RNA–Protein interactions for RNA: ENST00000568651.1

HERPUD1-214, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 3

Gene HERPUD1, Length 458 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-214ENST00000568651 BMP2KQ9NSY1 1161 aaPredicted RBP12.76□□□□□ -0.37
HERPUD1-214ENST00000568651 TIMELESSQ9UNS1 1208 aa12.75□□□□□ -0.37
HERPUD1-214ENST00000568651 TRIM35Q9UPQ4 493 aa12.72□□□□□ -0.37
HERPUD1-214ENST00000568651 SPDYE16A6NNV3 312 aaPredicted RBP12.71□□□□□ -0.37
HERPUD1-214ENST00000568651 SLC24A3Q9HC58 644 aa12.71□□□□□ -0.37
HERPUD1-214ENST00000568651 BARGINQ6ZT62 677 aa12.7□□□□□ -0.38
HERPUD1-214ENST00000568651 MICALL2Q8IY33 904 aa12.68□□□□□ -0.38
HERPUD1-214ENST00000568651 FOXK1P85037 733 aa12.67□□□□□ -0.38
HERPUD1-214ENST00000568651 PDIA6Q15084 440 aa12.67□□□□□ -0.38
HERPUD1-214ENST00000568651 NEUROD2Q15784 382 aa12.67□□□□□ -0.38
HERPUD1-214ENST00000568651 IER5LQ5T953 404 aa12.65□□□□□ -0.38
HERPUD1-214ENST00000568651 PDCD7Q8N8D1 485 aaKnown RBP12.65□□□□□ -0.38
HERPUD1-214ENST00000568651 TMC2Q8TDI7 906 aa12.65□□□□□ -0.38
HERPUD1-214ENST00000568651 GALR2O43603 387 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-214ENST00000568651 DSG2Q14126 1118 aa12.64□□□□□ -0.39
HERPUD1-214ENST00000568651 GPIHBP1Q8IV16 184 aa12.64□□□□□ -0.39
HERPUD1-214ENST00000568651 TMEM121BQ9BXQ6 578 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-214ENST00000568651 DAXXQ9UER7 740 aaPredicted RBP12.64□□□□□ -0.39
HERPUD1-214ENST00000568651 EMILIN3Q9NT22 766 aa12.63□□□□□ -0.39
HERPUD1-214ENST00000568651 MLLT3P42568 568 aaPredicted RBP12.62□□□□□ -0.39
HERPUD1-214ENST00000568651 DPYSL4O14531 572 aa12.61□□□□□ -0.39
HERPUD1-214ENST00000568651 AK7Q96M32 723 aa12.61□□□□□ -0.39
HERPUD1-214ENST00000568651 NACADO15069 1562 aa12.6□□□□□ -0.39
HERPUD1-214ENST00000568651 IRX5P78411 483 aaPredicted RBP12.6□□□□□ -0.39
HERPUD1-214ENST00000568651 RBM26Q5T8P6 1007 aaKnown RBP12.6□□□□□ -0.39
HERPUD1-214ENST00000568651 DPY19L2Q6NUT2 758 aa12.6□□□□□ -0.39
HERPUD1-214ENST00000568651 OCEL1Q9H607 264 aa12.6□□□□□ -0.39
HERPUD1-214ENST00000568651 ASTLQ6HA08 431 aaPredicted RBP12.58□□□□□ -0.4
HERPUD1-214ENST00000568651 KIF3CO14782 793 aa12.57□□□□□ -0.4
HERPUD1-214ENST00000568651 BOLA1Q9Y3E2 137 aa12.57□□□□□ -0.4
HERPUD1-214ENST00000568651 ATN1P54259 1190 aaPredicted RBP12.56□□□□□ -0.4
HERPUD1-214ENST00000568651 ATMINO43313 823 aaPredicted RBP12.55□□□□□ -0.4
HERPUD1-214ENST00000568651 G3V3G9 751 aa12.54□□□□□ -0.4
HERPUD1-214ENST00000568651 PLPP6Q8IY26 295 aa12.54□□□□□ -0.4
HERPUD1-214ENST00000568651 C2orf72A6NCS6 295 aa12.51□□□□□ -0.41
HERPUD1-214ENST00000568651 HAX1O00165 279 aa12.51□□□□□ -0.41
HERPUD1-214ENST00000568651 C14orf37Q86TY3 774 aa12.51□□□□□ -0.41
HERPUD1-214ENST00000568651 L3MBTL3Q96JM7 780 aaPredicted RBP12.51□□□□□ -0.41
HERPUD1-214ENST00000568651 KRI1Q8N9T8 703 aaKnown RBP12.5□□□□□ -0.41
HERPUD1-214ENST00000568651 PLCG2P16885 1265 aa12.49□□□□□ -0.41
HERPUD1-214ENST00000568651 GPR37O15354 613 aa12.47□□□□□ -0.41
HERPUD1-214ENST00000568651 MAP3K9P80192 1104 aa12.46□□□□□ -0.41
HERPUD1-214ENST00000568651 BICRAQ9NZM4 1560 aa12.45□□□□□ -0.42
HERPUD1-214ENST00000568651 PTGER2P43116 358 aa12.45□□□□□ -0.42
HERPUD1-214ENST00000568651 TRIM66O15016 1216 aa12.44□□□□□ -0.42
HERPUD1-214ENST00000568651 OXER1Q8TDS5 423 aa12.43□□□□□ -0.42
HERPUD1-214ENST00000568651 EVX2Q03828 476 aa12.42□□□□□ -0.42
HERPUD1-214ENST00000568651 MINK1Q8N4C8 1332 aaPredicted RBP12.41□□□□□ -0.42
HERPUD1-214ENST00000568651 PDE4DQ08499 809 aa12.41□□□□□ -0.42
HERPUD1-214ENST00000568651 KDM4CQ9H3R0 1056 aa12.4□□□□□ -0.42
HERPUD1-214ENST00000568651 CECR2Q9BXF3 1484 aa12.4□□□□□ -0.43
HERPUD1-214ENST00000568651 MAP2K5Q13163 448 aa12.39□□□□□ -0.43
HERPUD1-214ENST00000568651 UNC13AQ9UPW8 1703 aa12.39□□□□□ -0.43
HERPUD1-214ENST00000568651 OSBPP22059 807 aa12.38□□□□□ -0.43
HERPUD1-214ENST00000568651 GPBP1L1Q9HC44 474 aaPredicted RBP12.38□□□□□ -0.43
HERPUD1-214ENST00000568651 GRXCR2A6NFK2 248 aa12.37□□□□□ -0.43
HERPUD1-214ENST00000568651 ARXQ96QS3 562 aa12.37□□□□□ -0.43
HERPUD1-214ENST00000568651 TBC1D12O60347 775 aa12.36□□□□□ -0.43
HERPUD1-214ENST00000568651 TMEM92Q6UXU6 159 aa12.35□□□□□ -0.43
HERPUD1-214ENST00000568651 NUTM2FA1L443 756 aa12.34□□□□□ -0.43
HERPUD1-214ENST00000568651 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
HERPUD1-214ENST00000568651 FCHSD2O94868 740 aa12.34□□□□□ -0.43
HERPUD1-214ENST00000568651 SEC24BO95487 1268 aa12.34□□□□□ -0.43
HERPUD1-214ENST00000568651 HIC1Q14526 733 aa12.34□□□□□ -0.43
HERPUD1-214ENST00000568651 GNPATO15228 680 aa12.33□□□□□ -0.44
HERPUD1-214ENST00000568651 AMHR2Q16671 573 aa12.33□□□□□ -0.44
HERPUD1-214ENST00000568651 UPF1Q92900 1129 aaKnown RBP eCLIP12.33□□□□□ -0.44
HERPUD1-214ENST00000568651 IRF6O14896 467 aa12.32□□□□□ -0.44
HERPUD1-214ENST00000568651 SLC39A7Q92504 469 aa12.32□□□□□ -0.44
HERPUD1-214ENST00000568651 CC2D2AQ9P2K1 1620 aa12.31□□□□□ -0.44
HERPUD1-214ENST00000568651 PTCD2Q8WV60 388 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-214ENST00000568651 GABBR2O75899 941 aa12.3□□□□□ -0.44
HERPUD1-214ENST00000568651 CCDC102AQ96A19 550 aa12.3□□□□□ -0.44
HERPUD1-214ENST00000568651 EVI5O60447 810 aa12.29□□□□□ -0.44
HERPUD1-214ENST00000568651 SLC34A2O95436 690 aa12.29□□□□□ -0.44
HERPUD1-214ENST00000568651 C7P10643 843 aa12.29□□□□□ -0.44
HERPUD1-214ENST00000568651 IL27Q8NEV9 243 aa12.29□□□□□ -0.44
HERPUD1-214ENST00000568651 COLQQ9Y215 455 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-214ENST00000568651 DCBLD2Q96PD2 775 aa12.28□□□□□ -0.44
HERPUD1-214ENST00000568651 DDRGK1Q96HY6 314 aa12.27□□□□□ -0.45
HERPUD1-214ENST00000568651 DDX12PQ92771 950 aa12.26□□□□□ -0.45
HERPUD1-214ENST00000568651 ANO8Q9HCE9 1232 aaPredicted RBP12.26□□□□□ -0.45
HERPUD1-214ENST00000568651 PTGDRQ13258 359 aa12.25□□□□□ -0.45
HERPUD1-214ENST00000568651 PELP1Q8IZL8 1130 aaKnown RBP12.25□□□□□ -0.45
HERPUD1-214ENST00000568651 MYO15BQ96JP2 1530 aa12.25□□□□□ -0.45
HERPUD1-214ENST00000568651 C3orf67Q6ZVT6 689 aa12.23□□□□□ -0.45
HERPUD1-214ENST00000568651 PARP9Q8IXQ6 854 aa12.22□□□□□ -0.45
HERPUD1-214ENST00000568651 EPAS1Q99814 870 aa12.21□□□□□ -0.45
HERPUD1-214ENST00000568651 POTEFA5A3E0 1075 aa12.2□□□□□ -0.46
HERPUD1-214ENST00000568651 FAM117AQ9C073 453 aa12.2□□□□□ -0.46
HERPUD1-214ENST00000568651 EIF4G1Q04637 1599 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-214ENST00000568651 PHF14O94880 888 aa12.19□□□□□ -0.46
HERPUD1-214ENST00000568651 PRIM1P49642 420 aaKnown RBP12.19□□□□□ -0.46
HERPUD1-214ENST00000568651 GOPCQ9HD26 462 aa12.19□□□□□ -0.46
HERPUD1-214ENST00000568651 FECHP22830 423 aa12.17□□□□□ -0.46
HERPUD1-214ENST00000568651 EN1Q05925 392 aaPredicted RBP12.17□□□□□ -0.46
HERPUD1-214ENST00000568651 METRNQ9UJH8 293 aa12.17□□□□□ -0.46
HERPUD1-214ENST00000568651 PLEKHG3A1L390 1219 aa12.16□□□□□ -0.46
HERPUD1-214ENST00000568651 SCRIBQ14160 1630 aa12.15□□□□□ -0.46
HERPUD1-214ENST00000568651 SHROOM4Q9ULL8 1493 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms