RNA–Protein interactions for RNA: ENST00000614096.4

UBE3A-207, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE3A, Length 8,741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-207ENST00000614096 KIF16BQ96L93 1317 aa18.45■□□□□ 0.54
UBE3A-207ENST00000614096 TPM1P09493 284 aa18.44■□□□□ 0.54
UBE3A-207ENST00000614096 GZF1Q9H116 711 aaPredicted RBP18.44■□□□□ 0.54
UBE3A-207ENST00000614096 GPATCH3Q96I76 525 aa18.44■□□□□ 0.54
UBE3A-207ENST00000614096 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.44■□□□□ 0.54
UBE3A-207ENST00000614096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.43■□□□□ 0.549e-8■■■□□ 14.6
UBE3A-207ENST00000614096 CCDC66A2RUB6 948 aa18.43■□□□□ 0.54
UBE3A-207ENST00000614096 ACBD3Q9H3P7 528 aa18.42■□□□□ 0.54
UBE3A-207ENST00000614096 NPM1P06748 294 aaKnown RBP eCLIP18.41■□□□□ 0.54
UBE3A-207ENST00000614096 CDR1P51861 262 aa18.41■□□□□ 0.54
UBE3A-207ENST00000614096 GOLGA3Q08378 1498 aa18.41■□□□□ 0.54
UBE3A-207ENST00000614096 PMFBP1Q8TBY8 1022 aa18.41■□□□□ 0.54
UBE3A-207ENST00000614096 ST18O60284 1047 aa18.41■□□□□ 0.54
UBE3A-207ENST00000614096 RWDD1Q9H446 243 aaPredicted RBP18.41■□□□□ 0.54
UBE3A-207ENST00000614096 HDAC5Q9UQL6 1122 aa18.4■□□□□ 0.54
UBE3A-207ENST00000614096 TIMELESSQ9UNS1 1208 aa18.4■□□□□ 0.54
UBE3A-207ENST00000614096 GOLGA6L19H0YKK7 550 aa18.39■□□□□ 0.53
UBE3A-207ENST00000614096 GSE1Q14687 1217 aa18.37■□□□□ 0.53
UBE3A-207ENST00000614096 ARGLU1Q9NWB6 273 aaPredicted RBP18.37■□□□□ 0.53
UBE3A-207ENST00000614096 CCDC191Q8NCU4 936 aa18.36■□□□□ 0.53
UBE3A-207ENST00000614096 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
UBE3A-207ENST00000614096 AK7Q96M32 723 aa18.36■□□□□ 0.53
UBE3A-207ENST00000614096 DCTN1Q14203 1278 aa18.36■□□□□ 0.53
UBE3A-207ENST00000614096 SCRIBQ14160 1630 aa18.35■□□□□ 0.53
UBE3A-207ENST00000614096 TPM2P07951 284 aa18.34■□□□□ 0.53
UBE3A-207ENST00000614096 A0A0G2JS52 829 aa18.34■□□□□ 0.53
UBE3A-207ENST00000614096 CARD11Q9BXL7 1154 aa18.34■□□□□ 0.53
UBE3A-207ENST00000614096 NPHP1O15259 732 aa18.34■□□□□ 0.53
UBE3A-207ENST00000614096 RDXP35241 583 aaKnown RBP18.34■□□□□ 0.53
UBE3A-207ENST00000614096 HSP90B1P14625 803 aaKnown RBP18.33■□□□□ 0.53
UBE3A-207ENST00000614096 CHIC2Q9UKJ5 165 aa18.33■□□□□ 0.53
UBE3A-207ENST00000614096 ARID3CA6NKF2 412 aa18.33■□□□□ 0.52
UBE3A-207ENST00000614096 SLKQ9H2G2 1235 aaPredicted RBP18.33■□□□□ 0.52
UBE3A-207ENST00000614096 TAF3Q5VWG9 929 aa18.33■□□□□ 0.52
UBE3A-207ENST00000614096 SPRYD3Q8NCJ5 442 aa18.32■□□□□ 0.52
UBE3A-207ENST00000614096 PPP1R15AO75807 674 aaPredicted RBP18.32■□□□□ 0.52
UBE3A-207ENST00000614096 IPO7O95373 1038 aaKnown RBP18.32■□□□□ 0.52
UBE3A-207ENST00000614096 C14orf37Q86TY3 774 aa18.32■□□□□ 0.52
UBE3A-207ENST00000614096 PRM3Q9NNZ6 103 aa18.31■□□□□ 0.52
UBE3A-207ENST00000614096 HSP90B2PQ58FF3 399 aa18.3■□□□□ 0.52
UBE3A-207ENST00000614096 RUFY1Q96T51 708 aa18.29■□□□□ 0.52
UBE3A-207ENST00000614096 TAOK2Q9UL54 1235 aa18.28■□□□□ 0.52
UBE3A-207ENST00000614096 KTN1Q86UP2 1357 aaKnown RBP18.27■□□□□ 0.52
UBE3A-207ENST00000614096 RCAN3Q9UKA8 241 aa18.27■□□□□ 0.51
UBE3A-207ENST00000614096 HIRIP3Q9BW71 556 aaPredicted RBP18.27■□□□□ 0.51
UBE3A-207ENST00000614096 DIAPH3Q9NSV4 1193 aa18.27■□□□□ 0.51
UBE3A-207ENST00000614096 HOOK1Q9UJC3 728 aaKnown RBP18.26■□□□□ 0.51
UBE3A-207ENST00000614096 ZCCHC6Q5VYS8 1495 aaKnown RBP18.26■□□□□ 0.51
UBE3A-207ENST00000614096 NCBP3Q53F19 620 aaKnown RBP18.25■□□□□ 0.51
UBE3A-207ENST00000614096 ANKRD20A12PQ8NF67 263 aa18.25■□□□□ 0.51
UBE3A-207ENST00000614096 TMF1P82094 1093 aa18.25■□□□□ 0.51
UBE3A-207ENST00000614096 CEP162Q5TB80 1403 aa18.24■□□□□ 0.51
UBE3A-207ENST00000614096 NEUROD2Q15784 382 aa18.24■□□□□ 0.51
UBE3A-207ENST00000614096 BECN2A8MW95 431 aa18.24■□□□□ 0.51
UBE3A-207ENST00000614096 TPD52L1Q16890 204 aaPredicted RBP18.24■□□□□ 0.51
UBE3A-207ENST00000614096 FAM43AQ8N2R8 423 aa18.23■□□□□ 0.51
UBE3A-207ENST00000614096 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
UBE3A-207ENST00000614096 CCAR2Q8N163 923 aaKnown RBP18.22■□□□□ 0.51
UBE3A-207ENST00000614096 MYO6Q9UM54 1294 aa18.22■□□□□ 0.51
UBE3A-207ENST00000614096 RASSF8Q8NHQ8 419 aa18.21■□□□□ 0.51
UBE3A-207ENST00000614096 ERCC4Q92889 916 aaPredicted RBP18.21■□□□□ 0.51
UBE3A-207ENST00000614096 RALBP1Q15311 655 aa18.2■□□□□ 0.5
UBE3A-207ENST00000614096 STK11IPQ8N1F8 1099 aa18.2■□□□□ 0.5
UBE3A-207ENST00000614096 PKNOX2Q96KN3 472 aa18.2■□□□□ 0.5
UBE3A-207ENST00000614096 CAGE1Q8TC20 777 aa18.19■□□□□ 0.5
UBE3A-207ENST00000614096 H0YHG0 523 aa18.19■□□□□ 0.5
UBE3A-207ENST00000614096 FHAD1B1AJZ9 1412 aa18.19■□□□□ 0.5
UBE3A-207ENST00000614096 SF3A1Q15459 793 aaKnown RBP18.19■□□□□ 0.5
UBE3A-207ENST00000614096 FAM13BQ9NYF5 915 aa18.19■□□□□ 0.5
UBE3A-207ENST00000614096 CEP164Q9UPV0 1460 aa18.19■□□□□ 0.5
UBE3A-207ENST00000614096 FANCIQ9NVI1 1328 aa18.18■□□□□ 0.5
UBE3A-207ENST00000614096 USP8P40818 1118 aa18.18■□□□□ 0.5
UBE3A-207ENST00000614096 RTF1Q92541 710 aaKnown RBP18.18■□□□□ 0.5
UBE3A-207ENST00000614096 DDX49Q9Y6V7 483 aaKnown RBP18.17■□□□□ 0.5
UBE3A-207ENST00000614096 HMGN5P82970 282 aaKnown RBP18.17■□□□□ 0.5
UBE3A-207ENST00000614096 PDE3BQ13370 1112 aa18.17■□□□□ 0.5
UBE3A-207ENST00000614096 DHX8Q14562 1220 aaKnown RBP18.16■□□□□ 0.5
UBE3A-207ENST00000614096 U2SURPO15042 1029 aaKnown RBP18.16■□□□□ 0.5
UBE3A-207ENST00000614096 INCENPQ9NQS7 918 aa18.16■□□□□ 0.5
UBE3A-207ENST00000614096 NEXNQ0ZGT2 675 aa18.14■□□□□ 0.5
UBE3A-207ENST00000614096 ZRSR2Q15696 482 aaKnown RBP18.14■□□□□ 0.49
UBE3A-207ENST00000614096 PATL2C9JE40 543 aaKnown RBP18.14■□□□□ 0.49
UBE3A-207ENST00000614096 H3BQV1 296 aa18.14■□□□□ 0.49
UBE3A-207ENST00000614096 IFFO2Q5TF58 517 aa18.14■□□□□ 0.49
UBE3A-207ENST00000614096 HOMER1Q86YM7 354 aa18.14■□□□□ 0.49
UBE3A-207ENST00000614096 LRRFIP1Q32MZ4 808 aaKnown RBP18.13■□□□□ 0.49
UBE3A-207ENST00000614096 RRP7BPQ9NSQ0 103 aa18.13■□□□□ 0.49
UBE3A-207ENST00000614096 LEKR1Q6ZMV7 388 aa18.13■□□□□ 0.49
UBE3A-207ENST00000614096 GOLGA6L7A0A1B0GV03 622 aa18.12■□□□□ 0.49
UBE3A-207ENST00000614096 CENPQQ7L2Z9 268 aaPredicted RBP18.12■□□□□ 0.49
UBE3A-207ENST00000614096 ROCK2O75116 1388 aaKnown RBP18.12■□□□□ 0.49
UBE3A-207ENST00000614096 CCP110O43303 1012 aa18.12■□□□□ 0.49
UBE3A-207ENST00000614096 EIF3AQ14152 1382 aaKnown RBP18.12■□□□□ 0.49
UBE3A-207ENST00000614096 ITPRIPQ8IWB1 547 aa18.12■□□□□ 0.49
UBE3A-207ENST00000614096 TSHZ2Q9NRE2 1034 aa18.11■□□□□ 0.49
UBE3A-207ENST00000614096 ISY1Q9ULR0 285 aaKnown RBP18.11■□□□□ 0.49
UBE3A-207ENST00000614096 MFAP1P55081 439 aaKnown RBP18.11■□□□□ 0.49
UBE3A-207ENST00000614096 TRIM6-TRIM34B2RNG4 842 aa18.11■□□□□ 0.49
UBE3A-207ENST00000614096 SPAG9O60271 1321 aaKnown RBP18.11■□□□□ 0.49
UBE3A-207ENST00000614096 CCDC173Q0VFZ6 552 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms