RNA–Protein interactions for RNA: ENST00000592771.5

RANBP3-229, Transcript of RAN binding protein 3, humanhuman

TSL 1 (best)

Gene RANBP3, Length 1,937 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-229ENST00000592771 ROCK1Q13464 1354 aa20.67■□□□□ 0.9
RANBP3-229ENST00000592771 ABCC10Q5T3U5 1492 aa20.66■□□□□ 0.9
RANBP3-229ENST00000592771 ABCC5O15440 1437 aa20.66■□□□□ 0.9
RANBP3-229ENST00000592771 ERCC6L2Q5T890 1561 aa20.65■□□□□ 0.9
RANBP3-229ENST00000592771 CAMSAP2Q08AD1 1489 aa20.64■□□□□ 0.89
RANBP3-229ENST00000592771 PLEKHD1A6NEE1 506 aa20.63■□□□□ 0.89
RANBP3-229ENST00000592771 CDC42BPAQ5VT25 1732 aa20.63■□□□□ 0.89
RANBP3-229ENST00000592771 TIMELESSQ9UNS1 1208 aa20.61■□□□□ 0.89
RANBP3-229ENST00000592771 ZNF644Q9H582 1327 aaPredicted RBP20.61■□□□□ 0.89
RANBP3-229ENST00000592771 KDM6BO15054 1643 aa20.6■□□□□ 0.89
RANBP3-229ENST00000592771 RRP7BPQ9NSQ0 103 aa20.6■□□□□ 0.89
RANBP3-229ENST00000592771 ABCC2Q92887 1545 aa20.59■□□□□ 0.89
RANBP3-229ENST00000592771 CFDP1Q9UEE9 299 aaPredicted RBP20.59■□□□□ 0.89
RANBP3-229ENST00000592771 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
RANBP3-229ENST00000592771 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.89
RANBP3-229ENST00000592771 SIN3AQ96ST3 1273 aa20.57■□□□□ 0.88
RANBP3-229ENST00000592771 ADGBQ8N7X0 1667 aa20.55■□□□□ 0.88
RANBP3-229ENST00000592771 ADGRL2O95490 1459 aa20.55■□□□□ 0.88
RANBP3-229ENST00000592771 UHRF1BP1LA0JNW5 1464 aa20.53■□□□□ 0.88
RANBP3-229ENST00000592771 DENND4BO75064 1496 aaPredicted RBP20.53■□□□□ 0.88
RANBP3-229ENST00000592771 YTHDC1Q96MU7 727 aaKnown RBP20.51■□□□□ 0.87
RANBP3-229ENST00000592771 PREX2Q70Z35 1606 aa20.5■□□□□ 0.87
RANBP3-229ENST00000592771 SHANK2Q9UPX8 1470 aa20.5■□□□□ 0.87
RANBP3-229ENST00000592771 NCOA1Q15788 1441 aa20.49■□□□□ 0.87
RANBP3-229ENST00000592771 CDC42BPBQ9Y5S2 1711 aa20.47■□□□□ 0.87
RANBP3-229ENST00000592771 ARHGEF5Q12774 1597 aa20.47■□□□□ 0.87
RANBP3-229ENST00000592771 KDM5BQ9UGL1 1544 aa20.46■□□□□ 0.87
RANBP3-229ENST00000592771 ZCCHC11Q5TAX3 1644 aaKnown RBP20.44■□□□□ 0.86
RANBP3-229ENST00000592771 ZNF777Q9ULD5 760 aaPredicted RBP20.44■□□□□ 0.86
RANBP3-229ENST00000592771 TTC37Q6PGP7 1564 aa20.43■□□□□ 0.86
RANBP3-229ENST00000592771 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.43■□□□□ 0.867e-8■□□□□ 9
RANBP3-229ENST00000592771 PPP1R15AO75807 674 aaPredicted RBP20.43■□□□□ 0.86
RANBP3-229ENST00000592771 SAMD9LQ8IVG5 1584 aa20.43■□□□□ 0.86
RANBP3-229ENST00000592771 MBD5Q9P267 1494 aa20.42■□□□□ 0.86
RANBP3-229ENST00000592771 ANKRD30AQ9BXX3 1397 aa20.41■□□□□ 0.86
RANBP3-229ENST00000592771 TRIM52Q96A61 297 aa20.41■□□□□ 0.86
RANBP3-229ENST00000592771 MPHOSPH9Q99550 1183 aa20.41■□□□□ 0.86
RANBP3-229ENST00000592771 TONSLQ96HA7 1378 aa20.4■□□□□ 0.86
RANBP3-229ENST00000592771 C9orf84Q5VXU9 1444 aa20.39■□□□□ 0.85
RANBP3-229ENST00000592771 MYO5CQ9NQX4 1742 aa20.38■□□□□ 0.85
RANBP3-229ENST00000592771 PZPP20742 1482 aa20.36■□□□□ 0.85
RANBP3-229ENST00000592771 CCDC141Q6ZP82 1450 aa20.35■□□□□ 0.85
RANBP3-229ENST00000592771 ANKRD50Q9ULJ7 1429 aa20.34■□□□□ 0.85
RANBP3-229ENST00000592771 ANKRD30BQ9BXX2 1392 aa20.34■□□□□ 0.85
RANBP3-229ENST00000592771 RSPH4AQ5TD94 716 aa20.33■□□□□ 0.85
RANBP3-229ENST00000592771 ARHGAP5Q13017 1502 aa20.33■□□□□ 0.84
RANBP3-229ENST00000592771 MAST1Q9Y2H9 1570 aa20.33■□□□□ 0.84
RANBP3-229ENST00000592771 KIAA1107Q9UPP5 1409 aa20.31■□□□□ 0.84
RANBP3-229ENST00000592771 PLEKHH2Q8IVE3 1493 aa20.31■□□□□ 0.84
RANBP3-229ENST00000592771 SYCP2Q9BX26 1530 aa20.3■□□□□ 0.84
RANBP3-229ENST00000592771 TSPY4P0CV99 314 aa20.3■□□□□ 0.84
RANBP3-229ENST00000592771 TSPY10P0CW01 314 aa20.3■□□□□ 0.84
RANBP3-229ENST00000592771 HNRNPMP52272 730 aaKnown RBP eCLIP20.3■□□□□ 0.847e-7■■■□□ 15.5
RANBP3-229ENST00000592771 KDM5DQ9BY66 1539 aa20.3■□□□□ 0.84
RANBP3-229ENST00000592771 PLCH2O75038 1416 aa20.29■□□□□ 0.84
RANBP3-229ENST00000592771 RPRD2Q5VT52 1461 aaKnown RBP20.28■□□□□ 0.84
RANBP3-229ENST00000592771 MYT1Q01538 1121 aa20.28■□□□□ 0.84
RANBP3-229ENST00000592771 CYB5RLQ6IPT4 315 aa20.27■□□□□ 0.84
RANBP3-229ENST00000592771 ARAP3Q8WWN8 1544 aa20.27■□□□□ 0.84
RANBP3-229ENST00000592771 SLC4A1APQ9BWU0 796 aaKnown RBP20.27■□□□□ 0.84
RANBP3-229ENST00000592771 KIF15Q9NS87 1388 aa20.27■□□□□ 0.84
RANBP3-229ENST00000592771 RIMBP3CA6NJZ7 1639 aa20.26■□□□□ 0.83
RANBP3-229ENST00000592771 RIMBP3BA6NNM3 1639 aa20.26■□□□□ 0.83
RANBP3-229ENST00000592771 RIMBP3Q9UFD9 1639 aa20.26■□□□□ 0.83
RANBP3-229ENST00000592771 DNAJC5Q9H3Z4 198 aa20.25■□□□□ 0.83
RANBP3-229ENST00000592771 PLXNC1O60486 1568 aa20.24■□□□□ 0.83
RANBP3-229ENST00000592771 FOXD1Q16676 465 aa20.23■□□□□ 0.83
RANBP3-229ENST00000592771 WDR7Q9Y4E6 1490 aa20.23■□□□□ 0.83
RANBP3-229ENST00000592771 KCNH8Q96L42 1107 aa20.23■□□□□ 0.83
RANBP3-229ENST00000592771 TEX14Q8IWB6 1497 aa20.22■□□□□ 0.83
RANBP3-229ENST00000592771 ABCC1P33527 1531 aa20.22■□□□□ 0.83
RANBP3-229ENST00000592771 ARHGEF12Q9NZN5 1544 aa20.22■□□□□ 0.83
RANBP3-229ENST00000592771 EFCAB2Q5VUJ9 269 aa20.18■□□□□ 0.82
RANBP3-229ENST00000592771 ABCA9Q8IUA7 1624 aa20.18■□□□□ 0.82
RANBP3-229ENST00000592771 L3MBTL2Q969R5 705 aa20.17■□□□□ 0.82
RANBP3-229ENST00000592771 NUP155O75694 1391 aa20.16■□□□□ 0.82
RANBP3-229ENST00000592771 UNC13BO14795 1591 aa20.15■□□□□ 0.82
RANBP3-229ENST00000592771 NPM1P06748 294 aaKnown RBP eCLIP20.14■□□□□ 0.81
RANBP3-229ENST00000592771 PKD2Q13563 968 aa20.14■□□□□ 0.81
RANBP3-229ENST00000592771 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
RANBP3-229ENST00000592771 ASXL2Q76L83 1435 aa20.12■□□□□ 0.81
RANBP3-229ENST00000592771 FAM135AQ9P2D6 1515 aa20.11■□□□□ 0.81
RANBP3-229ENST00000592771 TRAPPC8Q9Y2L5 1435 aa20.1■□□□□ 0.81
RANBP3-229ENST00000592771 ERBINQ96RT1 1412 aa20.09■□□□□ 0.81
RANBP3-229ENST00000592771 MAGI2Q86UL8 1455 aa20.08■□□□□ 0.81
RANBP3-229ENST00000592771 SUPT16HQ9Y5B9 1047 aaKnown RBP20.08■□□□□ 0.81
RANBP3-229ENST00000592771 RTEL1-TNFRSF6BF6WH68 1400 aa20.08■□□□□ 0.8
RANBP3-229ENST00000592771 IQGAP3Q86VI3 1631 aa20.07■□□□□ 0.8
RANBP3-229ENST00000592771 ZFYVE16Q7Z3T8 1539 aa20.05■□□□□ 0.8
RANBP3-229ENST00000592771 FANCAO15360 1455 aa20.05■□□□□ 0.8
RANBP3-229ENST00000592771 HIRIP3Q9BW71 556 aaPredicted RBP20.04■□□□□ 0.8
RANBP3-229ENST00000592771 CCER2I3L3R5 266 aa20.04■□□□□ 0.8
RANBP3-229ENST00000592771 NBPF8Q3BBV2 869 aa20.04■□□□□ 0.8
RANBP3-229ENST00000592771 DDX10Q13206 875 aaKnown RBP20.02■□□□□ 0.8
RANBP3-229ENST00000592771 INO80Q9ULG1 1556 aaPredicted RBP20.02■□□□□ 0.79
RANBP3-229ENST00000592771 HSPA5P11021 654 aaKnown RBP20■□□□□ 0.79
RANBP3-229ENST00000592771 EIF4G2P78344 907 aaKnown RBP eCLIP19.99■□□□□ 0.79
RANBP3-229ENST00000592771 UHRF1BP1Q6BDS2 1440 aa19.99■□□□□ 0.79
RANBP3-229ENST00000592771 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
RANBP3-229ENST00000592771 ADGRL1O94910 1474 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms