RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 TPM3P06753 285 aa22.64■■□□□ 1.22
CACNA1A-247ENST00000637769 KAT6BQ8WYB5 2073 aa22.63■■□□□ 1.21
CACNA1A-247ENST00000637769 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
CACNA1A-247ENST00000637769 TMF1P82094 1093 aa22.63■■□□□ 1.21
CACNA1A-247ENST00000637769 CCDC70Q6NSX1 233 aa22.62■■□□□ 1.21
CACNA1A-247ENST00000637769 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
CACNA1A-247ENST00000637769 CALRP27797 417 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-247ENST00000637769 GPS2Q13227 327 aa22.61■■□□□ 1.21
CACNA1A-247ENST00000637769 U2SURPO15042 1029 aaKnown RBP22.6■■□□□ 1.21
CACNA1A-247ENST00000637769 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
CACNA1A-247ENST00000637769 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
CACNA1A-247ENST00000637769 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-247ENST00000637769 TSR1Q2NL82 804 aaKnown RBP22.58■■□□□ 1.21
CACNA1A-247ENST00000637769 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
CACNA1A-247ENST00000637769 LMOD2Q6P5Q4 547 aa22.56■■□□□ 1.2
CACNA1A-247ENST00000637769 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
CACNA1A-247ENST00000637769 RWDD1Q9H446 243 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-247ENST00000637769 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
CACNA1A-247ENST00000637769 HIRIP3Q9BW71 556 aaPredicted RBP22.53■■□□□ 1.2
CACNA1A-247ENST00000637769 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
CACNA1A-247ENST00000637769 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.2
CACNA1A-247ENST00000637769 TIMELESSQ9UNS1 1208 aa22.51■■□□□ 1.19
CACNA1A-247ENST00000637769 TPM1P09493 284 aa22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 HMMRO75330 724 aa22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 KTN1Q86UP2 1357 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 SPAG9O60271 1321 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
CACNA1A-247ENST00000637769 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-247ENST00000637769 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 RASSF8Q8NHQ8 419 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 TPM2P07951 284 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 ATP6V1DQ9Y5K8 247 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
CACNA1A-247ENST00000637769 ST18O60284 1047 aa22.45■■□□□ 1.18
CACNA1A-247ENST00000637769 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
CACNA1A-247ENST00000637769 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
CACNA1A-247ENST00000637769 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 CC2D1BQ5T0F9 858 aaKnown RBP22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 GORABQ5T7V8 394 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 PHLDB1Q86UU1 1377 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
CACNA1A-247ENST00000637769 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
CACNA1A-247ENST00000637769 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
CACNA1A-247ENST00000637769 RRP12Q5JTH9 1297 aaKnown RBP22.39■■□□□ 1.18
CACNA1A-247ENST00000637769 HSP90AA2PQ14568 343 aaPredicted RBP22.39■■□□□ 1.17
CACNA1A-247ENST00000637769 TEX35Q5T0J7 233 aa22.39■■□□□ 1.17
CACNA1A-247ENST00000637769 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-247ENST00000637769 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-247ENST00000637769 LRRFIP1Q32MZ4 808 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-247ENST00000637769 STK31Q9BXU1 1019 aa22.37■■□□□ 1.17
CACNA1A-247ENST00000637769 GOLGA6L19H0YKK7 550 aa22.37■■□□□ 1.17
CACNA1A-247ENST00000637769 IPO7O95373 1038 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-247ENST00000637769 TPD52L1Q16890 204 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-247ENST00000637769 SKOR2Q2VWA4 1001 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-247ENST00000637769 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
CACNA1A-247ENST00000637769 CCNB3Q8WWL7 1395 aa22.35■■□□□ 1.17
CACNA1A-247ENST00000637769 RALBP1Q15311 655 aa22.35■■□□□ 1.17
CACNA1A-247ENST00000637769 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
CACNA1A-247ENST00000637769 CDR1P51861 262 aa22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 NOM1Q5C9Z4 860 aaKnown RBP22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 TAF7LQ5H9L4 462 aa22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 HOOK1Q9UJC3 728 aaKnown RBP22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 GZF1Q9H116 711 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 ANKRD20A12PQ8NF67 263 aa22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 SF3A1Q15459 793 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-247ENST00000637769 TRIM6-TRIM34B2RNG4 842 aa22.31■■□□□ 1.16
CACNA1A-247ENST00000637769 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
CACNA1A-247ENST00000637769 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
CACNA1A-247ENST00000637769 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
CACNA1A-247ENST00000637769 MARCH6O60337 910 aa22.27■■□□□ 1.16
CACNA1A-247ENST00000637769 G3V3G9 751 aa22.27■■□□□ 1.15
CACNA1A-247ENST00000637769 DCAF8Q5TAQ9 597 aa22.27■■□□□ 1.15
CACNA1A-247ENST00000637769 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-247ENST00000637769 H3BQV1 296 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 IFFO2Q5TF58 517 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 TCEAL9Q9UHQ7 104 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 SLKQ9H2G2 1235 aaPredicted RBP22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 CREBRFQ8IUR6 639 aa22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 KRI1Q8N9T8 703 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 ACBD3Q9H3P7 528 aa22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 PES1O00541 588 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 AKAP17AQ02040 695 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 IPO9Q96P70 1041 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 BECN2A8MW95 431 aa22.22■■□□□ 1.15
CACNA1A-247ENST00000637769 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
CACNA1A-247ENST00000637769 AK7Q96M32 723 aa22.22■■□□□ 1.15
CACNA1A-247ENST00000637769 RDXP35241 583 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 ARID3AQ99856 593 aa22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 CCDC47Q96A33 483 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
CACNA1A-247ENST00000637769 VPS53Q5VIR6 699 aa22.2■■□□□ 1.14
CACNA1A-247ENST00000637769 CHMP3Q9Y3E7 222 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms