RNA–Protein interactions for RNA: ENST00000564288.5

MACF1-231, Transcript of microtubule-actin crosslinking factor 1, human

APPRIS ALT2 TSL 5 BASIC

Gene MACF1, Length 24,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MACF1-231	ENST00000564288	KIF21B	O75037	1637 aa		5.39	□□□□□ -1.55
MACF1-231	ENST00000564288	DDX11L8	A8MPP1	907 aa		5.39	□□□□□ -1.55
MACF1-231	ENST00000564288	DIAPH3	Q9NSV4	1193 aa		5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	TPM3	P06753	285 aa		5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	FRAT1	Q92837	279 aa	Predicted RBP	5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	FAM13B	Q9NYF5	915 aa		5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	TAF7L	Q5H9L4	462 aa		5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	CHMP5	Q9NZZ3	219 aa		5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	SYAP1	Q96A49	352 aa	Predicted RBP	5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	GPS2	Q13227	327 aa		5.38	□□□□□ -1.55
MACF1-231	ENST00000564288	GTPBP4	Q9BZE4	634 aa	Known RBP	5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	NRDC	O43847	1150 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288		A0A0U1RQG5	324 aa	Predicted RBP	5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	CENPQ	Q7L2Z9	268 aa	Predicted RBP	5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	TEX35	Q5T0J7	233 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	WASHC2A	Q641Q2	1341 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	WASHC2C	Q9Y4E1	1318 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	SCRIB	Q14160	1630 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	ESPN	B1AK53	854 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	RSPH4A	Q5TD94	716 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	PHF14	O94880	888 aa		5.37	□□□□□ -1.55
MACF1-231	ENST00000564288	NUDC	Q9Y266	331 aa		5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	BACH2	Q9BYV9	841 aa		5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	HTATSF1	O43719	755 aa	Known RBP	5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	CASC1	Q6TDU7	716 aa		5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	HS1BP3	Q53T59	392 aa		5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	LETM1	O95202	739 aa	Predicted RBP	5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	NOM1	Q5C9Z4	860 aa	Known RBP	5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	CCDC66	A2RUB6	948 aa		5.36	□□□□□ -1.55
MACF1-231	ENST00000564288	HSCB	Q8IWL3	235 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	NINL	Q9Y2I6	1382 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	CLCN1	P35523	988 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	CUX1	P39880	1505 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	KLHL34	Q8N239	644 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	GOLGA6L1	Q8N7Z2	621 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	TRAK2	O60296	914 aa		5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	EIF3A	Q14152	1382 aa	Known RBP	5.35	□□□□□ -1.55
MACF1-231	ENST00000564288	CLGN	O14967	610 aa		5.34	□□□□□ -1.55
MACF1-231	ENST00000564288	PMFBP1	Q8TBY8	1022 aa		5.34	□□□□□ -1.55
MACF1-231	ENST00000564288	IPO8	O15397	1037 aa	Known RBP	5.34	□□□□□ -1.55
MACF1-231	ENST00000564288	EFCAB5	A4FU69	1503 aa		5.34	□□□□□ -1.55
MACF1-231	ENST00000564288	PDIA4	P13667	645 aa	Known RBP	5.34	□□□□□ -1.55
MACF1-231	ENST00000564288	WDR43	Q15061	677 aa	Known RBP eCLIP	5.34	□□□□□ -1.56	3e-6	■■□□□ 14.2
MACF1-231	ENST00000564288	GZF1	Q9H116	711 aa	Predicted RBP	5.34	□□□□□ -1.56
MACF1-231	ENST00000564288	DYNC1I1	O14576	645 aa		5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	PAK3	O75914	559 aa	Predicted RBP	5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	DHX8	Q14562	1220 aa	Known RBP	5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	ZNF771	Q7L3S4	317 aa	Predicted RBP	5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	BRPF3	Q9ULD4	1205 aa		5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	INSR	P06213	1382 aa		5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	ANKRD30A	Q9BXX3	1397 aa		5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	HSP90AB1	P08238	724 aa	Known RBP	5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	RBM10	P98175	930 aa	Known RBP	5.33	□□□□□ -1.56
MACF1-231	ENST00000564288	MTUS2	Q5JR59	1369 aa		5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	PLEKHH2	Q8IVE3	1493 aa		5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	NUCB2	P80303	420 aa		5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	CCDC144A	A2RUR9	1427 aa		5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	KIF20A	O95235	890 aa		5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	CCDC39	Q9UFE4	941 aa		5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	CWC15	Q9P013	229 aa	Known RBP	5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	CAVIN1	Q6NZI2	390 aa	Known RBP	5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	CWC22	Q9HCG8	908 aa	Known RBP	5.32	□□□□□ -1.56
MACF1-231	ENST00000564288	CCDC173	Q0VFZ6	552 aa		5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	FGD1	P98174	961 aa		5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	CHMP4C	Q96CF2	233 aa		5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	SET	Q01105	290 aa	Predicted RBP	5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	DNAJC2	Q99543	621 aa	Known RBP	5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	ARHGAP35	Q9NRY4	1499 aa		5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	AXDND1	Q5T1B0	1012 aa	Predicted RBP	5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	BBX	Q8WY36	941 aa	Predicted RBP	5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	ZSCAN30	Q86W11	494 aa		5.31	□□□□□ -1.56
MACF1-231	ENST00000564288	KCNH8	Q96L42	1107 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	SMAP1	Q8IYB5	467 aa	Predicted RBP	5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	SETD5	Q9C0A6	1442 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	ROCK1	Q13464	1354 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	AQR	O60306	1485 aa	Known RBP eCLIP	5.3	□□□□□ -1.56	1e-6	■■■■■ 27
MACF1-231	ENST00000564288	ZBED9	Q6R2W3	1325 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	PEG3	Q9GZU2	1588 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	MAPK8IP3	Q9UPT6	1336 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	CNTLN	Q9NXG0	1405 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	UACA	Q9BZF9	1416 aa		5.3	□□□□□ -1.56
MACF1-231	ENST00000564288	MIA2	Q96PC5	1412 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	CTR9	Q6PD62	1173 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	ARX	Q96QS3	562 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	ZMYM3	Q14202	1370 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	RRBP1	Q9P2E9	1410 aa	Known RBP	5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	CUX2	O14529	1486 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	ZRSR1	Q15695	479 aa	Known RBP	5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	CIZ1	Q9ULV3	898 aa	Predicted RBP	5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	KNSTRN	Q9Y448	316 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	FYCO1	Q9BQS8	1478 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	ERCC6	Q03468	1493 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	DRC7	Q8IY82	874 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	DEF6	Q9H4E7	631 aa		5.29	□□□□□ -1.56
MACF1-231	ENST00000564288	MCM4	P33991	863 aa		5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	CALCOCO1	Q9P1Z2	691 aa		5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	KIF3A	Q9Y496	699 aa		5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	HMGB1	P09429	215 aa	Known RBP	5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	HIRIP3	Q9BW71	556 aa	Predicted RBP	5.28	□□□□□ -1.56
MACF1-231	ENST00000564288	HMGXB3	Q12766	1538 aa		5.28	□□□□□ -1.56

Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms