RNA–Protein interactions for RNA: ENST00000626119.2

COPS7A-222, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-222ENST00000626119 CFDP1Q9UEE9 299 aaPredicted RBP28.68■■■□□ 2.18
COPS7A-222ENST00000626119 CAMSAP2Q08AD1 1489 aa28.67■■■□□ 2.18
COPS7A-222ENST00000626119 ATP10BO94823 1461 aa28.66■■■□□ 2.18
COPS7A-222ENST00000626119 KIF14Q15058 1648 aa28.65■■■□□ 2.18
COPS7A-222ENST00000626119 TRIM52Q96A61 297 aa28.65■■■□□ 2.18
COPS7A-222ENST00000626119 KDM6BO15054 1643 aa28.64■■■□□ 2.18
COPS7A-222ENST00000626119 PTPRGP23470 1445 aa28.63■■■□□ 2.17
COPS7A-222ENST00000626119 DENND4BO75064 1496 aaPredicted RBP28.62■■■□□ 2.17
COPS7A-222ENST00000626119 MPHOSPH9Q99550 1183 aa28.62■■■□□ 2.17
COPS7A-222ENST00000626119 ZNF644Q9H582 1327 aaPredicted RBP28.61■■■□□ 2.17
COPS7A-222ENST00000626119 ADGRL2O95490 1459 aa28.61■■■□□ 2.17
COPS7A-222ENST00000626119 ADGBQ8N7X0 1667 aa28.6■■■□□ 2.17
COPS7A-222ENST00000626119 CHD1O14646 1710 aa28.6■■■□□ 2.17
COPS7A-222ENST00000626119 SHROOM2Q13796 1616 aa28.6■■■□□ 2.17
COPS7A-222ENST00000626119 ABCC10Q5T3U5 1492 aa28.59■■■□□ 2.17
COPS7A-222ENST00000626119 YTHDC1Q96MU7 727 aaKnown RBP28.57■■■□□ 2.16
COPS7A-222ENST00000626119 CROCC2H7BZ55 1655 aa28.56■■■□□ 2.16
COPS7A-222ENST00000626119 NCOA1Q15788 1441 aa28.55■■■□□ 2.16
COPS7A-222ENST00000626119 KDM5BQ9UGL1 1544 aa28.54■■■□□ 2.16
COPS7A-222ENST00000626119 CDC42BPAQ5VT25 1732 aa28.53■■■□□ 2.16
COPS7A-222ENST00000626119 SHANK2Q9UPX8 1470 aa28.52■■■□□ 2.16
COPS7A-222ENST00000626119 ANKRD30AQ9BXX3 1397 aa28.5■■■□□ 2.15
COPS7A-222ENST00000626119 GTF3C3Q9Y5Q9 886 aa28.5■■■□□ 2.15
COPS7A-222ENST00000626119 ANKRD30BQ9BXX2 1392 aa28.47■■■□□ 2.15
COPS7A-222ENST00000626119 ZNF777Q9ULD5 760 aaPredicted RBP28.44■■■□□ 2.14
COPS7A-222ENST00000626119 RPRD2Q5VT52 1461 aaKnown RBP28.44■■■□□ 2.14
COPS7A-222ENST00000626119 ARHGEF5Q12774 1597 aa28.42■■■□□ 2.14
COPS7A-222ENST00000626119 SLC4A1APQ9BWU0 796 aaKnown RBP28.41■■■□□ 2.14
COPS7A-222ENST00000626119 DDX10Q13206 875 aaKnown RBP28.39■■■□□ 2.14
COPS7A-222ENST00000626119 RSPH4AQ5TD94 716 aa28.39■■■□□ 2.14
COPS7A-222ENST00000626119 PZPP20742 1482 aa28.37■■■□□ 2.13
COPS7A-222ENST00000626119 ABCC2Q92887 1545 aa28.36■■■□□ 2.13
COPS7A-222ENST00000626119 C9orf84Q5VXU9 1444 aa28.36■■■□□ 2.13
COPS7A-222ENST00000626119 ANKRD50Q9ULJ7 1429 aa28.36■■■□□ 2.13
COPS7A-222ENST00000626119 TSPY4P0CV99 314 aa28.35■■■□□ 2.13
COPS7A-222ENST00000626119 TSPY10P0CW01 314 aa28.35■■■□□ 2.13
COPS7A-222ENST00000626119 PREX2Q70Z35 1606 aa28.35■■■□□ 2.13
COPS7A-222ENST00000626119 CLASP1Q7Z460 1538 aa28.32■■■□□ 2.12
COPS7A-222ENST00000626119 L3MBTL2Q969R5 705 aa28.32■■■□□ 2.12
COPS7A-222ENST00000626119 KIAA1107Q9UPP5 1409 aa28.3■■■□□ 2.12
COPS7A-222ENST00000626119 MBD5Q9P267 1494 aa28.3■■■□□ 2.12
COPS7A-222ENST00000626119 TEX14Q8IWB6 1497 aa28.29■■■□□ 2.12
COPS7A-222ENST00000626119 CCDC141Q6ZP82 1450 aa28.28■■■□□ 2.12
COPS7A-222ENST00000626119 KDM5DQ9BY66 1539 aa28.27■■■□□ 2.12
COPS7A-222ENST00000626119 CCER2I3L3R5 266 aa28.27■■■□□ 2.12
COPS7A-222ENST00000626119 CDC42BPBQ9Y5S2 1711 aa28.27■■■□□ 2.12
COPS7A-222ENST00000626119 UHRF1BP1LA0JNW5 1464 aa28.27■■■□□ 2.12
COPS7A-222ENST00000626119 FOXD1Q16676 465 aa28.27■■■□□ 2.12
COPS7A-222ENST00000626119 EIF4G2P78344 907 aaKnown RBP eCLIP28.26■■■□□ 2.11
COPS7A-222ENST00000626119 SAMD9LQ8IVG5 1584 aa28.25■■■□□ 2.11
COPS7A-222ENST00000626119 ANP32CO43423 234 aa28.24■■■□□ 2.11
COPS7A-222ENST00000626119 HIRIP3Q9BW71 556 aaPredicted RBP28.24■■■□□ 2.11
COPS7A-222ENST00000626119 PLEKHH2Q8IVE3 1493 aa28.23■■■□□ 2.11
COPS7A-222ENST00000626119 ERCC6L2Q5T890 1561 aa28.21■■■□□ 2.11
COPS7A-222ENST00000626119 MAST1Q9Y2H9 1570 aa28.2■■■□□ 2.11
COPS7A-222ENST00000626119 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.2■■■□□ 2.11
COPS7A-222ENST00000626119 KIF15Q9NS87 1388 aa28.19■■■□□ 2.1
COPS7A-222ENST00000626119 HSPA5P11021 654 aaKnown RBP28.19■■■□□ 2.1
COPS7A-222ENST00000626119 HNRNPMP52272 730 aaKnown RBP eCLIP28.18■■■□□ 2.1
COPS7A-222ENST00000626119 TTC37Q6PGP7 1564 aa28.16■■■□□ 2.1
COPS7A-222ENST00000626119 NUP155O75694 1391 aa28.16■■■□□ 2.1
COPS7A-222ENST00000626119 MYO5CQ9NQX4 1742 aa28.16■■■□□ 2.1
COPS7A-222ENST00000626119 PKD2Q13563 968 aa28.16■■■□□ 2.1
COPS7A-222ENST00000626119 ARHGAP5Q13017 1502 aa28.15■■■□□ 2.1
COPS7A-222ENST00000626119 ZCCHC11Q5TAX3 1644 aaKnown RBP28.1■■■□□ 2.09
COPS7A-222ENST00000626119 SYCP2Q9BX26 1530 aa28.09■■■□□ 2.09
COPS7A-222ENST00000626119 NBPF8Q3BBV2 869 aa28.08■■■□□ 2.09
COPS7A-222ENST00000626119 WASHC2AQ641Q2 1341 aa28.08■■■□□ 2.09
COPS7A-222ENST00000626119 PLCH2O75038 1416 aa28.07■■■□□ 2.08
COPS7A-222ENST00000626119 PLXNC1O60486 1568 aa28.07■■■□□ 2.08
COPS7A-222ENST00000626119 SPATA31E1Q6ZUB1 1445 aa28.05■■■□□ 2.08
COPS7A-222ENST00000626119 ARHGEF12Q9NZN5 1544 aa28.05■■■□□ 2.08
COPS7A-222ENST00000626119 ARAP3Q8WWN8 1544 aa28.02■■■□□ 2.08
COPS7A-222ENST00000626119 UHRF1BP1Q6BDS2 1440 aa28.02■■■□□ 2.08
COPS7A-222ENST00000626119 KCNH8Q96L42 1107 aa28.02■■■□□ 2.08
COPS7A-222ENST00000626119 EFCAB2Q5VUJ9 269 aa28.01■■■□□ 2.07
COPS7A-222ENST00000626119 UNC13BO14795 1591 aa28■■■□□ 2.07
COPS7A-222ENST00000626119 PELP1Q8IZL8 1130 aaKnown RBP27.99■■■□□ 2.07
COPS7A-222ENST00000626119 FAM135AQ9P2D6 1515 aa27.99■■■□□ 2.07
COPS7A-222ENST00000626119 CCDC7Q96M83 1385 aa27.99■■■□□ 2.07
COPS7A-222ENST00000626119 POLR1AO95602 1720 aaPredicted RBP27.99■■■□□ 2.07
COPS7A-222ENST00000626119 CNTLNQ9NXG0 1405 aa27.98■■■□□ 2.07
COPS7A-222ENST00000626119 DUOX2Q9NRD8 1548 aa27.97■■■□□ 2.07
COPS7A-222ENST00000626119 ERBINQ96RT1 1412 aa27.94■■■□□ 2.06
COPS7A-222ENST00000626119 ABCC1P33527 1531 aa27.93■■■□□ 2.06
COPS7A-222ENST00000626119 ARID4BQ4LE39 1312 aaPredicted RBP27.91■■■□□ 2.06
COPS7A-222ENST00000626119 RALGAPBQ86X10 1494 aa27.9■■■□□ 2.06
COPS7A-222ENST00000626119 IQGAP3Q86VI3 1631 aa27.89■■■□□ 2.06
COPS7A-222ENST00000626119 MAGI2Q86UL8 1455 aa27.88■■■□□ 2.05
COPS7A-222ENST00000626119 RTEL1-TNFRSF6BF6WH68 1400 aa27.87■■■□□ 2.05
COPS7A-222ENST00000626119 WDR7Q9Y4E6 1490 aa27.85■■■□□ 2.05
COPS7A-222ENST00000626119 USP47Q96K76 1375 aa27.85■■■□□ 2.05
COPS7A-222ENST00000626119 C11orf95C9JLR9 678 aaPredicted RBP27.84■■■□□ 2.05
COPS7A-222ENST00000626119 KDM5CP41229 1560 aa27.83■■■□□ 2.05
COPS7A-222ENST00000626119 CCDC144AA2RUR9 1427 aa27.83■■■□□ 2.05
COPS7A-222ENST00000626119 KIF7Q2M1P5 1343 aa27.83■■■□□ 2.05
COPS7A-222ENST00000626119 ATP10AO60312 1499 aa27.82■■■□□ 2.04
COPS7A-222ENST00000626119 ABCA9Q8IUA7 1624 aa27.77■■■□□ 2.04
COPS7A-222ENST00000626119 TRAPPC8Q9Y2L5 1435 aa27.76■■■□□ 2.04
COPS7A-222ENST00000626119 ROCK2O75116 1388 aaKnown RBP27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms