RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 TSPY10P0CW01 314 aa8.96□□□□□ -0.97
CNKSR3-205ENST00000607772 NEUROD2Q15784 382 aa8.96□□□□□ -0.98
CNKSR3-205ENST00000607772 ZNF318Q5VUA4 2279 aa8.95□□□□□ -0.98
CNKSR3-205ENST00000607772 ZCCHC6Q5VYS8 1495 aaKnown RBP8.95□□□□□ -0.98
CNKSR3-205ENST00000607772 PLCB2Q00722 1185 aa8.95□□□□□ -0.98
CNKSR3-205ENST00000607772 DRC7Q8IY82 874 aa8.95□□□□□ -0.98
CNKSR3-205ENST00000607772 CC2D1BQ5T0F9 858 aaKnown RBP8.94□□□□□ -0.98
CNKSR3-205ENST00000607772 TEX35Q5T0J7 233 aa8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 TPM2P07951 284 aa8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 FTSJ3Q8IY81 847 aaKnown RBP8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 FAM13BQ9NYF5 915 aa8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 SYAP1Q96A49 352 aaPredicted RBP8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 GSE1Q14687 1217 aa8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 NOM1Q5C9Z4 860 aaKnown RBP8.93□□□□□ -0.98
CNKSR3-205ENST00000607772 GZF1Q9H116 711 aaPredicted RBP8.92□□□□□ -0.98
CNKSR3-205ENST00000607772 CEP162Q5TB80 1403 aa8.92□□□□□ -0.98
CNKSR3-205ENST00000607772 KNSTRNQ9Y448 316 aa8.92□□□□□ -0.98
CNKSR3-205ENST00000607772 CCDC66A2RUB6 948 aa8.92□□□□□ -0.98
CNKSR3-205ENST00000607772 TCERG1O14776 1098 aaKnown RBP8.92□□□□□ -0.98
CNKSR3-205ENST00000607772 FRAT1Q92837 279 aaPredicted RBP8.92□□□□□ -0.98
CNKSR3-205ENST00000607772 NPM1P06748 294 aaKnown RBP eCLIP8.91□□□□□ -0.98
CNKSR3-205ENST00000607772 CSPP1Q1MSJ5 1256 aa8.91□□□□□ -0.98
CNKSR3-205ENST00000607772 DDX11L8A8MPP1 907 aa8.91□□□□□ -0.98
CNKSR3-205ENST00000607772 CHMP7Q8WUX9 453 aaPredicted RBP8.91□□□□□ -0.98
CNKSR3-205ENST00000607772 PHF14O94880 888 aa8.91□□□□□ -0.98
CNKSR3-205ENST00000607772 GPS2Q13227 327 aa8.91□□□□□ -0.98
CNKSR3-205ENST00000607772 MYO9BQ13459 2157 aa8.9□□□□□ -0.98
CNKSR3-205ENST00000607772 ICE1Q9Y2F5 2266 aa8.9□□□□□ -0.98
CNKSR3-205ENST00000607772 MYH9P35579 1960 aaKnown RBP8.9□□□□□ -0.98
CNKSR3-205ENST00000607772 FAM43AQ8N2R8 423 aa8.9□□□□□ -0.99
CNKSR3-205ENST00000607772 CARD11Q9BXL7 1154 aa8.89□□□□□ -0.99
CNKSR3-205ENST00000607772 SLKQ9H2G2 1235 aaPredicted RBP8.89□□□□□ -0.99
CNKSR3-205ENST00000607772 HTATSF1O43719 755 aaKnown RBP8.89□□□□□ -0.99
CNKSR3-205ENST00000607772 PPP1R15AO75807 674 aaPredicted RBP8.88□□□□□ -0.99
CNKSR3-205ENST00000607772 GOLGA6L4A6NEF3 574 aa8.88□□□□□ -0.99
CNKSR3-205ENST00000607772 CWC15Q9P013 229 aaKnown RBP8.87□□□□□ -0.99
CNKSR3-205ENST00000607772 NAP1L2Q9ULW6 460 aaPredicted RBP8.87□□□□□ -0.99
CNKSR3-205ENST00000607772 GOLGA3Q08378 1498 aa8.86□□□□□ -0.99
CNKSR3-205ENST00000607772 CCER2I3L3R5 266 aa8.86□□□□□ -0.99
CNKSR3-205ENST00000607772 FOXD1Q16676 465 aa8.85□□□□□ -0.99
CNKSR3-205ENST00000607772 CFAP53Q96M91 514 aa8.85□□□□□ -0.99
CNKSR3-205ENST00000607772 LMOD2Q6P5Q4 547 aa8.84□□□□□ -0.99
CNKSR3-205ENST00000607772 PLEKHD1A6NEE1 506 aa8.84□□□□□ -0.99
CNKSR3-205ENST00000607772 U2SURPO15042 1029 aaKnown RBP8.84□□□□□ -0.99
CNKSR3-205ENST00000607772 AK9Q5TCS8 1911 aa8.84□□□□□ -0.99
CNKSR3-205ENST00000607772 CFAP44Q96MT7 982 aa8.84□□□□□ -0.99
CNKSR3-205ENST00000607772 NOC3LQ8WTT2 800 aaKnown RBP8.83□□□□□ -1
CNKSR3-205ENST00000607772 EEA1Q15075 1411 aa8.83□□□□□ -1
CNKSR3-205ENST00000607772 SKOR2Q2VWA4 1001 aaPredicted RBP8.83□□□□□ -1
CNKSR3-205ENST00000607772 KCNJ4P48050 445 aa8.83□□□□□ -1
CNKSR3-205ENST00000607772 OS9Q13438 667 aaPredicted RBP8.82□□□□□ -1
CNKSR3-205ENST00000607772 KAT6AQ92794 2004 aa8.82□□□□□ -1
CNKSR3-205ENST00000607772 CALD1Q05682 793 aaKnown RBP8.82□□□□□ -1
CNKSR3-205ENST00000607772 SOX12O15370 315 aa8.82□□□□□ -1
CNKSR3-205ENST00000607772 RSF1Q96T23 1441 aaPredicted RBP8.82□□□□□ -1
CNKSR3-205ENST00000607772 POGKQ9P215 609 aa8.81□□□□□ -1
CNKSR3-205ENST00000607772 PATL2C9JE40 543 aaKnown RBP8.81□□□□□ -1
CNKSR3-205ENST00000607772 ARID1AO14497 2285 aa8.81□□□□□ -1
CNKSR3-205ENST00000607772 CHMP4BQ9H444 224 aaKnown RBP8.81□□□□□ -1
CNKSR3-205ENST00000607772 MS4A1P11836 297 aa8.81□□□□□ -1
CNKSR3-205ENST00000607772 CFDP1Q9UEE9 299 aaPredicted RBP8.8□□□□□ -1
CNKSR3-205ENST00000607772 TAF7LQ5H9L4 462 aa8.8□□□□□ -1
CNKSR3-205ENST00000607772 FGD1P98174 961 aa8.8□□□□□ -1
CNKSR3-205ENST00000607772 SAFB2Q14151 953 aaKnown RBP eCLIP8.8□□□□□ -1
CNKSR3-205ENST00000607772 IL27Q8NEV9 243 aa8.8□□□□□ -1
CNKSR3-205ENST00000607772 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
CNKSR3-205ENST00000607772 APBB1O00213 710 aa8.8□□□□□ -1
CNKSR3-205ENST00000607772 HSPA5P11021 654 aaKnown RBP8.79□□□□□ -1
CNKSR3-205ENST00000607772 HAP1P54257 671 aaPredicted RBP8.79□□□□□ -1
CNKSR3-205ENST00000607772 MAPK8IP3Q9UPT6 1336 aa8.78□□□□□ -1
CNKSR3-205ENST00000607772 TSPYL1Q9H0U9 437 aa8.77□□□□□ -1
CNKSR3-205ENST00000607772 TNIKQ9UKE5 1360 aa8.77□□□□□ -1
CNKSR3-205ENST00000607772 MCCP23508 829 aa8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 CDCA8Q53HL2 280 aa8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 ZMYND15Q9H091 742 aa8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 PDIA4P13667 645 aaKnown RBP8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 RDXP35241 583 aaKnown RBP8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 DCAF11Q8TEB1 546 aa8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 STK11IPQ8N1F8 1099 aa8.77□□□□□ -1.01
CNKSR3-205ENST00000607772 TPM4P67936 248 aa8.76□□□□□ -1.01
CNKSR3-205ENST00000607772 HMGN5P82970 282 aaKnown RBP8.76□□□□□ -1.01
CNKSR3-205ENST00000607772 STK26Q9P289 416 aa8.76□□□□□ -1.01
CNKSR3-205ENST00000607772 NUDCQ9Y266 331 aa8.76□□□□□ -1.01
CNKSR3-205ENST00000607772 EIF4G1Q04637 1599 aaKnown RBP8.76□□□□□ -1.01
CNKSR3-205ENST00000607772 DEF6Q9H4E7 631 aa8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 MORC1Q86VD1 984 aa8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 KIF16BQ96L93 1317 aa8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 KIF27Q86VH2 1401 aa8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 ARID1BQ8NFD5 2236 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 CCNB3Q8WWL7 1395 aa8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 KANK4Q5T7N3 995 aaPredicted RBP8.75□□□□□ -1.01
CNKSR3-205ENST00000607772 WRNQ14191 1432 aaPredicted RBP eCLIP8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 TCHHQ07283 1943 aa8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 RCAN3Q9UKA8 241 aa8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 DIAPH3Q9NSV4 1193 aa8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 MYH11P35749 1972 aa8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 FOXD4L5Q5VV16 416 aaPredicted RBP8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 FOXD4L4Q8WXT5 416 aaPredicted RBP8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 ACBD3Q9H3P7 528 aa8.74□□□□□ -1.01
CNKSR3-205ENST00000607772 FOXD4L1Q9NU39 408 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms