RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 CAMSAP2Q08AD1 1489 aa20.21■□□□□ 0.83
RNF43-202ENST00000577625 NAIPQ13075 1403 aa20.21■□□□□ 0.83
RNF43-202ENST00000577625 MAPKBP1O60336 1514 aa20.2■□□□□ 0.82
RNF43-202ENST00000577625 AKNAQ7Z591 1439 aa20.19■□□□□ 0.82
RNF43-202ENST00000577625 ZNF644Q9H582 1327 aaPredicted RBP20.19■□□□□ 0.82
RNF43-202ENST00000577625 DAPK1P53355 1430 aa20.19■□□□□ 0.82
RNF43-202ENST00000577625 KDM5BQ9UGL1 1544 aa20.18■□□□□ 0.82
RNF43-202ENST00000577625 OSCARQ8IYS5 282 aa20.17■□□□□ 0.82
RNF43-202ENST00000577625 CFDP1Q9UEE9 299 aaPredicted RBP20.17■□□□□ 0.82
RNF43-202ENST00000577625 CROCC2H7BZ55 1655 aa20.16■□□□□ 0.82
RNF43-202ENST00000577625 ABCC5O15440 1437 aa20.16■□□□□ 0.82
RNF43-202ENST00000577625 PREX2Q70Z35 1606 aa20.15■□□□□ 0.82
RNF43-202ENST00000577625 CDC42BPBQ9Y5S2 1711 aa20.15■□□□□ 0.82
RNF43-202ENST00000577625 TTC37Q6PGP7 1564 aa20.14■□□□□ 0.81
RNF43-202ENST00000577625 CHIC2Q9UKJ5 165 aa20.13■□□□□ 0.81
RNF43-202ENST00000577625 ADGBQ8N7X0 1667 aa20.12■□□□□ 0.81
RNF43-202ENST00000577625 DIEXFQ68CQ4 756 aaKnown RBP20.12■□□□□ 0.81
RNF43-202ENST00000577625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.11■□□□□ 0.81
RNF43-202ENST00000577625 KDM6BO15054 1643 aa20.1■□□□□ 0.81
RNF43-202ENST00000577625 ROCK1Q13464 1354 aa20.1■□□□□ 0.81
RNF43-202ENST00000577625 RRP7BPQ9NSQ0 103 aa20.1■□□□□ 0.81
RNF43-202ENST00000577625 MYO5CQ9NQX4 1742 aa20.09■□□□□ 0.81
RNF43-202ENST00000577625 ZNF777Q9ULD5 760 aaPredicted RBP20.07■□□□□ 0.8
RNF43-202ENST00000577625 SAMD9LQ8IVG5 1584 aa20.06■□□□□ 0.8
RNF43-202ENST00000577625 ADGRL2O95490 1459 aa20.04■□□□□ 0.8
RNF43-202ENST00000577625 ARHGEF5Q12774 1597 aa20.04■□□□□ 0.8
RNF43-202ENST00000577625 SHANK2Q9UPX8 1470 aa20.02■□□□□ 0.8
RNF43-202ENST00000577625 ARHGAP5Q13017 1502 aa20.01■□□□□ 0.79
RNF43-202ENST00000577625 BCL11AQ9H165 835 aa20■□□□□ 0.79
RNF43-202ENST00000577625 NCOA1Q15788 1441 aa19.99■□□□□ 0.79
RNF43-202ENST00000577625 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
RNF43-202ENST00000577625 WDR7Q9Y4E6 1490 aa19.98■□□□□ 0.79
RNF43-202ENST00000577625 KCNH8Q96L42 1107 aa19.98■□□□□ 0.79
RNF43-202ENST00000577625 C9orf84Q5VXU9 1444 aa19.96■□□□□ 0.79
RNF43-202ENST00000577625 SYCP2Q9BX26 1530 aa19.96■□□□□ 0.79
RNF43-202ENST00000577625 CCDC141Q6ZP82 1450 aa19.95■□□□□ 0.78
RNF43-202ENST00000577625 DENND4BO75064 1496 aaPredicted RBP19.94■□□□□ 0.78
RNF43-202ENST00000577625 PLCH2O75038 1416 aa19.94■□□□□ 0.78
RNF43-202ENST00000577625 ANKRD30AQ9BXX3 1397 aa19.93■□□□□ 0.78
RNF43-202ENST00000577625 ZNF316A6NFI3 1004 aaPredicted RBP19.93■□□□□ 0.78
RNF43-202ENST00000577625 HNRNPMP52272 730 aaKnown RBP eCLIP19.93■□□□□ 0.788e-7■■■■□ 23.6
RNF43-202ENST00000577625 SIN3AQ96ST3 1273 aa19.92■□□□□ 0.78
RNF43-202ENST00000577625 ABCA9Q8IUA7 1624 aa19.92■□□□□ 0.78
RNF43-202ENST00000577625 ARAP3Q8WWN8 1544 aa19.91■□□□□ 0.78
RNF43-202ENST00000577625 PLEKHH2Q8IVE3 1493 aa19.91■□□□□ 0.78
RNF43-202ENST00000577625 ASXL2Q76L83 1435 aa19.9■□□□□ 0.78
RNF43-202ENST00000577625 MAST1Q9Y2H9 1570 aa19.9■□□□□ 0.78
RNF43-202ENST00000577625 KIAA1107Q9UPP5 1409 aa19.89■□□□□ 0.78
RNF43-202ENST00000577625 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
RNF43-202ENST00000577625 ABCC1P33527 1531 aa19.88■□□□□ 0.77
RNF43-202ENST00000577625 ARHGEF12Q9NZN5 1544 aa19.87■□□□□ 0.77
RNF43-202ENST00000577625 TSPY4P0CV99 314 aa19.87■□□□□ 0.77
RNF43-202ENST00000577625 TSPY10P0CW01 314 aa19.87■□□□□ 0.77
RNF43-202ENST00000577625 TIMELESSQ9UNS1 1208 aa19.87■□□□□ 0.77
RNF43-202ENST00000577625 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
RNF43-202ENST00000577625 ANKRD50Q9ULJ7 1429 aa19.86■□□□□ 0.77
RNF43-202ENST00000577625 MPHOSPH9Q99550 1183 aa19.84■□□□□ 0.77
RNF43-202ENST00000577625 PLXNC1O60486 1568 aa19.83■□□□□ 0.77
RNF43-202ENST00000577625 EFCAB2Q5VUJ9 269 aa19.83■□□□□ 0.77
RNF43-202ENST00000577625 KIF15Q9NS87 1388 aa19.83■□□□□ 0.76
RNF43-202ENST00000577625 PZPP20742 1482 aa19.83■□□□□ 0.76
RNF43-202ENST00000577625 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
RNF43-202ENST00000577625 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
RNF43-202ENST00000577625 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
RNF43-202ENST00000577625 ANP32EQ9BTT0 268 aa19.81■□□□□ 0.76
RNF43-202ENST00000577625 NPM1P06748 294 aaKnown RBP eCLIP19.8■□□□□ 0.76
RNF43-202ENST00000577625 FANCAO15360 1455 aa19.78■□□□□ 0.76
RNF43-202ENST00000577625 KDM5DQ9BY66 1539 aa19.78■□□□□ 0.76
RNF43-202ENST00000577625 TRAPPC8Q9Y2L5 1435 aa19.77■□□□□ 0.76
RNF43-202ENST00000577625 TONSLQ96HA7 1378 aa19.75■□□□□ 0.75
RNF43-202ENST00000577625 SLC4A1APQ9BWU0 796 aaKnown RBP19.74■□□□□ 0.75
RNF43-202ENST00000577625 FOXD1Q16676 465 aa19.74■□□□□ 0.75
RNF43-202ENST00000577625 ANKRD30BQ9BXX2 1392 aa19.74■□□□□ 0.75
RNF43-202ENST00000577625 UNC13BO14795 1591 aa19.72■□□□□ 0.75
RNF43-202ENST00000577625 ZFYVE16Q7Z3T8 1539 aa19.71■□□□□ 0.75
RNF43-202ENST00000577625 DUOX2Q9NRD8 1548 aa19.71■□□□□ 0.75
RNF43-202ENST00000577625 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
RNF43-202ENST00000577625 ADGRL1O94910 1474 aa19.7■□□□□ 0.74
RNF43-202ENST00000577625 INO80Q9ULG1 1556 aaPredicted RBP19.69■□□□□ 0.74
RNF43-202ENST00000577625 CFAP74Q9C0B2 1584 aa19.69■□□□□ 0.74
RNF43-202ENST00000577625 NUP155O75694 1391 aa19.69■□□□□ 0.74
RNF43-202ENST00000577625 YTHDC1Q96MU7 727 aaKnown RBP19.68■□□□□ 0.74
RNF43-202ENST00000577625 RPRD2Q5VT52 1461 aaKnown RBP19.68■□□□□ 0.74
RNF43-202ENST00000577625 RTEL1-TNFRSF6BF6WH68 1400 aa19.67■□□□□ 0.74
RNF43-202ENST00000577625 CYB5RLQ6IPT4 315 aa19.67■□□□□ 0.74
RNF43-202ENST00000577625 CD109Q6YHK3 1445 aa19.66■□□□□ 0.74
RNF43-202ENST00000577625 ERBINQ96RT1 1412 aa19.66■□□□□ 0.74
RNF43-202ENST00000577625 FAM135AQ9P2D6 1515 aa19.65■□□□□ 0.74
RNF43-202ENST00000577625 ATP7AQ04656 1500 aa19.65■□□□□ 0.74
RNF43-202ENST00000577625 SCAPERQ9BY12 1400 aa19.65■□□□□ 0.74
RNF43-202ENST00000577625 AFAP1Q8N556 730 aa19.64■□□□□ 0.74
RNF43-202ENST00000577625 SPAG9O60271 1321 aaKnown RBP19.64■□□□□ 0.73
RNF43-202ENST00000577625 PKD2Q13563 968 aa19.64■□□□□ 0.73
RNF43-202ENST00000577625 IQGAP3Q86VI3 1631 aa19.64■□□□□ 0.73
RNF43-202ENST00000577625 MAGI2Q86UL8 1455 aa19.63■□□□□ 0.73
RNF43-202ENST00000577625 TEX14Q8IWB6 1497 aa19.62■□□□□ 0.73
RNF43-202ENST00000577625 MAP3K4Q9Y6R4 1608 aa19.61■□□□□ 0.73
RNF43-202ENST00000577625 KIDINS220Q9ULH0 1771 aa19.6■□□□□ 0.73
RNF43-202ENST00000577625 GLI2P10070 1586 aa19.58■□□□□ 0.72
RNF43-202ENST00000577625 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms