RNA–Protein interactions for RNA: ENST00000566215.5

UBE3A-205, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UBE3A, Length 3,176 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-205ENST00000566215 PREX2Q70Z35 1606 aa10.82□□□□□ -0.68
UBE3A-205ENST00000566215 LTBP4Q8N2S1 1624 aa10.82□□□□□ -0.68
UBE3A-205ENST00000566215 MLH3Q9UHC1 1453 aa10.82□□□□□ -0.68
UBE3A-205ENST00000566215 FAM9AQ8IZU1 332 aaPredicted RBP10.81□□□□□ -0.68
UBE3A-205ENST00000566215 DIP2CQ9Y2E4 1556 aa10.81□□□□□ -0.68
UBE3A-205ENST00000566215 NPATQ14207 1427 aa10.8□□□□□ -0.68
UBE3A-205ENST00000566215 SPATA31D1Q6ZQQ2 1576 aa10.79□□□□□ -0.68
UBE3A-205ENST00000566215 KIF14Q15058 1648 aa10.79□□□□□ -0.68
UBE3A-205ENST00000566215 ZNF518AQ6AHZ1 1483 aa10.79□□□□□ -0.68
UBE3A-205ENST00000566215 CNTLNQ9NXG0 1405 aa10.79□□□□□ -0.68
UBE3A-205ENST00000566215 YEATS2Q9ULM3 1422 aa10.78□□□□□ -0.68
UBE3A-205ENST00000566215 PLA2R1Q13018 1463 aa10.77□□□□□ -0.68
UBE3A-205ENST00000566215 PLXNC1O60486 1568 aa10.77□□□□□ -0.69
UBE3A-205ENST00000566215 CDC42BPBQ9Y5S2 1711 aa10.77□□□□□ -0.69
UBE3A-205ENST00000566215 ABCA6Q8N139 1617 aa10.76□□□□□ -0.69
UBE3A-205ENST00000566215 ABCC1P33527 1531 aa10.75□□□□□ -0.69
UBE3A-205ENST00000566215 DMRT2Q9Y5R5 561 aa10.75□□□□□ -0.69
UBE3A-205ENST00000566215 LRRIQ1Q96JM4 1722 aa10.74□□□□□ -0.69
UBE3A-205ENST00000566215 ADGBQ8N7X0 1667 aa10.73□□□□□ -0.69
UBE3A-205ENST00000566215 KIDINS220Q9ULH0 1771 aa10.72□□□□□ -0.69
UBE3A-205ENST00000566215 INO80Q9ULG1 1556 aaPredicted RBP10.72□□□□□ -0.69
UBE3A-205ENST00000566215 CCDC18Q5T9S5 1454 aa10.71□□□□□ -0.7
UBE3A-205ENST00000566215 NCOA1Q15788 1441 aa10.71□□□□□ -0.7
UBE3A-205ENST00000566215 FMN1Q68DA7 1419 aa10.71□□□□□ -0.7
UBE3A-205ENST00000566215 POLR1AO95602 1720 aaPredicted RBP10.71□□□□□ -0.7
UBE3A-205ENST00000566215 CERKQ8TCT0 537 aa10.71□□□□□ -0.7
UBE3A-205ENST00000566215 MYO3AQ8NEV4 1616 aa10.7□□□□□ -0.7
UBE3A-205ENST00000566215 SUPT5HO00267 1087 aaKnown RBP10.7□□□□□ -0.7
UBE3A-205ENST00000566215 CDC42BPAQ5VT25 1732 aa10.7□□□□□ -0.7
UBE3A-205ENST00000566215 DEPDC5O75140 1603 aa10.69□□□□□ -0.7
UBE3A-205ENST00000566215 UHRF1BP1Q6BDS2 1440 aa10.69□□□□□ -0.7
UBE3A-205ENST00000566215 TCOF1Q13428 1488 aaKnown RBP10.67□□□□□ -0.7
UBE3A-205ENST00000566215 TROQ12816 1431 aaPredicted RBP10.67□□□□□ -0.7
UBE3A-205ENST00000566215 TRAPPC8Q9Y2L5 1435 aa10.67□□□□□ -0.7
UBE3A-205ENST00000566215 CPS1P31327 1500 aa10.66□□□□□ -0.7
UBE3A-205ENST00000566215 SYNMO15061 1565 aa10.66□□□□□ -0.7
UBE3A-205ENST00000566215 SOCS7O14512 581 aa10.66□□□□□ -0.7
UBE3A-205ENST00000566215 PLEKHH2Q8IVE3 1493 aa10.65□□□□□ -0.7
UBE3A-205ENST00000566215 ZC3H13Q5T200 1668 aaKnown RBP10.65□□□□□ -0.71
UBE3A-205ENST00000566215 PPP6R1Q9UPN7 881 aa10.64□□□□□ -0.71
UBE3A-205ENST00000566215 SUPT6HQ7KZ85 1726 aaKnown RBP10.64□□□□□ -0.71
UBE3A-205ENST00000566215 KDM5AP29375 1690 aaKnown RBP10.64□□□□□ -0.71
UBE3A-205ENST00000566215 KIAA1107Q9UPP5 1409 aa10.64□□□□□ -0.71
UBE3A-205ENST00000566215 SAMD9LQ8IVG5 1584 aa10.64□□□□□ -0.71
UBE3A-205ENST00000566215 SCAPERQ9BY12 1400 aa10.64□□□□□ -0.71
UBE3A-205ENST00000566215 CLIP1P30622 1438 aa10.63□□□□□ -0.71
UBE3A-205ENST00000566215 PLEKHD1A6NEE1 506 aa10.62□□□□□ -0.71
UBE3A-205ENST00000566215 CEP170BQ9Y4F5 1589 aaPredicted RBP10.61□□□□□ -0.71
UBE3A-205ENST00000566215 FYCO1Q9BQS8 1478 aa10.59□□□□□ -0.71
UBE3A-205ENST00000566215 RAPGEF3O95398 923 aa10.59□□□□□ -0.71
UBE3A-205ENST00000566215 MED14O60244 1454 aa10.59□□□□□ -0.71
UBE3A-205ENST00000566215 CDK13Q14004 1512 aaKnown RBP10.59□□□□□ -0.71
UBE3A-205ENST00000566215 CASKIN1Q8WXD9 1431 aa10.59□□□□□ -0.71
UBE3A-205ENST00000566215 EIF2AK4Q9P2K8 1649 aaKnown RBP10.59□□□□□ -0.71
UBE3A-205ENST00000566215 CAMSAP1Q5T5Y3 1602 aa10.58□□□□□ -0.72
UBE3A-205ENST00000566215 RTEL1-TNFRSF6BF6WH68 1400 aa10.58□□□□□ -0.72
UBE3A-205ENST00000566215 CSRNP3Q8WYN3 585 aa10.58□□□□□ -0.72
UBE3A-205ENST00000566215 RNF17Q9BXT8 1623 aaKnown RBP10.58□□□□□ -0.72
UBE3A-205ENST00000566215 CAMSAP2Q08AD1 1489 aa10.58□□□□□ -0.72
UBE3A-205ENST00000566215 ARHGAP5Q13017 1502 aa10.58□□□□□ -0.72
UBE3A-205ENST00000566215 KCNH8Q96L42 1107 aa10.57□□□□□ -0.72
UBE3A-205ENST00000566215 ARHGAP35Q9NRY4 1499 aa10.57□□□□□ -0.72
UBE3A-205ENST00000566215 CLTCQ00610 1675 aaKnown RBP10.57□□□□□ -0.72
UBE3A-205ENST00000566215 NEURL4Q96JN8 1562 aa10.57□□□□□ -0.72
UBE3A-205ENST00000566215 EFCAB2Q5VUJ9 269 aa10.57□□□□□ -0.72
UBE3A-205ENST00000566215 ATP7AQ04656 1500 aa10.56□□□□□ -0.72
UBE3A-205ENST00000566215 MAST1Q9Y2H9 1570 aa10.56□□□□□ -0.72
UBE3A-205ENST00000566215 DNMT1P26358 1616 aaKnown RBP10.56□□□□□ -0.72
UBE3A-205ENST00000566215 A2ML1A8K2U0 1454 aa10.56□□□□□ -0.72
UBE3A-205ENST00000566215 KDM5DQ9BY66 1539 aa10.55□□□□□ -0.72
UBE3A-205ENST00000566215 PTPRKQ15262 1439 aa10.55□□□□□ -0.72
UBE3A-205ENST00000566215 PKD2Q13563 968 aa10.54□□□□□ -0.72
UBE3A-205ENST00000566215 VWDEQ8N2E2 1590 aa10.54□□□□□ -0.72
UBE3A-205ENST00000566215 ARHGEF5Q12774 1597 aa10.53□□□□□ -0.72
UBE3A-205ENST00000566215 MED1Q15648 1581 aaPredicted RBP10.53□□□□□ -0.72
UBE3A-205ENST00000566215 CDK11AQ9UQ88 783 aaPredicted RBP10.53□□□□□ -0.72
UBE3A-205ENST00000566215 ALKQ9UM73 1620 aa10.51□□□□□ -0.73
UBE3A-205ENST00000566215 NLRP1Q9C000 1473 aa10.51□□□□□ -0.73
UBE3A-205ENST00000566215 PZPP20742 1482 aa10.49□□□□□ -0.73
UBE3A-205ENST00000566215 IQGAP1P46940 1657 aa10.48□□□□□ -0.73
UBE3A-205ENST00000566215 A2MP01023 1474 aa10.48□□□□□ -0.73
UBE3A-205ENST00000566215 EHBP1L1Q8N3D4 1523 aa10.47□□□□□ -0.73
UBE3A-205ENST00000566215 GPATCH8Q9UKJ3 1502 aaKnown RBP10.47□□□□□ -0.73
UBE3A-205ENST00000566215 ARID4BQ4LE39 1312 aaPredicted RBP10.47□□□□□ -0.73
UBE3A-205ENST00000566215 SYCP2Q9BX26 1530 aa10.45□□□□□ -0.74
UBE3A-205ENST00000566215 TIAM1Q13009 1591 aa10.45□□□□□ -0.74
UBE3A-205ENST00000566215 DISP3Q9P2K9 1392 aa10.43□□□□□ -0.74
UBE3A-205ENST00000566215 NWD1Q149M9 1564 aa10.43□□□□□ -0.74
UBE3A-205ENST00000566215 SLIT1O75093 1534 aa10.43□□□□□ -0.74
UBE3A-205ENST00000566215 XIRP1Q702N8 1843 aaKnown RBP10.43□□□□□ -0.74
UBE3A-205ENST00000566215 NCOA2Q15596 1464 aa10.43□□□□□ -0.74
UBE3A-205ENST00000566215 MBD5Q9P267 1494 aa10.43□□□□□ -0.74
UBE3A-205ENST00000566215 SHANK2Q9UPX8 1470 aa10.42□□□□□ -0.74
UBE3A-205ENST00000566215 ZMYM3Q14202 1370 aa10.42□□□□□ -0.74
UBE3A-205ENST00000566215 TTBK1Q5TCY1 1321 aaPredicted RBP10.42□□□□□ -0.74
UBE3A-205ENST00000566215 UBR1Q8IWV7 1749 aa10.42□□□□□ -0.74
UBE3A-205ENST00000566215 CEP162Q5TB80 1403 aa10.42□□□□□ -0.74
UBE3A-205ENST00000566215 MAP3K1Q13233 1512 aa10.41□□□□□ -0.74
UBE3A-205ENST00000566215 STRCP1A6NGW2 1772 aa10.41□□□□□ -0.74
UBE3A-205ENST00000566215 ARHGAP23Q9P227 1491 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms