RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 KDM2AQ9Y2K7 1162 aa5.27□□□□□ -1.57
R3HDM1-220ENST00000628915 CWC22Q9HCG8 908 aaKnown RBP5.27□□□□□ -1.57
R3HDM1-220ENST00000628915 ATAD2BQ9ULI0 1458 aa5.26□□□□□ -1.57
R3HDM1-220ENST00000628915 NEFMP07197 916 aa5.26□□□□□ -1.57
R3HDM1-220ENST00000628915 PUS7Q96PZ0 661 aaKnown RBP5.26□□□□□ -1.57
R3HDM1-220ENST00000628915 CECR2Q9BXF3 1484 aa5.25□□□□□ -1.57
R3HDM1-220ENST00000628915 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.25□□□□□ -1.57
R3HDM1-220ENST00000628915 RAD21O60216 631 aa5.25□□□□□ -1.57
R3HDM1-220ENST00000628915 TOP2AP11388 1531 aaKnown RBP5.25□□□□□ -1.57
R3HDM1-220ENST00000628915 IPO4Q8TEX9 1081 aaKnown RBP5.24□□□□□ -1.57
R3HDM1-220ENST00000628915 FAM193AP78312 1265 aa5.24□□□□□ -1.57
R3HDM1-220ENST00000628915 FTSJ3Q8IY81 847 aaKnown RBP5.23□□□□□ -1.57
R3HDM1-220ENST00000628915 ATF5Q9Y2D1 282 aaPredicted RBP5.23□□□□□ -1.57
R3HDM1-220ENST00000628915 HSP90AA2PQ14568 343 aaPredicted RBP5.23□□□□□ -1.57
R3HDM1-220ENST00000628915 TEX2Q8IWB9 1127 aa5.21□□□□□ -1.57
R3HDM1-220ENST00000628915 MIER1Q8N108 512 aa5.21□□□□□ -1.57
R3HDM1-220ENST00000628915 SECISBP2LQ93073 1101 aaKnown RBP5.21□□□□□ -1.58
R3HDM1-220ENST00000628915 CERS3Q8IU89 383 aa5.21□□□□□ -1.58
R3HDM1-220ENST00000628915 KCTD17Q8N5Z5 321 aa5.21□□□□□ -1.58
R3HDM1-220ENST00000628915 KIF21AQ7Z4S6 1674 aa5.21□□□□□ -1.58
R3HDM1-220ENST00000628915 FAM9BQ8IZU0 186 aa5.21□□□□□ -1.58
R3HDM1-220ENST00000628915 GPATCH11Q8N954 259 aa5.2□□□□□ -1.58
R3HDM1-220ENST00000628915 RBM19Q9Y4C8 960 aaKnown RBP5.2□□□□□ -1.58
R3HDM1-220ENST00000628915 TNNT2P45379 298 aaPredicted RBP5.19□□□□□ -1.58
R3HDM1-220ENST00000628915 ANAPC15P60006 121 aa5.19□□□□□ -1.58
R3HDM1-220ENST00000628915 FAM50AQ14320 339 aaKnown RBP5.19□□□□□ -1.58
R3HDM1-220ENST00000628915 ANP32BQ92688 251 aaKnown RBP5.19□□□□□ -1.58
R3HDM1-220ENST00000628915 AEBP1Q8IUX7 1158 aa5.19□□□□□ -1.58
R3HDM1-220ENST00000628915 LAS1LQ9Y4W2 734 aaKnown RBP5.18□□□□□ -1.58
R3HDM1-220ENST00000628915 TMED8Q6PL24 325 aaPredicted RBP5.18□□□□□ -1.58
R3HDM1-220ENST00000628915 FANCIQ9NVI1 1328 aa5.18□□□□□ -1.58
R3HDM1-220ENST00000628915 SETQ01105 290 aaPredicted RBP5.18□□□□□ -1.58
R3HDM1-220ENST00000628915 CLGNO14967 610 aa5.17□□□□□ -1.58
R3HDM1-220ENST00000628915 ABCC8Q09428 1581 aa5.17□□□□□ -1.58
R3HDM1-220ENST00000628915 PLCD3Q8N3E9 789 aa5.17□□□□□ -1.58
R3HDM1-220ENST00000628915 NPM1P06748 294 aaKnown RBP eCLIP5.17□□□□□ -1.58
R3HDM1-220ENST00000628915 HSP90AA1P07900 732 aaKnown RBP5.16□□□□□ -1.58
R3HDM1-220ENST00000628915 FOXD4L5Q5VV16 416 aaPredicted RBP5.16□□□□□ -1.58
R3HDM1-220ENST00000628915 FOXD4L4Q8WXT5 416 aaPredicted RBP5.16□□□□□ -1.58
R3HDM1-220ENST00000628915 ZNF428Q96B54 188 aa5.16□□□□□ -1.58
R3HDM1-220ENST00000628915 CFTRP13569 1480 aa5.16□□□□□ -1.58
R3HDM1-220ENST00000628915 MCCP23508 829 aa5.15□□□□□ -1.58
R3HDM1-220ENST00000628915 IL27Q8NEV9 243 aa5.15□□□□□ -1.59
R3HDM1-220ENST00000628915 RRP9O43818 475 aaKnown RBP5.14□□□□□ -1.59
R3HDM1-220ENST00000628915 KDM4AO75164 1064 aa5.14□□□□□ -1.59
R3HDM1-220ENST00000628915 BIVM-ERCC5R4GMW8 1640 aa5.13□□□□□ -1.59
R3HDM1-220ENST00000628915 AKT1S1Q96B36 256 aa5.13□□□□□ -1.59
R3HDM1-220ENST00000628915 IRX3P78415 501 aaPredicted RBP5.13□□□□□ -1.59
R3HDM1-220ENST00000628915 ARID3CA6NKF2 412 aa5.12□□□□□ -1.59
R3HDM1-220ENST00000628915 MRC2Q9UBG0 1479 aa5.12□□□□□ -1.59
R3HDM1-220ENST00000628915 TARBP1Q13395 1621 aaKnown RBP5.12□□□□□ -1.59
R3HDM1-220ENST00000628915 CCDC27Q2M243 656 aa5.12□□□□□ -1.59
R3HDM1-220ENST00000628915 ZNF622Q969S3 477 aaKnown RBP eCLIP5.12□□□□□ -1.592e-6■■□□□ 13.9
R3HDM1-220ENST00000628915 SPDYE2BA6NHP3 402 aa5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 SPDYE6P0CI01 402 aa5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 SPDYE2Q495Y8 402 aa5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 DNTTIP2Q5QJE6 756 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 CC2D1BQ5T0F9 858 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 FAM177A1Q8N128 213 aaPredicted RBP5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 DNAJC2Q99543 621 aaKnown RBP5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 DNMBPQ6XZF7 1577 aa5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 PRDM16Q9HAZ2 1276 aa5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 MTMR7Q9Y216 660 aa5.11□□□□□ -1.59
R3HDM1-220ENST00000628915 MROH2BQ7Z745 1585 aa5.1□□□□□ -1.59
R3HDM1-220ENST00000628915 FAM43BQ6ZT52 329 aaPredicted RBP5.1□□□□□ -1.59
R3HDM1-220ENST00000628915 HDAC5Q9UQL6 1122 aa5.1□□□□□ -1.59
R3HDM1-220ENST00000628915 SHROOM2Q13796 1616 aa5.1□□□□□ -1.59
R3HDM1-220ENST00000628915 SOX12O15370 315 aa5.09□□□□□ -1.59
R3HDM1-220ENST00000628915 AXDND1Q5T1B0 1012 aaPredicted RBP5.09□□□□□ -1.59
R3HDM1-220ENST00000628915 NECTIN2Q92692 538 aa5.09□□□□□ -1.59
R3HDM1-220ENST00000628915 NOL8Q76FK4 1167 aaKnown RBP5.09□□□□□ -1.59
R3HDM1-220ENST00000628915 OSCARQ8IYS5 282 aa5.09□□□□□ -1.59
R3HDM1-220ENST00000628915 PHF14O94880 888 aa5.08□□□□□ -1.6
R3HDM1-220ENST00000628915 TMCO4Q5TGY1 634 aa5.08□□□□□ -1.6
R3HDM1-220ENST00000628915 E9PSI1 815 aa5.08□□□□□ -1.6
R3HDM1-220ENST00000628915 NEUROD2Q15784 382 aa5.08□□□□□ -1.6
R3HDM1-220ENST00000628915 TRIM44Q96DX7 344 aaPredicted RBP5.07□□□□□ -1.6
R3HDM1-220ENST00000628915 ABCA5Q8WWZ7 1642 aa5.07□□□□□ -1.6
R3HDM1-220ENST00000628915 PLEKHD1A6NEE1 506 aa5.07□□□□□ -1.6
R3HDM1-220ENST00000628915 APBB1O00213 710 aa5.07□□□□□ -1.6
R3HDM1-220ENST00000628915 PDS5BQ9NTI5 1447 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 CLASP1Q7Z460 1538 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 HSP90AB4PQ58FF6 505 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 CC2D2BQ6DHV5 1058 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 WIZO95785 1651 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 ZNF692Q9BU19 519 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 NESP48681 1621 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 RGS3P49796 1198 aa5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 FOXD4L6Q3SYB3 417 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 FOXD4L3Q6VB84 417 aaPredicted RBP5.06□□□□□ -1.6
R3HDM1-220ENST00000628915 GTF2E1P29083 439 aaPredicted RBP5.05□□□□□ -1.6
R3HDM1-220ENST00000628915 GRIPAP1Q4V328 841 aa5.05□□□□□ -1.6
R3HDM1-220ENST00000628915 PBRM1Q86U86 1689 aa5.04□□□□□ -1.6
R3HDM1-220ENST00000628915 STAC3Q96MF2 364 aa5.04□□□□□ -1.6
R3HDM1-220ENST00000628915 NOP58Q9Y2X3 529 aaKnown RBP5.04□□□□□ -1.6
R3HDM1-220ENST00000628915 ANP32CO43423 234 aa5.04□□□□□ -1.6
R3HDM1-220ENST00000628915 PPP1R1BQ9UD71 204 aaPredicted RBP5.04□□□□□ -1.6
R3HDM1-220ENST00000628915 IFT140Q96RY7 1462 aa5.03□□□□□ -1.6
R3HDM1-220ENST00000628915 ARID4AP29374 1257 aaPredicted RBP5.03□□□□□ -1.6
R3HDM1-220ENST00000628915 CADPSQ9ULU8 1353 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms