RNA–Protein interactions for RNA: ENST00000636143.1

MEF2C-238, Transcript of myocyte enhancer factor 2C, human

TSL 5

Gene MEF2C, Length 2,247 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MEF2C-238	ENST00000636143	CNGB1	Q14028	1251 aa	Predicted RBP	13.91	□□□□□ -0.18
MEF2C-238	ENST00000636143	KANK4	Q5T7N3	995 aa	Predicted RBP	13.91	□□□□□ -0.18
MEF2C-238	ENST00000636143	AEBP2	Q6ZN18	517 aa	Predicted RBP	13.91	□□□□□ -0.18
MEF2C-238	ENST00000636143	CHMP4B	Q9H444	224 aa	Known RBP	13.91	□□□□□ -0.18
MEF2C-238	ENST00000636143	ESPN	B1AK53	854 aa		13.9	□□□□□ -0.18
MEF2C-238	ENST00000636143	TERF1	P54274	439 aa		13.9	□□□□□ -0.18
MEF2C-238	ENST00000636143	SYNJ1	O43426	1573 aa		13.89	□□□□□ -0.19
MEF2C-238	ENST00000636143	GOLGA6L3	A6NEY3	463 aa		13.88	□□□□□ -0.19
MEF2C-238	ENST00000636143	CECR2	Q9BXF3	1484 aa		13.87	□□□□□ -0.19
MEF2C-238	ENST00000636143	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	13.86	□□□□□ -0.19
MEF2C-238	ENST00000636143	ARX	Q96QS3	562 aa		13.86	□□□□□ -0.19
MEF2C-238	ENST00000636143	ARAP1	Q96P48	1450 aa		13.85	□□□□□ -0.19
MEF2C-238	ENST00000636143	NCBP3	Q53F19	620 aa	Known RBP	13.85	□□□□□ -0.19
MEF2C-238	ENST00000636143	TONSL	Q96HA7	1378 aa		13.85	□□□□□ -0.19
MEF2C-238	ENST00000636143	ERICH3	Q5RHP9	1530 aa		13.85	□□□□□ -0.19
MEF2C-238	ENST00000636143	RRP1	P56182	461 aa	Known RBP	13.84	□□□□□ -0.19
MEF2C-238	ENST00000636143	MTERF4	Q7Z6M4	381 aa	Known RBP	13.84	□□□□□ -0.19
MEF2C-238	ENST00000636143	EXOC6	Q8TAG9	804 aa		13.84	□□□□□ -0.19
MEF2C-238	ENST00000636143	DMTN	Q08495	405 aa		13.84	□□□□□ -0.19
MEF2C-238	ENST00000636143	KIAA1211	Q6ZU35	1233 aa		13.83	□□□□□ -0.2
MEF2C-238	ENST00000636143	ERBB4	Q15303	1308 aa		13.82	□□□□□ -0.2
MEF2C-238	ENST00000636143	MRE11	P49959	708 aa		13.82	□□□□□ -0.2
MEF2C-238	ENST00000636143	RIPK4	P57078	832 aa		13.82	□□□□□ -0.2
MEF2C-238	ENST00000636143	PANK2	Q9BZ23	570 aa		13.82	□□□□□ -0.2
MEF2C-238	ENST00000636143	RAPGEF2	Q9Y4G8	1499 aa		13.81	□□□□□ -0.2
MEF2C-238	ENST00000636143	TMEM51	Q9NW97	253 aa		13.8	□□□□□ -0.2
MEF2C-238	ENST00000636143	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.8	□□□□□ -0.2
MEF2C-238	ENST00000636143	ISY1	Q9ULR0	285 aa	Known RBP	13.8	□□□□□ -0.2
MEF2C-238	ENST00000636143	ARID4B	Q4LE39	1312 aa	Predicted RBP	13.8	□□□□□ -0.2
MEF2C-238	ENST00000636143	KDM5B	Q9UGL1	1544 aa		13.79	□□□□□ -0.2
MEF2C-238	ENST00000636143	ABCA5	Q8WWZ7	1642 aa		13.79	□□□□□ -0.2
MEF2C-238	ENST00000636143	FAM161A	Q3B820	660 aa		13.78	□□□□□ -0.2
MEF2C-238	ENST00000636143	MYH16	Q9H6N6	1097 aa		13.78	□□□□□ -0.2
MEF2C-238	ENST00000636143	OFD1	O75665	1012 aa		13.77	□□□□□ -0.21
MEF2C-238	ENST00000636143	PPP4R3B	Q5MIZ7	849 aa		13.77	□□□□□ -0.21
MEF2C-238	ENST00000636143	TOP2A	P11388	1531 aa	Known RBP	13.76	□□□□□ -0.21
MEF2C-238	ENST00000636143	KIF20A	O95235	890 aa		13.76	□□□□□ -0.21
MEF2C-238	ENST00000636143	MAP3K1	Q13233	1512 aa		13.76	□□□□□ -0.21
MEF2C-238	ENST00000636143	FTSJ3	Q8IY81	847 aa	Known RBP	13.76	□□□□□ -0.21
MEF2C-238	ENST00000636143	NCOA1	Q15788	1441 aa		13.76	□□□□□ -0.21
MEF2C-238	ENST00000636143	HSPA5	P11021	654 aa	Known RBP	13.75	□□□□□ -0.21
MEF2C-238	ENST00000636143	C8orf34	Q49A92	452 aa		13.75	□□□□□ -0.21
MEF2C-238	ENST00000636143	DNAJC5B	Q9UF47	199 aa		13.75	□□□□□ -0.21
MEF2C-238	ENST00000636143	PDZRN4	Q6ZMN7	1036 aa	Predicted RBP	13.74	□□□□□ -0.21
MEF2C-238	ENST00000636143	CCDC7	Q96M83	1385 aa		13.74	□□□□□ -0.21
MEF2C-238	ENST00000636143	TNNT2	P45379	298 aa	Predicted RBP	13.74	□□□□□ -0.21
MEF2C-238	ENST00000636143	ZSCAN20	P17040	1043 aa	Predicted RBP	13.73	□□□□□ -0.21
MEF2C-238	ENST00000636143	TRIM44	Q96DX7	344 aa	Predicted RBP	13.73	□□□□□ -0.21
MEF2C-238	ENST00000636143	KTN1	Q86UP2	1357 aa	Known RBP	13.73	□□□□□ -0.21
MEF2C-238	ENST00000636143	VGF	O15240	615 aa	Predicted RBP	13.72	□□□□□ -0.21
MEF2C-238	ENST00000636143	GTPBP4	Q9BZE4	634 aa	Known RBP	13.72	□□□□□ -0.21
MEF2C-238	ENST00000636143	BRD2	P25440	801 aa	Known RBP	13.72	□□□□□ -0.21
MEF2C-238	ENST00000636143	ZNF830	Q96NB3	372 aa	Predicted RBP	13.72	□□□□□ -0.21
MEF2C-238	ENST00000636143	CHRM1	P11229	460 aa	Predicted RBP	13.71	□□□□□ -0.21
MEF2C-238	ENST00000636143	GRPEL1	Q9HAV7	217 aa		13.71	□□□□□ -0.21
MEF2C-238	ENST00000636143	POLR1A	O95602	1720 aa	Predicted RBP	13.71	□□□□□ -0.21
MEF2C-238	ENST00000636143	PHLDB1	Q86UU1	1377 aa		13.71	□□□□□ -0.21
MEF2C-238	ENST00000636143	TAF3	Q5VWG9	929 aa		13.71	□□□□□ -0.22
MEF2C-238	ENST00000636143	ANTXR1	Q9H6X2	564 aa		13.71	□□□□□ -0.22
MEF2C-238	ENST00000636143	FAM13B	Q9NYF5	915 aa		13.71	□□□□□ -0.22
MEF2C-238	ENST00000636143	VIRMA	Q69YN4	1812 aa	Known RBP	13.7	□□□□□ -0.22
MEF2C-238	ENST00000636143	TEX2	Q8IWB9	1127 aa		13.7	□□□□□ -0.22
MEF2C-238	ENST00000636143	LETM1	O95202	739 aa	Predicted RBP	13.7	□□□□□ -0.22
MEF2C-238	ENST00000636143	BECN1	Q14457	450 aa		13.7	□□□□□ -0.22
MEF2C-238	ENST00000636143	RCAN3	Q9UKA8	241 aa		13.7	□□□□□ -0.22
MEF2C-238	ENST00000636143	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.69	□□□□□ -0.22
MEF2C-238	ENST00000636143	MYOM3	Q5VTT5	1437 aa		13.69	□□□□□ -0.22
MEF2C-238	ENST00000636143	KDM2B	Q8NHM5	1336 aa		13.69	□□□□□ -0.22
MEF2C-238	ENST00000636143	CCDC94	Q9BW85	323 aa	Predicted RBP	13.68	□□□□□ -0.22
MEF2C-238	ENST00000636143	DYNC1I1	O14576	645 aa		13.67	□□□□□ -0.22
MEF2C-238	ENST00000636143	ANP32B	Q92688	251 aa	Known RBP	13.67	□□□□□ -0.22
MEF2C-238	ENST00000636143	PRDM10	Q9NQV6	1147 aa		13.67	□□□□□ -0.22
MEF2C-238	ENST00000636143	ZSCAN30	Q86W11	494 aa		13.66	□□□□□ -0.22
MEF2C-238	ENST00000636143	ZFP91	Q96JP5	570 aa	Predicted RBP	13.66	□□□□□ -0.22
MEF2C-238	ENST00000636143	MCM4	P33991	863 aa		13.66	□□□□□ -0.22
MEF2C-238	ENST00000636143	FOXD1	Q16676	465 aa		13.65	□□□□□ -0.22
MEF2C-238	ENST00000636143	CENPQ	Q7L2Z9	268 aa	Predicted RBP	13.65	□□□□□ -0.22
MEF2C-238	ENST00000636143	SKAP1	Q86WV1	359 aa		13.64	□□□□□ -0.23
MEF2C-238	ENST00000636143	USP19	O94966	1318 aa		13.63	□□□□□ -0.23
MEF2C-238	ENST00000636143	TRAK2	O60296	914 aa		13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	PDE3B	Q13370	1112 aa		13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	PNISR	Q8TF01	805 aa	Known RBP	13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	PPP1R9B	Q96SB3	815 aa		13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	LRPPRC	P42704	1394 aa	Known RBP	13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	UACA	Q9BZF9	1416 aa		13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	TIAM1	Q13009	1591 aa		13.62	□□□□□ -0.23
MEF2C-238	ENST00000636143	CCDC173	Q0VFZ6	552 aa		13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	PLCD3	Q8N3E9	789 aa		13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	GZF1	Q9H116	711 aa	Predicted RBP	13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	UQCRHL	A0A096LP55	91 aa		13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	UQCRH	P07919	91 aa		13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	SLK	Q9H2G2	1235 aa	Predicted RBP	13.6	□□□□□ -0.23
MEF2C-238	ENST00000636143	VGLL3	A8MV65	326 aa		13.59	□□□□□ -0.23
MEF2C-238	ENST00000636143	DHX29	Q7Z478	1369 aa	Known RBP	13.59	□□□□□ -0.23
MEF2C-238	ENST00000636143	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.58	□□□□□ -0.24
MEF2C-238	ENST00000636143	MSN	P26038	577 aa	Known RBP	13.58	□□□□□ -0.24
MEF2C-238	ENST00000636143	HS1BP3	Q53T59	392 aa		13.58	□□□□□ -0.24
MEF2C-238	ENST00000636143	CRBN	Q96SW2	442 aa		13.58	□□□□□ -0.24
MEF2C-238	ENST00000636143	ZNF500	O60304	480 aa	Predicted RBP	13.57	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms