RNA–Protein interactions for RNA: ENST00000611010.4

FDPS-220, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 5 BASIC

Gene FDPS, Length 1,196 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-220ENST00000611010 ARHGEF12Q9NZN5 1544 aa19.93■□□□□ 0.78
FDPS-220ENST00000611010 PLCH2O75038 1416 aa19.91■□□□□ 0.78
FDPS-220ENST00000611010 PREX1Q8TCU6 1659 aa19.91■□□□□ 0.78
FDPS-220ENST00000611010 HSPA2P54652 639 aa19.9■□□□□ 0.78
FDPS-220ENST00000611010 SCAPERQ9BY12 1400 aa19.89■□□□□ 0.77
FDPS-220ENST00000611010 ARHGAP35Q9NRY4 1499 aa19.89■□□□□ 0.77
FDPS-220ENST00000611010 KDM5CP41229 1560 aa19.88■□□□□ 0.77
FDPS-220ENST00000611010 CDC42BPBQ9Y5S2 1711 aa19.85■□□□□ 0.77
FDPS-220ENST00000611010 DIP2CQ9Y2E4 1556 aa19.85■□□□□ 0.77
FDPS-220ENST00000611010 STRCQ7RTU9 1775 aa19.85■□□□□ 0.77
FDPS-220ENST00000611010 C9orf84Q5VXU9 1444 aa19.85■□□□□ 0.77
FDPS-220ENST00000611010 ABCA6Q8N139 1617 aa19.84■□□□□ 0.77
FDPS-220ENST00000611010 PLPPR3Q6T4P5 718 aa19.83■□□□□ 0.77
FDPS-220ENST00000611010 ATP10AO60312 1499 aa19.83■□□□□ 0.76
FDPS-220ENST00000611010 MLECQ14165 292 aa19.81■□□□□ 0.76
FDPS-220ENST00000611010 FMN1Q68DA7 1419 aa19.8■□□□□ 0.76
FDPS-220ENST00000611010 PREX2Q70Z35 1606 aa19.8■□□□□ 0.76
FDPS-220ENST00000611010 REREQ9P2R6 1566 aa19.79■□□□□ 0.76
FDPS-220ENST00000611010 ZNF518AQ6AHZ1 1483 aa19.79■□□□□ 0.76
FDPS-220ENST00000611010 C3P01024 1663 aa19.78■□□□□ 0.76
FDPS-220ENST00000611010 ITSN2Q9NZM3 1697 aa19.78■□□□□ 0.76
FDPS-220ENST00000611010 ARHGAP5Q13017 1502 aa19.78■□□□□ 0.76
FDPS-220ENST00000611010 TROQ12816 1431 aaPredicted RBP19.77■□□□□ 0.76
FDPS-220ENST00000611010 ABCC1P33527 1531 aa19.76■□□□□ 0.75
FDPS-220ENST00000611010 CDC42BPAQ5VT25 1732 aa19.74■□□□□ 0.75
FDPS-220ENST00000611010 EHMT2Q96KQ7 1210 aa19.73■□□□□ 0.75
FDPS-220ENST00000611010 KIDINS220Q9ULH0 1771 aa19.72■□□□□ 0.75
FDPS-220ENST00000611010 CEBPAP49715 358 aaPredicted RBP19.71■□□□□ 0.75
FDPS-220ENST00000611010 EFCAB2Q5VUJ9 269 aa19.71■□□□□ 0.75
FDPS-220ENST00000611010 CERKQ8TCT0 537 aa19.7■□□□□ 0.74
FDPS-220ENST00000611010 MLH3Q9UHC1 1453 aa19.69■□□□□ 0.74
FDPS-220ENST00000611010 AFAP1Q8N556 730 aa19.69■□□□□ 0.74
FDPS-220ENST00000611010 TRAPPC8Q9Y2L5 1435 aa19.68■□□□□ 0.74
FDPS-220ENST00000611010 CHIC1Q5VXU3 224 aa19.68■□□□□ 0.74
FDPS-220ENST00000611010 SETD1BQ9UPS6 1966 aaKnown RBP19.68■□□□□ 0.74
FDPS-220ENST00000611010 AGLP35573 1532 aa19.67■□□□□ 0.74
FDPS-220ENST00000611010 CLIP1P30622 1438 aa19.67■□□□□ 0.74
FDPS-220ENST00000611010 ATP1B4Q9UN42 357 aaPredicted RBP19.66■□□□□ 0.74
FDPS-220ENST00000611010 UBTFP17480 764 aaKnown RBP19.65■□□□□ 0.74
FDPS-220ENST00000611010 UHRF1BP1Q6BDS2 1440 aa19.65■□□□□ 0.74
FDPS-220ENST00000611010 SAMD9LQ8IVG5 1584 aa19.64■□□□□ 0.73
FDPS-220ENST00000611010 CCDC18Q5T9S5 1454 aa19.61■□□□□ 0.73
FDPS-220ENST00000611010 CASKIN1Q8WXD9 1431 aa19.61■□□□□ 0.73
FDPS-220ENST00000611010 CDK11AQ9UQ88 783 aaPredicted RBP19.61■□□□□ 0.73
FDPS-220ENST00000611010 MROH2AA6NES4 1674 aa19.61■□□□□ 0.73
FDPS-220ENST00000611010 LTBP4Q8N2S1 1624 aa19.6■□□□□ 0.73
FDPS-220ENST00000611010 SYCP2Q9BX26 1530 aa19.59■□□□□ 0.73
FDPS-220ENST00000611010 INO80Q9ULG1 1556 aaPredicted RBP19.57■□□□□ 0.72
FDPS-220ENST00000611010 SUPT6HQ7KZ85 1726 aaKnown RBP19.56■□□□□ 0.72
FDPS-220ENST00000611010 PLXNC1O60486 1568 aa19.56■□□□□ 0.72
FDPS-220ENST00000611010 FYCO1Q9BQS8 1478 aa19.55■□□□□ 0.72
FDPS-220ENST00000611010 PTPRTO14522 1441 aa19.55■□□□□ 0.72
FDPS-220ENST00000611010 NCOA1Q15788 1441 aa19.54■□□□□ 0.72
FDPS-220ENST00000611010 ZNF142P52746 1687 aaPredicted RBP19.54■□□□□ 0.72
FDPS-220ENST00000611010 CLTCQ00610 1675 aaKnown RBP19.54■□□□□ 0.72
FDPS-220ENST00000611010 MYO3AQ8NEV4 1616 aa19.53■□□□□ 0.72
FDPS-220ENST00000611010 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
FDPS-220ENST00000611010 ATP7AQ04656 1500 aa19.51■□□□□ 0.71
FDPS-220ENST00000611010 GPATCH8Q9UKJ3 1502 aaKnown RBP19.51■□□□□ 0.71
FDPS-220ENST00000611010 SPATA31D1Q6ZQQ2 1576 aa19.5■□□□□ 0.71
FDPS-220ENST00000611010 CNTLNQ9NXG0 1405 aa19.5■□□□□ 0.71
FDPS-220ENST00000611010 MYT1LQ9UL68 1186 aa19.49■□□□□ 0.71
FDPS-220ENST00000611010 ILDR2Q71H61 639 aa19.48■□□□□ 0.71
FDPS-220ENST00000611010 NPATQ14207 1427 aa19.46■□□□□ 0.71
FDPS-220ENST00000611010 DMRT2Q9Y5R5 561 aa19.46■□□□□ 0.71
FDPS-220ENST00000611010 IQSEC2Q5JU85 1478 aa19.45■□□□□ 0.7
FDPS-220ENST00000611010 ADGBQ8N7X0 1667 aa19.44■□□□□ 0.7
FDPS-220ENST00000611010 TIAM1Q13009 1591 aa19.44■□□□□ 0.7
FDPS-220ENST00000611010 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
FDPS-220ENST00000611010 DISP3Q9P2K9 1392 aa19.43■□□□□ 0.7
FDPS-220ENST00000611010 ZMYM3Q14202 1370 aa19.4■□□□□ 0.7
FDPS-220ENST00000611010 A2MP01023 1474 aa19.4■□□□□ 0.7
FDPS-220ENST00000611010 PTPRKQ15262 1439 aa19.39■□□□□ 0.69
FDPS-220ENST00000611010 KIAA1107Q9UPP5 1409 aa19.39■□□□□ 0.69
FDPS-220ENST00000611010 TCOF1Q13428 1488 aaKnown RBP19.39■□□□□ 0.69
FDPS-220ENST00000611010 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
FDPS-220ENST00000611010 ZNF777Q9ULD5 760 aaPredicted RBP19.38■□□□□ 0.69
FDPS-220ENST00000611010 PLA2R1Q13018 1463 aa19.37■□□□□ 0.69
FDPS-220ENST00000611010 SPAG9O60271 1321 aaKnown RBP19.37■□□□□ 0.69
FDPS-220ENST00000611010 ESF1Q9H501 851 aaKnown RBP19.36■□□□□ 0.69
FDPS-220ENST00000611010 PLEKHH2Q8IVE3 1493 aa19.35■□□□□ 0.69
FDPS-220ENST00000611010 POLR1AO95602 1720 aaPredicted RBP19.35■□□□□ 0.69
FDPS-220ENST00000611010 DNMT1P26358 1616 aaKnown RBP19.34■□□□□ 0.69
FDPS-220ENST00000611010 MBD5Q9P267 1494 aa19.34■□□□□ 0.69
FDPS-220ENST00000611010 ZNF335Q9H4Z2 1342 aaPredicted RBP19.33■□□□□ 0.69
FDPS-220ENST00000611010 NEURL4Q96JN8 1562 aa19.33■□□□□ 0.69
FDPS-220ENST00000611010 EHBP1L1Q8N3D4 1523 aa19.33■□□□□ 0.68
FDPS-220ENST00000611010 NCKAP5LQ9HCH0 1330 aa19.32■□□□□ 0.68
FDPS-220ENST00000611010 CCNB3Q8WWL7 1395 aa19.31■□□□□ 0.68
FDPS-220ENST00000611010 ZNF644Q9H582 1327 aaPredicted RBP19.29■□□□□ 0.68
FDPS-220ENST00000611010 SOCS7O14512 581 aa19.29■□□□□ 0.68
FDPS-220ENST00000611010 CFDP1Q9UEE9 299 aaPredicted RBP19.28■□□□□ 0.68
FDPS-220ENST00000611010 A2ML1A8K2U0 1454 aa19.27■□□□□ 0.67
FDPS-220ENST00000611010 MTUS2Q5JR59 1369 aa19.26■□□□□ 0.67
FDPS-220ENST00000611010 GGT6Q6P531 493 aa19.24■□□□□ 0.67
FDPS-220ENST00000611010 CEP162Q5TB80 1403 aa19.24■□□□□ 0.67
FDPS-220ENST00000611010 KDM5DQ9BY66 1539 aa19.23■□□□□ 0.67
FDPS-220ENST00000611010 RTEL1-TNFRSF6BF6WH68 1400 aa19.23■□□□□ 0.67
FDPS-220ENST00000611010 CAMSAP2Q08AD1 1489 aa19.22■□□□□ 0.67
FDPS-220ENST00000611010 ALKQ9UM73 1620 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms