RNA–Protein interactions for RNA: ENST00000602171.5

FARP1-239, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 5

Gene FARP1, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-239ENST00000602171 MICALL2Q8IY33 904 aa13.45□□□□□ -0.26
FARP1-239ENST00000602171 STK24Q9Y6E0 443 aa13.45□□□□□ -0.26
FARP1-239ENST00000602171 MARVELD3Q96A59 401 aa13.44□□□□□ -0.26
FARP1-239ENST00000602171 STK25O00506 426 aa13.43□□□□□ -0.26
FARP1-239ENST00000602171 EMP3P54852 163 aa13.43□□□□□ -0.26
FARP1-239ENST00000602171 DOK7Q18PE1 504 aa13.43□□□□□ -0.26
FARP1-239ENST00000602171 PKD2Q13563 968 aa13.42□□□□□ -0.26
FARP1-239ENST00000602171 MS4A4AQ96JQ5 239 aa13.42□□□□□ -0.26
FARP1-239ENST00000602171 SMARCA4P51532 1647 aa13.4□□□□□ -0.26
FARP1-239ENST00000602171 ZNF710Q8N1W2 664 aa13.4□□□□□ -0.26
FARP1-239ENST00000602171 CC2D2AQ9P2K1 1620 aa13.39□□□□□ -0.27
FARP1-239ENST00000602171 RIMBP2O15034 1052 aa13.39□□□□□ -0.27
FARP1-239ENST00000602171 HOXB3P14651 431 aaPredicted RBP13.38□□□□□ -0.27
FARP1-239ENST00000602171 FBXO22Q8NEZ5 403 aa13.36□□□□□ -0.27
FARP1-239ENST00000602171 RGL2O15211 777 aa13.35□□□□□ -0.27
FARP1-239ENST00000602171 MROH2BQ7Z745 1585 aa13.34□□□□□ -0.27
FARP1-239ENST00000602171 SMARCA2P51531 1590 aa13.33□□□□□ -0.28
FARP1-239ENST00000602171 HOXB1P14653 301 aaPredicted RBP13.33□□□□□ -0.28
FARP1-239ENST00000602171 MFRPQ9BY79 579 aa13.32□□□□□ -0.28
FARP1-239ENST00000602171 ATAD2BQ9ULI0 1458 aa13.31□□□□□ -0.28
FARP1-239ENST00000602171 FAM205CA6NFA0 338 aa13.31□□□□□ -0.28
FARP1-239ENST00000602171 ZSWIM6Q9HCJ5 1215 aa13.31□□□□□ -0.28
FARP1-239ENST00000602171 RSF1Q96T23 1441 aaPredicted RBP13.3□□□□□ -0.28
FARP1-239ENST00000602171 TMEM92Q6UXU6 159 aa13.3□□□□□ -0.28
FARP1-239ENST00000602171 HS3ST6Q96QI5 342 aa13.3□□□□□ -0.28
FARP1-239ENST00000602171 NCAPD3P42695 1498 aa13.29□□□□□ -0.28
FARP1-239ENST00000602171 PEG3Q9GZU2 1588 aa13.28□□□□□ -0.28
FARP1-239ENST00000602171 BAZ1BQ9UIG0 1483 aaKnown RBP13.23□□□□□ -0.29
FARP1-239ENST00000602171 HMGXB3Q12766 1538 aa13.23□□□□□ -0.29
FARP1-239ENST00000602171 ERBB3P21860 1342 aa13.22□□□□□ -0.29
FARP1-239ENST00000602171 SPNS2Q8IVW8 549 aa13.21□□□□□ -0.29
FARP1-239ENST00000602171 POTEB3A0JP26 581 aa13.2□□□□□ -0.3
FARP1-239ENST00000602171 POTEBQ6S5H4 581 aa13.2□□□□□ -0.3
FARP1-239ENST00000602171 WIZO95785 1651 aa13.19□□□□□ -0.3
FARP1-239ENST00000602171 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
FARP1-239ENST00000602171 GPR153Q6NV75 609 aa13.16□□□□□ -0.3
FARP1-239ENST00000602171 HS6ST3Q8IZP7 471 aa13.16□□□□□ -0.3
FARP1-239ENST00000602171 KRTAP3-3Q9BYR6 98 aa13.15□□□□□ -0.3
FARP1-239ENST00000602171 KRTAP3-2Q9BYR7 98 aa13.15□□□□□ -0.3
FARP1-239ENST00000602171 SUPT5HO00267 1087 aaKnown RBP13.14□□□□□ -0.31
FARP1-239ENST00000602171 KIF3CO14782 793 aa13.14□□□□□ -0.31
FARP1-239ENST00000602171 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FARP1-239ENST00000602171 C2orf72A6NCS6 295 aa13.11□□□□□ -0.31
FARP1-239ENST00000602171 VARS2Q5ST30 1063 aaKnown RBP13.11□□□□□ -0.31
FARP1-239ENST00000602171 TOP2AP11388 1531 aaKnown RBP13.11□□□□□ -0.31
FARP1-239ENST00000602171 ARSIQ5FYB1 569 aa13.08□□□□□ -0.32
FARP1-239ENST00000602171 CHGAP10645 457 aaKnown RBP13.07□□□□□ -0.32
FARP1-239ENST00000602171 ZNF687Q8N1G0 1237 aa13.07□□□□□ -0.32
FARP1-239ENST00000602171 RYDENQ9NUL5 291 aaKnown RBP13.06□□□□□ -0.32
FARP1-239ENST00000602171 PPP1R37O75864 691 aa13.05□□□□□ -0.32
FARP1-239ENST00000602171 SLC34A2O95436 690 aa13.05□□□□□ -0.32
FARP1-239ENST00000602171 DNAJC5Q9H3Z4 198 aa13.03□□□□□ -0.32
FARP1-239ENST00000602171 ZNF316A6NFI3 1004 aaPredicted RBP13.01□□□□□ -0.33
FARP1-239ENST00000602171 PCDHGA4Q9Y5G9 962 aa12.97□□□□□ -0.33
FARP1-239ENST00000602171 KHSRPQ92945 711 aaKnown RBP eCLIP12.96□□□□□ -0.33
FARP1-239ENST00000602171 CCDC88BA6NC98 1476 aa12.96□□□□□ -0.34
FARP1-239ENST00000602171 FOXK1P85037 733 aa12.94□□□□□ -0.34
FARP1-239ENST00000602171 GPHNQ9NQX3 736 aaPredicted RBP12.94□□□□□ -0.34
FARP1-239ENST00000602171 CADPSQ9ULU8 1353 aa12.94□□□□□ -0.34
FARP1-239ENST00000602171 NUDT7P0C024 238 aa12.93□□□□□ -0.34
FARP1-239ENST00000602171 PTGER2P43116 358 aa12.92□□□□□ -0.34
FARP1-239ENST00000602171 LAMC3Q9Y6N6 1575 aa12.91□□□□□ -0.34
FARP1-239ENST00000602171 PSDA5PKW4 1024 aaPredicted RBP12.9□□□□□ -0.34
FARP1-239ENST00000602171 PBX2P40425 430 aa12.9□□□□□ -0.34
FARP1-239ENST00000602171 PTCD2Q8WV60 388 aaKnown RBP12.89□□□□□ -0.35
FARP1-239ENST00000602171 NKX1-1Q15270 411 aaPredicted RBP12.88□□□□□ -0.35
FARP1-239ENST00000602171 PLPP6Q8IY26 295 aa12.88□□□□□ -0.35
FARP1-239ENST00000602171 CFTRP13569 1480 aa12.88□□□□□ -0.35
FARP1-239ENST00000602171 TBC1D12O60347 775 aa12.87□□□□□ -0.35
FARP1-239ENST00000602171 LHX6Q9UPM6 363 aa12.87□□□□□ -0.35
FARP1-239ENST00000602171 PDS5BQ9NTI5 1447 aa12.87□□□□□ -0.35
FARP1-239ENST00000602171 RNF166Q96A37 237 aaPredicted RBP12.85□□□□□ -0.35
FARP1-239ENST00000602171 MYT1LQ9UL68 1186 aa12.85□□□□□ -0.35
FARP1-239ENST00000602171 NESP48681 1621 aa12.84□□□□□ -0.35
FARP1-239ENST00000602171 ANKRD13DQ6ZTN6 518 aa12.84□□□□□ -0.35
FARP1-239ENST00000602171 LSM11P83369 360 aaKnown RBP eCLIP12.83□□□□□ -0.36
FARP1-239ENST00000602171 DSG2Q14126 1118 aa12.83□□□□□ -0.36
FARP1-239ENST00000602171 ERCC6Q03468 1493 aa12.82□□□□□ -0.36
FARP1-239ENST00000602171 KDM4FA0A1W2PPD8 638 aa12.78□□□□□ -0.36
FARP1-239ENST00000602171 PDE4AP27815 886 aa12.77□□□□□ -0.37
FARP1-239ENST00000602171 CRISPLD2Q9H0B8 497 aa12.77□□□□□ -0.37
FARP1-239ENST00000602171 FANCD2Q9BXW9 1451 aa12.77□□□□□ -0.37
FARP1-239ENST00000602171 ARHGAP33O14559 1287 aa12.75□□□□□ -0.37
FARP1-239ENST00000602171 GTPBP6O43824 516 aaPredicted RBP12.75□□□□□ -0.37
FARP1-239ENST00000602171 CEP164Q9UPV0 1460 aa12.74□□□□□ -0.37
FARP1-239ENST00000602171 PPP4R3BQ5MIZ7 849 aa12.73□□□□□ -0.37
FARP1-239ENST00000602171 PPP1R15BQ5SWA1 713 aa12.72□□□□□ -0.37
FARP1-239ENST00000602171 OXER1Q8TDS5 423 aa12.71□□□□□ -0.37
FARP1-239ENST00000602171 AXIN2Q9Y2T1 843 aa12.71□□□□□ -0.37
FARP1-239ENST00000602171 PRDM2Q13029 1718 aa12.71□□□□□ -0.38
FARP1-239ENST00000602171 POTEEQ6S8J3 1075 aa12.7□□□□□ -0.38
FARP1-239ENST00000602171 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FARP1-239ENST00000602171 MRC2Q9UBG0 1479 aa12.67□□□□□ -0.38
FARP1-239ENST00000602171 KIF21AQ7Z4S6 1674 aa12.67□□□□□ -0.38
FARP1-239ENST00000602171 NCKAP5LQ9HCH0 1330 aa12.66□□□□□ -0.38
FARP1-239ENST00000602171 TK2O00142 265 aa12.66□□□□□ -0.38
FARP1-239ENST00000602171 ABCC8Q09428 1581 aa12.65□□□□□ -0.38
FARP1-239ENST00000602171 ADGRD1Q6QNK2 874 aa12.65□□□□□ -0.38
FARP1-239ENST00000602171 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
FARP1-239ENST00000602171 DDX27Q96GQ7 796 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms