009 FRAT1Q92837 279 aaPredicted RBP24.15■■□□□ 1.46
CACNA1A-257ENST00000638009 CCDC191Q8NCU4 936 aa24.14■■□□□ 1.45
CACNA1A-257ENST00000638009 RASSF8Q8NHQ8 419 aa24.12■■□□□ 1.45
CACNA1A-257ENST00000638009 DCTN1Q14203 1278 aa24.12■■□□□ 1.45
CACNA1A-257ENST00000638009 ARID3AQ99856 593 aa24.11■■□□□ 1.45
CACNA1A-257ENST00000638009 ZNF771Q7L3S4 317 aaPredicted RBP24.11■■□□□ 1.45
CACNA1A-257ENST00000638009 APPP05067 770 aa24.11■■□□□ 1.45
CACNA1A-257ENST00000638009 IPO7O95373 1038 aaKnown RBP24.11■■□□□ 1.45
CACNA1A-257ENST00000638009 MIER1Q8N108 512 aa24.11■■□□□ 1.45
CACNA1A-257ENST00000638009 ACBD3Q9H3P7 528 aa24.09■■□□□ 1.45
CACNA1A-257ENST00000638009 DDX11L8A8MPP1 907 aa24.09■■□□□ 1.45
CACNA1A-257ENST00000638009 AK7Q96M32 723 aa24.09■■□□□ 1.45
CACNA1A-257ENST00000638009 ATP6V1DQ9Y5K8 247 aa24.09■■□□□ 1.45
CACNA1A-257ENST00000638009 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.09■■□□□ 1.45
CACNA1A-257ENST00000638009 CWC15Q9P013 229 aaKnown RBP24.08■■□□□ 1.45
CACNA1A-257ENST00000638009 TCERG1O14776 1098 aaKnown RBP24.08■■□□□ 1.45
CACNA1A-257ENST00000638009 GOLGA6L19H0YKK7 550 aa24.07■■□□□ 1.44
CACNA1A-257ENST00000638009 MTERF4Q7Z6M4 381 aaKnown RBP24.06■■□□□ 1.44
CACNA1A-257ENST00000638009 TPD52L1Q16890 204 aaPredicted RBP24.05■■□□□ 1.44
CACNA1A-257ENST00000638009 MAP7D2Q96T17 732 aa24.05■■□□□ 1.44
CACNA1A-257ENST00000638009 KIF16BQ96L93 1317 aa24.04■■□□□ 1.44
CACNA1A-257ENST00000638009 RUFY1Q96T51 708 aa24.04■■□□□ 1.44
CACNA1A-257ENST00000638009 RDXP35241 583 aaKnown RBP24.03■■□□□ 1.44
CACNA1A-257ENST00000638009 STK11IPQ8N1F8 1099 aa24.02■■□□□ 1.44
CACNA1A-257ENST00000638009 ANKRD20A12PQ8NF67 263 aa24.01■■□□□ 1.43
CACNA1A-257ENST00000638009 ST18O60284 1047 aa24.01■■□□□ 1.43
CACNA1A-257ENST00000638009 ZRSR2Q15696 482 aaKnown RBP24■■□□□ 1.43
CACNA1A-257ENST00000638009 PATL2C9JE40 543 aaKnown RBP23.99■■□□□ 1.43
CACNA1A-257ENST00000638009 MYO6Q9UM54 1294 aa23.99■■□□□ 1.43
CACNA1A-257ENST00000638009 HOOK1Q9UJC3 728 aaKnown RBP23.98■■□□□ 1.43
CACNA1A-257ENST00000638009 SKOR2Q2VWA4 1001 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-257ENST00000638009 GZF1Q9H116 711 aaPredicted RBP23.98■■□□□ 1.43
CACNA1A-257ENST00000638009 RTF1Q92541 710 aaKnown RBP23.97■■□□□ 1.43
CACNA1A-257ENST00000638009 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.96■■□□□ 1.43
CACNA1A-257ENST00000638009 ARGLU1Q9NWB6 273 aaPredicted RBP23.96■■□□□ 1.43
CACNA1A-257ENST00000638009 CHIC2Q9UKJ5 165 aa23.95■■□□□ 1.42
CACNA1A-257ENST00000638009 NEXNQ0ZGT2 675 aa23.95■■□□□ 1.42
CACNA1A-257ENST00000638009 RWDD1Q9H446 243 aaPredicted RBP23.94■■□□□ 1.42
CACNA1A-257ENST00000638009 HSP90B2PQ58FF3 399 aa23.93■■□□□ 1.42
CACNA1A-257ENST00000638009 CCAR2Q8N163 923 aaKnown RBP23.93■■□□□ 1.42
CACNA1A-257ENST00000638009 PDE4CQ08493 712 aa23.93■■□□□ 1.42
CACNA1A-257ENST00000638009 PES1O00541 588 aaKnown RBP23.92■■□□□ 1.42
CACNA1A-257ENST00000638009 PMFBP1Q8TBY8 1022 aa23.92■■□□□ 1.42
CACNA1A-257ENST00000638009 NEUROD2Q15784 382 aa23.91■■□□□ 1.42
CACNA1A-257ENST00000638009 CAGE1Q8TC20 777 aa23.91■■□□□ 1.42
CACNA1A-257ENST00000638009 SF3A1Q15459 793 aaKnown RBP23.91■■□□□ 1.42
CACNA1A-257ENST00000638009 CREBRFQ8IUR6 639 aa23.91■■□□□ 1.42
CACNA1A-257ENST00000638009 SPRYD3Q8NCJ5 442 aa23.91■■□□□ 1.42
CACNA1A-257ENST00000638009 POGKQ9P215 609 aa23.9■■□□□ 1.42
CACNA1A-257ENST00000638009 CARD11Q9BXL7 1154 aa23.89■■□□□ 1.42
CACNA1A-257ENST00000638009 CCDC66A2RUB6 948 aa23.89■■□□□ 1.41
CACNA1A-257ENST00000638009 ANO8Q9HCE9 1232 aaPredicted RBP23.88■■□□□ 1.41
CACNA1A-257ENST00000638009 TCEAL9Q9UHQ7 104 aa23.88■■□□□ 1.41
CACNA1A-257ENST00000638009 BECN2A8MW95 431 aa23.87■■□□□ 1.41
CACNA1A-257ENST00000638009 GORABQ5T7V8 394 aa23.87■■□□□ 1.41
CACNA1A-257ENST00000638009 LRRFIP1Q32MZ4 808 aaKnown RBP23.87■■□□□ 1.41
CACNA1A-257ENST00000638009 CCDC173Q0VFZ6 552 aa23.86■■□□□ 1.41
CACNA1A-257ENST00000638009 U2SURPO15042 1029 aaKnown RBP23.86■■□□□ 1.41
CACNA1A-257ENST00000638009 PLEKHG5O94827 1062 aa23.86■■□□□ 1.41
CACNA1A-257ENST00000638009 HDGFP51858 240 aaKnown RBP23.85■■□□□ 1.41
CACNA1A-257ENST00000638009 MARCH6O60337 910 aa23.85■■□□□ 1.41
CACNA1A-257ENST00000638009 INCENPQ9NQS7 918 aa23.84■■□□□ 1.41
CACNA1A-257ENST00000638009 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.84■■□□□ 1.41
CACNA1A-257ENST00000638009 H0YHG0 523 aa23.83■■□□□ 1.41
CACNA1A-257ENST00000638009 B4GALNT3Q6L9W6 998 aa23.83■■□□□ 1.41
CACNA1A-257ENST00000638009 SPAG9O60271 1321 aaKnown RBP23.82■■□□□ 1.4
CACNA1A-257ENST00000638009 CCDC47Q96A33 483 aaKnown RBP23.82■■□□□ 1.4
CACNA1A-257ENST00000638009 H3BQV1 296 aa23.82■■□□□ 1.4
CACNA1A-257ENST00000638009 IFFO2Q5TF58 517 aa23.82■■□□□ 1.4
CACNA1A-257ENST00000638009 VSIG10Q8N0Z9 540 aa23.81■■□□□ 1.4
CACNA1A-257ENST00000638009 ERCC4Q92889 916 aaPredicted RBP23.81■■□□□ 1.4
CACNA1A-257ENST00000638009 ODF2Q5BJF6 829 aa23.8■■□□□ 1.4
CACNA1A-257ENST00000638009 TMF1P82094 1093 aa23.78■■□□□ 1.4
CACNA1A-257ENST00000638009 GOLGA6L7A0A1B0GV03 622 aa23.78■■□□□ 1.4
CACNA1A-257ENST00000638009 VPS53Q5VIR6 699 aa23.78■■□□□ 1.4
CACNA1A-257ENST00000638009 SLKQ9H2G2 1235 aaPredicted RBP23.78■■□□□ 1.4
CACNA1A-257ENST00000638009 KANK1Q14678 1352 aa23.78■■□□□ 1.4
CACNA1A-257ENST00000638009 AKAP17AQ02040 695 aaKnown RBP23.78■■□□□ 1.4
CACNA1A-257ENST00000638009 TRIM6-TRIM34B2RNG4 842 aa23.77■■□□□ 1.4
CACNA1A-257ENST00000638009 LMOD2Q6P5Q4 547 aa23.77■■□□□ 1.4
CACNA1A-257ENST00000638009 RBM19Q9Y4C8 960 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-257ENST00000638009 IPO9Q96P70 1041 aaKnown RBP23.76■■□□□ 1.39
CACNA1A-257ENST00000638009 CLIP1P30622 1438 aa23.75■■□□□ 1.39
CACNA1A-257ENST00000638009 CNKSR2Q8WXI2 1034 aa23.75■■□□□ 1.39
CACNA1A-257ENST00000638009 TAF7LQ5H9L4 462 aa23.75■■□□□ 1.39
CACNA1A-257ENST00000638009 PHLDB1Q86UU1 1377 aa23.73■■□□□ 1.39
CACNA1A-257ENST00000638009 HOMER1Q86YM7 354 aa23.73■■□□□ 1.39
CACNA1A-257ENST00000638009 KTN1Q86UP2 1357 aaKnown RBP23.72■■□□□ 1.39
CACNA1A-257ENST00000638009 CT47A1Q5JQC4 288 aaPredicted RBP23.71■■□□□ 1.39
CACNA1A-257ENST00000638009 CPLX2Q6PUV4 134 aaKnown RBP23.71■■□□□ 1.39
CACNA1A-257ENST00000638009 G3V3G9 751 aa23.71■■□□□ 1.39
CACNA1A-257ENST00000638009 DCAF8Q5TAQ9 597 aa23.71■■□□□ 1.39
CACNA1A-257ENST00000638009 DYDC1Q8WWB3 177 aa23.7■■□□□ 1.38
CACNA1A-257ENST00000638009 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.7■■□□□ 1.387e-11■■■■■ 260.8
CACNA1A-257ENST00000638009 DIAPH3Q9NSV4 1193 aa23.69■■□□□ 1.38
CACNA1A-257ENST00000638009 FAM184AQ8NB25 1140 aa23.69■■□□□ 1.38
CACNA1A-257ENST00000638009 EEA1Q15075 1411 aa23.69■■□□□ 1.38
CACNA1A-257ENST00000638009 CCER2I3L3R5 266 aa23.68■■□□□ 1.38
CACNA1A-257ENST00000638009 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms