RNA–Protein interactions for RNA: ENST00000637815.1

CTSD-212, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 2,003 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-212ENST00000637815 ABCC5O15440 1437 aa26.57■■□□□ 1.84
CTSD-212ENST00000637815 YTHDC1Q96MU7 727 aaKnown RBP26.56■■□□□ 1.84
CTSD-212ENST00000637815 CHD1O14646 1710 aa26.53■■□□□ 1.84
CTSD-212ENST00000637815 KDM5BQ9UGL1 1544 aa26.52■■□□□ 1.84
CTSD-212ENST00000637815 GPATCH8Q9UKJ3 1502 aaKnown RBP26.52■■□□□ 1.84
CTSD-212ENST00000637815 CAMSAP2Q08AD1 1489 aa26.52■■□□□ 1.84
CTSD-212ENST00000637815 ADGBQ8N7X0 1667 aa26.51■■□□□ 1.83
CTSD-212ENST00000637815 CROCC2H7BZ55 1655 aa26.5■■□□□ 1.83
CTSD-212ENST00000637815 ZNF644Q9H582 1327 aaPredicted RBP26.49■■□□□ 1.83
CTSD-212ENST00000637815 CDC42BPAQ5VT25 1732 aa26.47■■□□□ 1.83
CTSD-212ENST00000637815 GTF3C3Q9Y5Q9 886 aa26.47■■□□□ 1.83
CTSD-212ENST00000637815 ATP10BO94823 1461 aa26.46■■□□□ 1.83
CTSD-212ENST00000637815 TRIM52Q96A61 297 aa26.43■■□□□ 1.82
CTSD-212ENST00000637815 CFDP1Q9UEE9 299 aaPredicted RBP26.43■■□□□ 1.82
CTSD-212ENST00000637815 SHROOM2Q13796 1616 aa26.43■■□□□ 1.82
CTSD-212ENST00000637815 MPHOSPH9Q99550 1183 aa26.42■■□□□ 1.82
CTSD-212ENST00000637815 ABCC10Q5T3U5 1492 aa26.42■■□□□ 1.82
CTSD-212ENST00000637815 ADGRL2O95490 1459 aa26.41■■□□□ 1.82
CTSD-212ENST00000637815 PLEKHD1A6NEE1 506 aa26.36■■□□□ 1.81
CTSD-212ENST00000637815 PTPRGP23470 1445 aa26.36■■□□□ 1.81
CTSD-212ENST00000637815 NCOA1Q15788 1441 aa26.36■■□□□ 1.81
CTSD-212ENST00000637815 ANKRD30BQ9BXX2 1392 aa26.31■■□□□ 1.8
CTSD-212ENST00000637815 SHANK2Q9UPX8 1470 aa26.3■■□□□ 1.8
CTSD-212ENST00000637815 DDX10Q13206 875 aaKnown RBP26.3■■□□□ 1.8
CTSD-212ENST00000637815 RPRD2Q5VT52 1461 aaKnown RBP26.28■■□□□ 1.8
CTSD-212ENST00000637815 PZPP20742 1482 aa26.27■■□□□ 1.8
CTSD-212ENST00000637815 ZNF777Q9ULD5 760 aaPredicted RBP26.26■■□□□ 1.79
CTSD-212ENST00000637815 ANKRD30AQ9BXX3 1397 aa26.26■■□□□ 1.79
CTSD-212ENST00000637815 HIRIP3Q9BW71 556 aaPredicted RBP26.25■■□□□ 1.79
CTSD-212ENST00000637815 ARHGEF5Q12774 1597 aa26.24■■□□□ 1.79
CTSD-212ENST00000637815 PREX2Q70Z35 1606 aa26.24■■□□□ 1.79
CTSD-212ENST00000637815 CDC42BPBQ9Y5S2 1711 aa26.23■■□□□ 1.79
CTSD-212ENST00000637815 TEX14Q8IWB6 1497 aa26.22■■□□□ 1.79
CTSD-212ENST00000637815 FOXD1Q16676 465 aa26.21■■□□□ 1.79
CTSD-212ENST00000637815 SLC4A1APQ9BWU0 796 aaKnown RBP26.21■■□□□ 1.79
CTSD-212ENST00000637815 C9orf84Q5VXU9 1444 aa26.19■■□□□ 1.78
CTSD-212ENST00000637815 L3MBTL2Q969R5 705 aa26.17■■□□□ 1.78
CTSD-212ENST00000637815 ERCC6L2Q5T890 1561 aa26.17■■□□□ 1.78
CTSD-212ENST00000637815 ABCC2Q92887 1545 aa26.17■■□□□ 1.78
CTSD-212ENST00000637815 ANKRD50Q9ULJ7 1429 aa26.17■■□□□ 1.78
CTSD-212ENST00000637815 SAMD9LQ8IVG5 1584 aa26.16■■□□□ 1.78
CTSD-212ENST00000637815 CLASP1Q7Z460 1538 aa26.15■■□□□ 1.78
CTSD-212ENST00000637815 MBD5Q9P267 1494 aa26.14■■□□□ 1.78
CTSD-212ENST00000637815 KIAA1107Q9UPP5 1409 aa26.13■■□□□ 1.77
CTSD-212ENST00000637815 KDM5DQ9BY66 1539 aa26.12■■□□□ 1.77
CTSD-212ENST00000637815 TTC37Q6PGP7 1564 aa26.11■■□□□ 1.77
CTSD-212ENST00000637815 KCNH8Q96L42 1107 aa26.1■■□□□ 1.77
CTSD-212ENST00000637815 CCDC141Q6ZP82 1450 aa26.09■■□□□ 1.77
CTSD-212ENST00000637815 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.08■■□□□ 1.775e-7■■■■□ 21.6
CTSD-212ENST00000637815 MYO5CQ9NQX4 1742 aa26.08■■□□□ 1.76
CTSD-212ENST00000637815 CCER2I3L3R5 266 aa26.07■■□□□ 1.76
CTSD-212ENST00000637815 HSPA5P11021 654 aaKnown RBP26.07■■□□□ 1.76
CTSD-212ENST00000637815 TSPY4P0CV99 314 aa26.06■■□□□ 1.76
CTSD-212ENST00000637815 TSPY10P0CW01 314 aa26.06■■□□□ 1.76
CTSD-212ENST00000637815 ANP32CO43423 234 aa26.05■■□□□ 1.76
CTSD-212ENST00000637815 EIF4G2P78344 907 aaKnown RBP eCLIP26.05■■□□□ 1.76
CTSD-212ENST00000637815 MAST1Q9Y2H9 1570 aa26.04■■□□□ 1.76
CTSD-212ENST00000637815 POLR1AO95602 1720 aaPredicted RBP26.03■■□□□ 1.76
CTSD-212ENST00000637815 KIF15Q9NS87 1388 aa26.03■■□□□ 1.76
CTSD-212ENST00000637815 HNRNPMP52272 730 aaKnown RBP eCLIP26.02■■□□□ 1.76
CTSD-212ENST00000637815 RSPH4AQ5TD94 716 aa26.02■■□□□ 1.76
CTSD-212ENST00000637815 UHRF1BP1LA0JNW5 1464 aa26.02■■□□□ 1.76
CTSD-212ENST00000637815 NBPF8Q3BBV2 869 aa26.01■■□□□ 1.75
CTSD-212ENST00000637815 ZCCHC11Q5TAX3 1644 aaKnown RBP26.01■■□□□ 1.75
CTSD-212ENST00000637815 ARHGAP5Q13017 1502 aa26■■□□□ 1.75
CTSD-212ENST00000637815 SYCP2Q9BX26 1530 aa26■■□□□ 1.75
CTSD-212ENST00000637815 WASHC2AQ641Q2 1341 aa26■■□□□ 1.75
CTSD-212ENST00000637815 PKD2Q13563 968 aa26■■□□□ 1.75
CTSD-212ENST00000637815 NUP155O75694 1391 aa25.98■■□□□ 1.75
CTSD-212ENST00000637815 SPATA31E1Q6ZUB1 1445 aa25.96■■□□□ 1.75
CTSD-212ENST00000637815 PLEKHH2Q8IVE3 1493 aa25.96■■□□□ 1.75
CTSD-212ENST00000637815 PLXNC1O60486 1568 aa25.94■■□□□ 1.74
CTSD-212ENST00000637815 UNC13BO14795 1591 aa25.91■■□□□ 1.74
CTSD-212ENST00000637815 ARHGEF12Q9NZN5 1544 aa25.9■■□□□ 1.74
CTSD-212ENST00000637815 CNTLNQ9NXG0 1405 aa25.89■■□□□ 1.74
CTSD-212ENST00000637815 CCDC7Q96M83 1385 aa25.89■■□□□ 1.73
CTSD-212ENST00000637815 FAM135AQ9P2D6 1515 aa25.88■■□□□ 1.73
CTSD-212ENST00000637815 UHRF1BP1Q6BDS2 1440 aa25.86■■□□□ 1.73
CTSD-212ENST00000637815 PLCH2O75038 1416 aa25.86■■□□□ 1.73
CTSD-212ENST00000637815 PELP1Q8IZL8 1130 aaKnown RBP25.85■■□□□ 1.73
CTSD-212ENST00000637815 C11orf95C9JLR9 678 aaPredicted RBP25.83■■□□□ 1.73
CTSD-212ENST00000637815 KDM5CP41229 1560 aa25.81■■□□□ 1.72
CTSD-212ENST00000637815 ABCC1P33527 1531 aa25.81■■□□□ 1.72
CTSD-212ENST00000637815 IQGAP3Q86VI3 1631 aa25.81■■□□□ 1.72
CTSD-212ENST00000637815 RALGAPBQ86X10 1494 aa25.8■■□□□ 1.72
CTSD-212ENST00000637815 ARAP3Q8WWN8 1544 aa25.79■■□□□ 1.72
CTSD-212ENST00000637815 DUOX2Q9NRD8 1548 aa25.79■■□□□ 1.72
CTSD-212ENST00000637815 MAGI2Q86UL8 1455 aa25.76■■□□□ 1.71
CTSD-212ENST00000637815 BCORL1Q5H9F3 1711 aa25.75■■□□□ 1.71
CTSD-212ENST00000637815 KIF7Q2M1P5 1343 aa25.75■■□□□ 1.71
CTSD-212ENST00000637815 USP47Q96K76 1375 aa25.75■■□□□ 1.71
CTSD-212ENST00000637815 ERBINQ96RT1 1412 aa25.75■■□□□ 1.71
CTSD-212ENST00000637815 EFCAB2Q5VUJ9 269 aa25.74■■□□□ 1.71
CTSD-212ENST00000637815 SUPT16HQ9Y5B9 1047 aaKnown RBP25.74■■□□□ 1.71
CTSD-212ENST00000637815 WDR7Q9Y4E6 1490 aa25.68■■□□□ 1.7
CTSD-212ENST00000637815 ZNF326Q5BKZ1 582 aaKnown RBP25.68■■□□□ 1.7
CTSD-212ENST00000637815 PLA2R1Q13018 1463 aa25.67■■□□□ 1.7
CTSD-212ENST00000637815 CCDC144AA2RUR9 1427 aa25.67■■□□□ 1.7
CTSD-212ENST00000637815 TRAPPC8Q9Y2L5 1435 aa25.67■■□□□ 1.7
CTSD-212ENST00000637815 ARID4BQ4LE39 1312 aaPredicted RBP25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms