RNA–Protein interactions for RNA: ENST00000636012.1

CACNA1A-221, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-221ENST00000636012 DCAF11Q8TEB1 546 aa20.36■□□□□ 0.85
CACNA1A-221ENST00000636012 KIAA2012Q0VF49 1180 aa20.35■□□□□ 0.85
CACNA1A-221ENST00000636012 HSCBQ8IWL3 235 aa20.35■□□□□ 0.85
CACNA1A-221ENST00000636012 CSB-PGBD3P0DP91 1061 aa20.34■□□□□ 0.85
CACNA1A-221ENST00000636012 RB1CC1Q8TDY2 1594 aa20.33■□□□□ 0.84
CACNA1A-221ENST00000636012 CHAF1AQ13111 956 aaPredicted RBP20.32■□□□□ 0.84
CACNA1A-221ENST00000636012 TMF1P82094 1093 aa20.32■□□□□ 0.84
CACNA1A-221ENST00000636012 GOLGA3Q08378 1498 aa20.31■□□□□ 0.84
CACNA1A-221ENST00000636012 TNNT3P45378 269 aaPredicted RBP20.31■□□□□ 0.84
CACNA1A-221ENST00000636012 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
CACNA1A-221ENST00000636012 G3V3G9 751 aa20.3■□□□□ 0.84
CACNA1A-221ENST00000636012 DCAF8Q5TAQ9 597 aa20.3■□□□□ 0.84
CACNA1A-221ENST00000636012 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
CACNA1A-221ENST00000636012 KIAA1211Q6ZU35 1233 aa20.29■□□□□ 0.84
CACNA1A-221ENST00000636012 CREBRFQ8IUR6 639 aa20.28■□□□□ 0.84
CACNA1A-221ENST00000636012 SIN3AQ96ST3 1273 aa20.28■□□□□ 0.84
CACNA1A-221ENST00000636012 B4GALNT3Q6L9W6 998 aa20.28■□□□□ 0.84
CACNA1A-221ENST00000636012 GGT6Q6P531 493 aa20.27■□□□□ 0.84
CACNA1A-221ENST00000636012 MSNP26038 577 aaKnown RBP20.25■□□□□ 0.83
CACNA1A-221ENST00000636012 CEP162Q5TB80 1403 aa20.24■□□□□ 0.83
CACNA1A-221ENST00000636012 BAZ1BQ9UIG0 1483 aaKnown RBP20.23■□□□□ 0.83
CACNA1A-221ENST00000636012 TAF7LQ5H9L4 462 aa20.23■□□□□ 0.83
CACNA1A-221ENST00000636012 GORABQ5T7V8 394 aa20.22■□□□□ 0.83
CACNA1A-221ENST00000636012 PPP4R2Q9NY27 417 aa20.22■□□□□ 0.83
CACNA1A-221ENST00000636012 NOP58Q9Y2X3 529 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-221ENST00000636012 CCNB3Q8WWL7 1395 aa20.21■□□□□ 0.83
CACNA1A-221ENST00000636012 L1TD1Q5T7N2 865 aaKnown RBP20.21■□□□□ 0.83
CACNA1A-221ENST00000636012 CCDC180Q9P1Z9 1646 aa20.2■□□□□ 0.82
CACNA1A-221ENST00000636012 HDGFL2Q7Z4V5 671 aaPredicted RBP20.2■□□□□ 0.82
CACNA1A-221ENST00000636012 KIF27Q86VH2 1401 aa20.19■□□□□ 0.82
CACNA1A-221ENST00000636012 HSP90B1P14625 803 aaKnown RBP20.16■□□□□ 0.82
CACNA1A-221ENST00000636012 CALRP27797 417 aaKnown RBP20.14■□□□□ 0.81
CACNA1A-221ENST00000636012 CNKSR2Q8WXI2 1034 aa20.14■□□□□ 0.81
CACNA1A-221ENST00000636012 VPS53Q5VIR6 699 aa20.13■□□□□ 0.81
CACNA1A-221ENST00000636012 ITPRIPQ8IWB1 547 aa20.12■□□□□ 0.81
CACNA1A-221ENST00000636012 TRIM6-TRIM34B2RNG4 842 aa20.11■□□□□ 0.81
CACNA1A-221ENST00000636012 FRAT2O75474 233 aaPredicted RBP20.1■□□□□ 0.81
CACNA1A-221ENST00000636012 IPO8O15397 1037 aaKnown RBP20.1■□□□□ 0.81
CACNA1A-221ENST00000636012 U2AF1L5P0DN76 240 aaPredicted RBP20.09■□□□□ 0.81
CACNA1A-221ENST00000636012 U2AF1Q01081 240 aaKnown RBP eCLIP20.09■□□□□ 0.81
CACNA1A-221ENST00000636012 RASSF8Q8NHQ8 419 aa20.09■□□□□ 0.81
CACNA1A-221ENST00000636012 GPATCH3Q96I76 525 aa20.09■□□□□ 0.81
CACNA1A-221ENST00000636012 CFAP44Q96MT7 982 aa20.08■□□□□ 0.8
CACNA1A-221ENST00000636012 GZF1Q9H116 711 aaPredicted RBP20.08■□□□□ 0.8
CACNA1A-221ENST00000636012 FOXD1Q16676 465 aa20.07■□□□□ 0.8
CACNA1A-221ENST00000636012 WRNQ14191 1432 aaPredicted RBP eCLIP20.07■□□□□ 0.8
CACNA1A-221ENST00000636012 SPAG9O60271 1321 aaKnown RBP20.07■□□□□ 0.8
CACNA1A-221ENST00000636012 GTF2E1P29083 439 aaPredicted RBP20.06■□□□□ 0.8
CACNA1A-221ENST00000636012 SLC4A10Q6U841 1118 aa20.05■□□□□ 0.8
CACNA1A-221ENST00000636012 LTV1Q96GA3 475 aaPredicted RBP20.05■□□□□ 0.8
CACNA1A-221ENST00000636012 NUTM2DQ5VT03 806 aaPredicted RBP20.04■□□□□ 0.8
CACNA1A-221ENST00000636012 NUTM2FA1L443 756 aa20.03■□□□□ 0.8
CACNA1A-221ENST00000636012 CALD1Q05682 793 aaKnown RBP20.03■□□□□ 0.8
CACNA1A-221ENST00000636012 ROCK2O75116 1388 aaKnown RBP20.02■□□□□ 0.8
CACNA1A-221ENST00000636012 GOLGA6L1Q8N7Z2 621 aa20.02■□□□□ 0.8
CACNA1A-221ENST00000636012 TPM4P67936 248 aa20.02■□□□□ 0.8
CACNA1A-221ENST00000636012 CEP164Q9UPV0 1460 aa20.02■□□□□ 0.79
CACNA1A-221ENST00000636012 STK31Q9BXU1 1019 aa20.01■□□□□ 0.79
CACNA1A-221ENST00000636012 TOMM22Q9NS69 142 aa20.01■□□□□ 0.79
CACNA1A-221ENST00000636012 MARCH6O60337 910 aa20.01■□□□□ 0.79
CACNA1A-221ENST00000636012 MSH5O43196 834 aa20■□□□□ 0.79
CACNA1A-221ENST00000636012 NOL8Q76FK4 1167 aaKnown RBP20■□□□□ 0.79
CACNA1A-221ENST00000636012 KTN1Q86UP2 1357 aaKnown RBP20■□□□□ 0.79
CACNA1A-221ENST00000636012 NGDNQ8NEJ9 315 aaKnown RBP20■□□□□ 0.79
CACNA1A-221ENST00000636012 PTMSP20962 102 aa20■□□□□ 0.79
CACNA1A-221ENST00000636012 HTATSF1O43719 755 aaKnown RBP19.99■□□□□ 0.79
CACNA1A-221ENST00000636012 EEA1Q15075 1411 aa19.99■□□□□ 0.79
CACNA1A-221ENST00000636012 CEP89Q96ST8 783 aa19.99■□□□□ 0.79
CACNA1A-221ENST00000636012 EID1Q9Y6B2 187 aa19.97■□□□□ 0.79
CACNA1A-221ENST00000636012 GBP4Q96PP9 640 aa19.97■□□□□ 0.79
CACNA1A-221ENST00000636012 AMPHP49418 695 aa19.97■□□□□ 0.79
CACNA1A-221ENST00000636012 PES1O00541 588 aaKnown RBP19.96■□□□□ 0.79
CACNA1A-221ENST00000636012 EVA1CP58658 441 aa19.95■□□□□ 0.78
CACNA1A-221ENST00000636012 FHAD1B1AJZ9 1412 aa19.95■□□□□ 0.78
CACNA1A-221ENST00000636012 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.95■□□□□ 0.78
CACNA1A-221ENST00000636012 SLKQ9H2G2 1235 aaPredicted RBP19.95■□□□□ 0.78
CACNA1A-221ENST00000636012 MYO15BQ96JP2 1530 aa19.95■□□□□ 0.78
CACNA1A-221ENST00000636012 PKD2Q13563 968 aa19.95■□□□□ 0.78
CACNA1A-221ENST00000636012 SMC4Q9NTJ3 1288 aa19.94■□□□□ 0.78
CACNA1A-221ENST00000636012 MFAP1P55081 439 aaKnown RBP19.94■□□□□ 0.78
CACNA1A-221ENST00000636012 FOXD4L1Q9NU39 408 aa19.93■□□□□ 0.78
CACNA1A-221ENST00000636012 CCDC34Q96HJ3 373 aa19.93■□□□□ 0.78
CACNA1A-221ENST00000636012 RAD21O60216 631 aa19.92■□□□□ 0.78
CACNA1A-221ENST00000636012 SYAP1Q96A49 352 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-221ENST00000636012 RWDD1Q9H446 243 aaPredicted RBP19.92■□□□□ 0.78
CACNA1A-221ENST00000636012 CCDC146Q8IYE0 955 aa19.92■□□□□ 0.78
CACNA1A-221ENST00000636012 HSPA5P11021 654 aaKnown RBP19.9■□□□□ 0.78
CACNA1A-221ENST00000636012 ARHGAP35Q9NRY4 1499 aa19.9■□□□□ 0.78
CACNA1A-221ENST00000636012 FOXD4L5Q5VV16 416 aaPredicted RBP19.89■□□□□ 0.78
CACNA1A-221ENST00000636012 FOXD4L4Q8WXT5 416 aaPredicted RBP19.89■□□□□ 0.78
CACNA1A-221ENST00000636012 RCAN3Q9UKA8 241 aa19.89■□□□□ 0.77
CACNA1A-221ENST00000636012 CUX2O14529 1486 aa19.87■□□□□ 0.77
CACNA1A-221ENST00000636012 NGEFQ8N5V2 710 aa19.86■□□□□ 0.77
CACNA1A-221ENST00000636012 TCEAL9Q9UHQ7 104 aa19.86■□□□□ 0.77
CACNA1A-221ENST00000636012 TPD52L1Q16890 204 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-221ENST00000636012 MEX3CQ5U5Q3 659 aaKnown RBP19.86■□□□□ 0.77
CACNA1A-221ENST00000636012 SETQ01105 290 aaPredicted RBP19.86■□□□□ 0.77
CACNA1A-221ENST00000636012 SF3A1Q15459 793 aaKnown RBP19.85■□□□□ 0.77
CACNA1A-221ENST00000636012 CHMP4AQ9BY43 222 aa19.85■□□□□ 0.77
CACNA1A-221ENST00000636012 HMMRO75330 724 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms