RNA–Protein interactions for RNA: ENST00000637769.1

CACNA1A-247, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-247ENST00000637769 TPM3P06753 285 aa22.64■■□□□ 1.22
CACNA1A-247ENST00000637769 KAT6BQ8WYB5 2073 aa22.63■■□□□ 1.21
CACNA1A-247ENST00000637769 NEUROD2Q15784 382 aa22.63■■□□□ 1.21
CACNA1A-247ENST00000637769 TMF1P82094 1093 aa22.63■■□□□ 1.21
CACNA1A-247ENST00000637769 CCDC70Q6NSX1 233 aa22.62■■□□□ 1.21
CACNA1A-247ENST00000637769 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
CACNA1A-247ENST00000637769 CALRP27797 417 aaKnown RBP22.62■■□□□ 1.21
CACNA1A-247ENST00000637769 GPS2Q13227 327 aa22.61■■□□□ 1.21
CACNA1A-247ENST00000637769 U2SURPO15042 1029 aaKnown RBP22.6■■□□□ 1.21
CACNA1A-247ENST00000637769 RGL3Q3MIN7 710 aa22.6■■□□□ 1.21
CACNA1A-247ENST00000637769 FHAD1B1AJZ9 1412 aa22.59■■□□□ 1.21
CACNA1A-247ENST00000637769 CFDP1Q9UEE9 299 aaPredicted RBP22.59■■□□□ 1.21
CACNA1A-247ENST00000637769 TSR1Q2NL82 804 aaKnown RBP22.58■■□□□ 1.21
CACNA1A-247ENST00000637769 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
CACNA1A-247ENST00000637769 LMOD2Q6P5Q4 547 aa22.56■■□□□ 1.2
CACNA1A-247ENST00000637769 RB1CC1Q8TDY2 1594 aa22.54■■□□□ 1.2
CACNA1A-247ENST00000637769 RWDD1Q9H446 243 aaPredicted RBP22.54■■□□□ 1.2
CACNA1A-247ENST00000637769 CEP164Q9UPV0 1460 aa22.53■■□□□ 1.2
CACNA1A-247ENST00000637769 HIRIP3Q9BW71 556 aaPredicted RBP22.53■■□□□ 1.2
CACNA1A-247ENST00000637769 TCERG1O14776 1098 aaKnown RBP22.52■■□□□ 1.2
CACNA1A-247ENST00000637769 GOLGA6L3A6NEY3 463 aa22.52■■□□□ 1.2
CACNA1A-247ENST00000637769 TIMELESSQ9UNS1 1208 aa22.51■■□□□ 1.19
CACNA1A-247ENST00000637769 TPM1P09493 284 aa22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 CEP162Q5TB80 1403 aa22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 HMMRO75330 724 aa22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 KTN1Q86UP2 1357 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 SPAG9O60271 1321 aaKnown RBP22.5■■□□□ 1.19
CACNA1A-247ENST00000637769 PMFBP1Q8TBY8 1022 aa22.49■■□□□ 1.19
CACNA1A-247ENST00000637769 EIF3AQ14152 1382 aaKnown RBP22.49■■□□□ 1.19
CACNA1A-247ENST00000637769 KIF27Q86VH2 1401 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 RASSF8Q8NHQ8 419 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 TPM2P07951 284 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 ATP6V1DQ9Y5K8 247 aa22.48■■□□□ 1.19
CACNA1A-247ENST00000637769 CCER2I3L3R5 266 aa22.47■■□□□ 1.19
CACNA1A-247ENST00000637769 ST18O60284 1047 aa22.45■■□□□ 1.18
CACNA1A-247ENST00000637769 KCNH8Q96L42 1107 aa22.45■■□□□ 1.18
CACNA1A-247ENST00000637769 DDX11L8A8MPP1 907 aa22.45■■□□□ 1.18
CACNA1A-247ENST00000637769 KIF16BQ96L93 1317 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 CC2D1BQ5T0F9 858 aaKnown RBP22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 GORABQ5T7V8 394 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 RSPH6AQ9H0K4 717 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 PHLDB1Q86UU1 1377 aa22.43■■□□□ 1.18
CACNA1A-247ENST00000637769 MORC1Q86VD1 984 aa22.42■■□□□ 1.18
CACNA1A-247ENST00000637769 B4GALNT3Q6L9W6 998 aa22.42■■□□□ 1.18
CACNA1A-247ENST00000637769 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
CACNA1A-247ENST00000637769 RRP12Q5JTH9 1297 aaKnown RBP22.39■■□□□ 1.18
CACNA1A-247ENST00000637769 HSP90AA2PQ14568 343 aaPredicted RBP22.39■■□□□ 1.17
CACNA1A-247ENST00000637769 TEX35Q5T0J7 233 aa22.39■■□□□ 1.17
CACNA1A-247ENST00000637769 HDGFL2Q7Z4V5 671 aaPredicted RBP22.38■■□□□ 1.17
CACNA1A-247ENST00000637769 SRPK2P78362 688 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-247ENST00000637769 LRRFIP1Q32MZ4 808 aaKnown RBP22.38■■□□□ 1.17
CACNA1A-247ENST00000637769 STK31Q9BXU1 1019 aa22.37■■□□□ 1.17
CACNA1A-247ENST00000637769 GOLGA6L19H0YKK7 550 aa22.37■■□□□ 1.17
CACNA1A-247ENST00000637769 IPO7O95373 1038 aaKnown RBP22.36■■□□□ 1.17
CACNA1A-247ENST00000637769 TPD52L1Q16890 204 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-247ENST00000637769 SKOR2Q2VWA4 1001 aaPredicted RBP22.36■■□□□ 1.17
CACNA1A-247ENST00000637769 SPRYD3Q8NCJ5 442 aa22.35■■□□□ 1.17
CACNA1A-247ENST00000637769 CCNB3Q8WWL7 1395 aa22.35■■□□□ 1.17
CACNA1A-247ENST00000637769 RALBP1Q15311 655 aa22.35■■□□□ 1.17
CACNA1A-247ENST00000637769 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
CACNA1A-247ENST00000637769 CDR1P51861 262 aa22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 NOM1Q5C9Z4 860 aaKnown RBP22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 TAF7LQ5H9L4 462 aa22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 HOOK1Q9UJC3 728 aaKnown RBP22.33■■□□□ 1.16
CACNA1A-247ENST00000637769 ITPRIPQ8IWB1 547 aa22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 GZF1Q9H116 711 aaPredicted RBP22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 ANKRD20A12PQ8NF67 263 aa22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
CACNA1A-247ENST00000637769 SF3A1Q15459 793 aaKnown RBP22.31■■□□□ 1.16
CACNA1A-247ENST00000637769 TRIM6-TRIM34B2RNG4 842 aa22.31■■□□□ 1.16
CACNA1A-247ENST00000637769 RCAN3Q9UKA8 241 aa22.29■■□□□ 1.16
CACNA1A-247ENST00000637769 ANO8Q9HCE9 1232 aaPredicted RBP22.29■■□□□ 1.16
CACNA1A-247ENST00000637769 ARHGAP35Q9NRY4 1499 aa22.28■■□□□ 1.16
CACNA1A-247ENST00000637769 MARCH6O60337 910 aa22.27■■□□□ 1.16
CACNA1A-247ENST00000637769 G3V3G9 751 aa22.27■■□□□ 1.15
CACNA1A-247ENST00000637769 DCAF8Q5TAQ9 597 aa22.27■■□□□ 1.15
CACNA1A-247ENST00000637769 RBM19Q9Y4C8 960 aaKnown RBP22.26■■□□□ 1.15
CACNA1A-247ENST00000637769 H3BQV1 296 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 IFFO2Q5TF58 517 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 TCEAL9Q9UHQ7 104 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 BAZ1BQ9UIG0 1483 aaKnown RBP22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 DCAF11Q8TEB1 546 aa22.25■■□□□ 1.15
CACNA1A-247ENST00000637769 SLKQ9H2G2 1235 aaPredicted RBP22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 CREBRFQ8IUR6 639 aa22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 KRI1Q8N9T8 703 aaKnown RBP22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 ACBD3Q9H3P7 528 aa22.24■■□□□ 1.15
CACNA1A-247ENST00000637769 PES1O00541 588 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 AKAP17AQ02040 695 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 IPO9Q96P70 1041 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 ROCK2O75116 1388 aaKnown RBP22.23■■□□□ 1.15
CACNA1A-247ENST00000637769 BECN2A8MW95 431 aa22.22■■□□□ 1.15
CACNA1A-247ENST00000637769 TNIKQ9UKE5 1360 aa22.22■■□□□ 1.15
CACNA1A-247ENST00000637769 AK7Q96M32 723 aa22.22■■□□□ 1.15
CACNA1A-247ENST00000637769 RDXP35241 583 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 ERCC6Q03468 1493 aa22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 ARID3AQ99856 593 aa22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 CCDC47Q96A33 483 aaKnown RBP22.21■■□□□ 1.15
CACNA1A-247ENST00000637769 WRNQ14191 1432 aaPredicted RBP eCLIP22.2■■□□□ 1.14
CACNA1A-247ENST00000637769 VPS53Q5VIR6 699 aa22.2■■□□□ 1.14
CACNA1A-247ENST00000637769 CHMP3Q9Y3E7 222 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms