RNA–Protein interactions for RNA: ENST00000620788.1

PHLDB1-227, Transcript of pleckstrin homology like domain family B member 1, humanhuman

TSL 2

Gene PHLDB1, Length 5,898 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHLDB1-227ENST00000620788 WDR43Q15061 677 aaKnown RBP eCLIP13.49□□□□□ -0.25
PHLDB1-227ENST00000620788 CHMP4AQ9BY43 222 aa13.49□□□□□ -0.25
PHLDB1-227ENST00000620788 KIAA1211Q6ZU35 1233 aa13.48□□□□□ -0.25
PHLDB1-227ENST00000620788 TPRNQ4KMQ1 711 aa13.48□□□□□ -0.25
PHLDB1-227ENST00000620788 SLC4A3P48751 1232 aa13.48□□□□□ -0.25
PHLDB1-227ENST00000620788 CWC15Q9P013 229 aaKnown RBP13.48□□□□□ -0.25
PHLDB1-227ENST00000620788 PRDM10Q9NQV6 1147 aa13.48□□□□□ -0.25
PHLDB1-227ENST00000620788 HSP90B1P14625 803 aaKnown RBP13.46□□□□□ -0.25
PHLDB1-227ENST00000620788 CGNQ9P2M7 1197 aaKnown RBP13.46□□□□□ -0.25
PHLDB1-227ENST00000620788 CALD1Q05682 793 aaKnown RBP13.46□□□□□ -0.26
PHLDB1-227ENST00000620788 SKOR2Q2VWA4 1001 aaPredicted RBP13.45□□□□□ -0.26
PHLDB1-227ENST00000620788 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
PHLDB1-227ENST00000620788 KLHL34Q8N239 644 aa13.44□□□□□ -0.26
PHLDB1-227ENST00000620788 AAMPQ13685 434 aa13.44□□□□□ -0.26
PHLDB1-227ENST00000620788 WWC1Q8IX03 1113 aa13.44□□□□□ -0.26
PHLDB1-227ENST00000620788 SYAP1Q96A49 352 aaPredicted RBP13.44□□□□□ -0.26
PHLDB1-227ENST00000620788 CCDC9Q9Y3X0 531 aaKnown RBP13.43□□□□□ -0.26
PHLDB1-227ENST00000620788 DEF6Q9H4E7 631 aa13.42□□□□□ -0.26
PHLDB1-227ENST00000620788 ESPNB1AK53 854 aa13.41□□□□□ -0.26
PHLDB1-227ENST00000620788 DNAJC2Q99543 621 aaKnown RBP13.41□□□□□ -0.26
PHLDB1-227ENST00000620788 HMGN5P82970 282 aaKnown RBP13.4□□□□□ -0.26
PHLDB1-227ENST00000620788 CLGNO14967 610 aa13.4□□□□□ -0.26
PHLDB1-227ENST00000620788 ZNF526Q8TF50 670 aaPredicted RBP13.4□□□□□ -0.26
PHLDB1-227ENST00000620788 UQCRHLA0A096LP55 91 aa13.39□□□□□ -0.27
PHLDB1-227ENST00000620788 UQCRHP07919 91 aa13.39□□□□□ -0.27
PHLDB1-227ENST00000620788 EEA1Q15075 1411 aa13.39□□□□□ -0.27
PHLDB1-227ENST00000620788 DIAPH3Q9NSV4 1193 aa13.38□□□□□ -0.27
PHLDB1-227ENST00000620788 MS4A1P11836 297 aa13.38□□□□□ -0.27
PHLDB1-227ENST00000620788 FTSJ3Q8IY81 847 aaKnown RBP13.38□□□□□ -0.27
PHLDB1-227ENST00000620788 EIF4G2P78344 907 aaKnown RBP eCLIP13.37□□□□□ -0.27
PHLDB1-227ENST00000620788 RDXP35241 583 aaKnown RBP13.37□□□□□ -0.27
PHLDB1-227ENST00000620788 DHX37Q8IY37 1157 aaKnown RBP13.36□□□□□ -0.27
PHLDB1-227ENST00000620788 IPO4Q8TEX9 1081 aaKnown RBP13.36□□□□□ -0.27
PHLDB1-227ENST00000620788 SENP3-EIF4A1A0A087X0R7 540 aa13.36□□□□□ -0.27
PHLDB1-227ENST00000620788 AXDND1Q5T1B0 1012 aaPredicted RBP13.35□□□□□ -0.27
PHLDB1-227ENST00000620788 CALCOCO1Q9P1Z2 691 aa13.35□□□□□ -0.27
PHLDB1-227ENST00000620788 CASC1Q6TDU7 716 aa13.35□□□□□ -0.27
PHLDB1-227ENST00000620788 GPATCH11Q8N954 259 aa13.35□□□□□ -0.27
PHLDB1-227ENST00000620788 KIF3AQ9Y496 699 aa13.34□□□□□ -0.27
PHLDB1-227ENST00000620788 DDX49Q9Y6V7 483 aaKnown RBP13.34□□□□□ -0.27
PHLDB1-227ENST00000620788 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
PHLDB1-227ENST00000620788 FRAT2O75474 233 aaPredicted RBP13.33□□□□□ -0.27
PHLDB1-227ENST00000620788 KCNJ4P48050 445 aa13.33□□□□□ -0.27
PHLDB1-227ENST00000620788 C11orf95C9JLR9 678 aaPredicted RBP13.33□□□□□ -0.28
PHLDB1-227ENST00000620788 SSR1P43307 286 aaKnown RBP13.32□□□□□ -0.28
PHLDB1-227ENST00000620788 NOC3LQ8WTT2 800 aaKnown RBP13.32□□□□□ -0.28
PHLDB1-227ENST00000620788 FAM193AP78312 1265 aa13.32□□□□□ -0.28
PHLDB1-227ENST00000620788 CCDC173Q0VFZ6 552 aa13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 GOLGA6L4A6NEF3 574 aa13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 PHF14O94880 888 aa13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 CBX1P83916 185 aa13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 CCDC39Q9UFE4 941 aa13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 NASPP49321 788 aaPredicted RBP13.31□□□□□ -0.28
PHLDB1-227ENST00000620788 SMAP1Q8IYB5 467 aaPredicted RBP13.3□□□□□ -0.28
PHLDB1-227ENST00000620788 VGLL3A8MV65 326 aa13.3□□□□□ -0.28
PHLDB1-227ENST00000620788 ISY1Q9ULR0 285 aaKnown RBP13.3□□□□□ -0.28
PHLDB1-227ENST00000620788 USP8P40818 1118 aa13.29□□□□□ -0.28
PHLDB1-227ENST00000620788 STK11IPQ8N1F8 1099 aa13.29□□□□□ -0.28
PHLDB1-227ENST00000620788 HSP90AB3PQ58FF7 597 aa13.29□□□□□ -0.28
PHLDB1-227ENST00000620788 GTF2A1P52655 376 aaPredicted RBP13.29□□□□□ -0.28
PHLDB1-227ENST00000620788 TIGD1Q96MW7 591 aa13.28□□□□□ -0.28
PHLDB1-227ENST00000620788 ARGLU1Q9NWB6 273 aaPredicted RBP13.28□□□□□ -0.28
PHLDB1-227ENST00000620788 NUDCQ9Y266 331 aa13.28□□□□□ -0.28
PHLDB1-227ENST00000620788 ERICH4A6NGS2 130 aa13.28□□□□□ -0.28
PHLDB1-227ENST00000620788 GTPBP4Q9BZE4 634 aaKnown RBP13.28□□□□□ -0.28
PHLDB1-227ENST00000620788 TNNT1P13805 278 aa13.27□□□□□ -0.28
PHLDB1-227ENST00000620788 NEFHP12036 1026 aa13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 CLCN1P35523 988 aa13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 CHMP5Q9NZZ3 219 aa13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 KCNH8Q96L42 1107 aa13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 RCAN3Q9UKA8 241 aa13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 LMOD3Q0VAK6 560 aa13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 OS9Q13438 667 aaPredicted RBP13.26□□□□□ -0.29
PHLDB1-227ENST00000620788 ZNF592Q92610 1267 aa13.25□□□□□ -0.29
PHLDB1-227ENST00000620788 H0YHG0 523 aa13.25□□□□□ -0.29
PHLDB1-227ENST00000620788 PDCL2Q8N4E4 241 aa13.25□□□□□ -0.29
PHLDB1-227ENST00000620788 LEKR1Q6ZMV7 388 aa13.24□□□□□ -0.29
PHLDB1-227ENST00000620788 GIMAP7Q8NHV1 300 aa13.24□□□□□ -0.29
PHLDB1-227ENST00000620788 ZSCAN30Q86W11 494 aa13.23□□□□□ -0.29
PHLDB1-227ENST00000620788 TRAK2O60296 914 aa13.23□□□□□ -0.29
PHLDB1-227ENST00000620788 PLCD4Q9BRC7 762 aa13.23□□□□□ -0.29
PHLDB1-227ENST00000620788 RBM25P49756 843 aaKnown RBP13.23□□□□□ -0.29
PHLDB1-227ENST00000620788 GRPEL1Q9HAV7 217 aa13.23□□□□□ -0.29
PHLDB1-227ENST00000620788 KIF20AO95235 890 aa13.22□□□□□ -0.29
PHLDB1-227ENST00000620788 PPP4R3BQ5MIZ7 849 aa13.22□□□□□ -0.29
PHLDB1-227ENST00000620788 AK7Q96M32 723 aa13.22□□□□□ -0.29
PHLDB1-227ENST00000620788 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
PHLDB1-227ENST00000620788 TDO2P48775 406 aa13.21□□□□□ -0.29
PHLDB1-227ENST00000620788 HDAC5Q9UQL6 1122 aa13.2□□□□□ -0.3
PHLDB1-227ENST00000620788 TRERF1Q96PN7 1200 aa13.2□□□□□ -0.3
PHLDB1-227ENST00000620788 GNL2Q13823 731 aaKnown RBP13.19□□□□□ -0.3
PHLDB1-227ENST00000620788 MFAP1P55081 439 aaKnown RBP13.19□□□□□ -0.3
PHLDB1-227ENST00000620788 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
PHLDB1-227ENST00000620788 DYNC1I1O14576 645 aa13.19□□□□□ -0.3
PHLDB1-227ENST00000620788 SASS6Q6UVJ0 657 aa13.19□□□□□ -0.3
PHLDB1-227ENST00000620788 CFAP44Q96MT7 982 aa13.19□□□□□ -0.3
PHLDB1-227ENST00000620788 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
PHLDB1-227ENST00000620788 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
PHLDB1-227ENST00000620788 PAIP2Q9BPZ3 127 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms